RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 SLC22A24Q8N4F4 322 aa3.09□□□□□ -1.91
VPS41-212ENST00000482217 TCTEX1D1Q8N7M0 179 aa3.09□□□□□ -1.91
VPS41-212ENST00000482217 OR51A4Q8NGJ6 313 aa3.09□□□□□ -1.91
VPS41-212ENST00000482217 OR52P1PQ8NH57 321 aa3.09□□□□□ -1.91
VPS41-212ENST00000482217 CMBLQ96DG6 245 aa3.09□□□□□ -1.91
VPS41-212ENST00000482217 MALSU1Q96EH3 234 aa3.09□□□□□ -1.91
VPS41-212ENST00000482217 PHYHIPLQ96FC7 376 aa3.09□□□□□ -1.91
VPS41-212ENST00000482217 C18orf15Q96N68 181 aa3.09□□□□□ -1.91
VPS41-212ENST00000482217 PSMG3Q9BT73 122 aaPredicted RBP3.09□□□□□ -1.91
VPS41-212ENST00000482217 TMEM243Q9BU79 118 aa3.09□□□□□ -1.91
VPS41-212ENST00000482217 ZBP1Q9H171 429 aa3.09□□□□□ -1.91
VPS41-212ENST00000482217 DEFB127Q9H1M4 99 aa3.09□□□□□ -1.91
VPS41-212ENST00000482217 POMPQ9Y244 141 aa3.09□□□□□ -1.91
VPS41-212ENST00000482217 F11RQ9Y624 299 aaKnown RBP3.09□□□□□ -1.91
VPS41-212ENST00000482217 ARHGEF11O15085 1522 aa3.09□□□□□ -1.92
VPS41-212ENST00000482217 ANKRD26Q9UPS8 1709 aa3.08□□□□□ -1.92
VPS41-212ENST00000482217 CCDC88AQ3V6T2 1871 aa3.08□□□□□ -1.92
VPS41-212ENST00000482217 IGHV2-26A0A0B4J1V2 119 aa3.08□□□□□ -1.92
VPS41-212ENST00000482217 CCL15-CCL14A0A0B4J2E2 113 aa3.08□□□□□ -1.92
VPS41-212ENST00000482217 OR4C45A6NMZ5 311 aa3.08□□□□□ -1.92
VPS41-212ENST00000482217 J3QQQ9 107 aa3.08□□□□□ -1.92
VPS41-212ENST00000482217 M0R381 172 aa3.08□□□□□ -1.92
VPS41-212ENST00000482217 AIPO00170 330 aa3.08□□□□□ -1.92
VPS41-212ENST00000482217 CECR9P0C854 216 aa3.08□□□□□ -1.92
VPS41-212ENST00000482217 OR12D1P0DN82 309 aa3.08□□□□□ -1.92
VPS41-212ENST00000482217 NDUFV3P56181 108 aaKnown RBP3.08□□□□□ -1.92
VPS41-212ENST00000482217 LINC00313P59037 77 aa3.08□□□□□ -1.92
VPS41-212ENST00000482217 ERVK-16P61578 105 aa3.08□□□□□ -1.92
VPS41-212ENST00000482217 CDK6Q00534 326 aa3.08□□□□□ -1.92
VPS41-212ENST00000482217 LOXL1Q08397 574 aaPredicted RBP3.08□□□□□ -1.92
VPS41-212ENST00000482217 ZNF141Q15928 474 aa3.08□□□□□ -1.92
VPS41-212ENST00000482217 HES3Q5TGS1 186 aa3.08□□□□□ -1.92
VPS41-212ENST00000482217 FKBP1CQ5VVH2 108 aa3.08□□□□□ -1.92
VPS41-212ENST00000482217 NXNL2Q5VZ03 156 aa3.08□□□□□ -1.92
VPS41-212ENST00000482217 GLYATQ6IB77 296 aa3.08□□□□□ -1.92
VPS41-212ENST00000482217 CROCCP2Q86T23 111 aa3.08□□□□□ -1.92
VPS41-212ENST00000482217 ZNF664Q8N3J9 261 aa3.08□□□□□ -1.92
VPS41-212ENST00000482217 ZDHHC22Q8N966 263 aa3.08□□□□□ -1.92
VPS41-212ENST00000482217 OR51T1Q8NGJ9 327 aa3.08□□□□□ -1.92
VPS41-212ENST00000482217 KCNS1Q96KK3 526 aa3.08□□□□□ -1.92
VPS41-212ENST00000482217 PAXXQ9BUH6 204 aa3.08□□□□□ -1.92
VPS41-212ENST00000482217 SAMD10Q9BYL1 202 aa3.08□□□□□ -1.92
VPS41-212ENST00000482217 MARCH5Q9NX47 278 aa3.08□□□□□ -1.92
VPS41-212ENST00000482217 METTL1Q9UBP6 276 aaKnown RBP3.08□□□□□ -1.92
VPS41-212ENST00000482217 BOKQ9UMX3 212 aaPredicted RBP3.08□□□□□ -1.92
VPS41-212ENST00000482217 HEBP2Q9Y5Z4 205 aa3.08□□□□□ -1.92
VPS41-212ENST00000482217 ENPP4Q9Y6X5 453 aa3.08□□□□□ -1.92
VPS41-212ENST00000482217 MYH6P13533 1939 aa3.08□□□□□ -1.92
VPS41-212ENST00000482217 DCCP43146 1447 aa3.08□□□□□ -1.92
VPS41-212ENST00000482217 ARHGAP31Q2M1Z3 1444 aa3.08□□□□□ -1.92
VPS41-212ENST00000482217 BCL9LQ86UU0 1499 aa3.08□□□□□ -1.92
VPS41-212ENST00000482217 CUL7Q14999 1698 aa3.08□□□□□ -1.92
VPS41-212ENST00000482217 PSME4Q14997 1843 aa3.07□□□□□ -1.92
VPS41-212ENST00000482217 TRDV1A0A1B0GX56 115 aa3.07□□□□□ -1.92
VPS41-212ENST00000482217 MPTX1A8MV57 137 aa3.07□□□□□ -1.92
VPS41-212ENST00000482217 GABARAPH6UMI1 98 aa3.07□□□□□ -1.92
VPS41-212ENST00000482217 DNASE2O00115 360 aaPredicted RBP3.07□□□□□ -1.92
VPS41-212ENST00000482217 UPK2O00526 184 aa3.07□□□□□ -1.92
VPS41-212ENST00000482217 IGLV1-44P01699 117 aa3.07□□□□□ -1.92
VPS41-212ENST00000482217 HLA-DQB2P05538 268 aa3.07□□□□□ -1.92
VPS41-212ENST00000482217 IGLC6P0CF74 106 aa3.07□□□□□ -1.92
VPS41-212ENST00000482217 CFC1BP0CG36 223 aa3.07□□□□□ -1.92
VPS41-212ENST00000482217 CFC1P0CG37 223 aa3.07□□□□□ -1.92
VPS41-212ENST00000482217 RPS4Y1P22090 263 aaKnown RBP3.07□□□□□ -1.92
VPS41-212ENST00000482217 BRS3P32247 399 aa3.07□□□□□ -1.92
VPS41-212ENST00000482217 GABRA3P34903 492 aa3.07□□□□□ -1.92
VPS41-212ENST00000482217 PSMB3P49720 205 aa3.07□□□□□ -1.92
VPS41-212ENST00000482217 P2RX1P51575 399 aa3.07□□□□□ -1.92
VPS41-212ENST00000482217 RBM11P57052 281 aaKnown RBP3.07□□□□□ -1.92
VPS41-212ENST00000482217 KRTAP10-6P60371 365 aaPredicted RBP3.07□□□□□ -1.92
VPS41-212ENST00000482217 COPZ1P61923 177 aa3.07□□□□□ -1.92
VPS41-212ENST00000482217 PPP1CAP62136 330 aa3.07□□□□□ -1.92
VPS41-212ENST00000482217 FKBP1AP62942 108 aaKnown RBP3.07□□□□□ -1.92
VPS41-212ENST00000482217 FABP9Q0Z7S8 132 aa3.07□□□□□ -1.92
VPS41-212ENST00000482217 EIF3IQ13347 325 aaKnown RBP3.07□□□□□ -1.92
VPS41-212ENST00000482217 CST6Q15828 149 aa3.07□□□□□ -1.92
VPS41-212ENST00000482217 FBXL19-AS1Q494R0 122 aa3.07□□□□□ -1.92
VPS41-212ENST00000482217 CLLU1OSQ5K130 101 aa3.07□□□□□ -1.92
VPS41-212ENST00000482217 GLT8D1Q68CQ7 371 aa3.07□□□□□ -1.92
VPS41-212ENST00000482217 SHISA6Q6ZSJ9 500 aa3.07□□□□□ -1.92
VPS41-212ENST00000482217 ZNF329Q86UD4 541 aa3.07□□□□□ -1.92
VPS41-212ENST00000482217 TMEM61Q8N0U2 210 aa3.07□□□□□ -1.92
VPS41-212ENST00000482217 MMGT1Q8N4V1 131 aa3.07□□□□□ -1.92
VPS41-212ENST00000482217 OR4C16Q8NGL9 310 aa3.07□□□□□ -1.92
VPS41-212ENST00000482217 OR5K1Q8NHB7 308 aa3.07□□□□□ -1.92
VPS41-212ENST00000482217 SLAMF6Q96DU3 332 aa3.07□□□□□ -1.92
VPS41-212ENST00000482217 ATXN7L3BQ96GX2 97 aa3.07□□□□□ -1.92
VPS41-212ENST00000482217 LITAFQ99732 161 aa3.07□□□□□ -1.92
VPS41-212ENST00000482217 MRPL57Q9BQC6 102 aaKnown RBP3.07□□□□□ -1.92
VPS41-212ENST00000482217 ADAT1Q9BUB4 502 aaKnown RBP3.07□□□□□ -1.92
VPS41-212ENST00000482217 TMEM70Q9BUB7 260 aa3.07□□□□□ -1.92
VPS41-212ENST00000482217 SFXN3Q9BWM7 321 aa3.07□□□□□ -1.92
VPS41-212ENST00000482217 CLEC7AQ9BXN2 247 aa3.07□□□□□ -1.92
VPS41-212ENST00000482217 C11orf68Q9H3H3 251 aaKnown RBP3.07□□□□□ -1.92
VPS41-212ENST00000482217 MOB1AQ9H8S9 216 aa3.07□□□□□ -1.92
VPS41-212ENST00000482217 ZNF702PQ9H963 129 aa3.07□□□□□ -1.92
VPS41-212ENST00000482217 EFCAB1Q9HAE3 211 aa3.07□□□□□ -1.92
VPS41-212ENST00000482217 TMEM216Q9P0N5 145 aa3.07□□□□□ -1.92
VPS41-212ENST00000482217 LINC00527Q9UJ94 153 aa3.07□□□□□ -1.92
VPS41-212ENST00000482217 PCTPQ9UKL6 214 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms