RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 FOXD3Q9UJU5 478 aaPredicted RBP8.25□□□□□ -1.09
VEGFA-212ENST00000480614 H3BRM9 83 aa8.25□□□□□ -1.09
VEGFA-212ENST00000480614 ISG15P05161 165 aa8.25□□□□□ -1.09
VEGFA-212ENST00000480614 ANOS1P23352 680 aa8.25□□□□□ -1.09
VEGFA-212ENST00000480614 CX3CL1P78423 397 aa8.25□□□□□ -1.09
VEGFA-212ENST00000480614 TCF21O43680 179 aa8.25□□□□□ -1.09
VEGFA-212ENST00000480614 C2orf83Q53S99 150 aa8.25□□□□□ -1.09
VEGFA-212ENST00000480614 NCMAPQ5T1S8 102 aa8.25□□□□□ -1.09
VEGFA-212ENST00000480614 DNM1P46Q6ZS02 220 aa8.25□□□□□ -1.09
VEGFA-212ENST00000480614 ZNF721Q8TF20 911 aa8.25□□□□□ -1.09
VEGFA-212ENST00000480614 GPR82Q96P67 336 aa8.25□□□□□ -1.09
VEGFA-212ENST00000480614 COL9A1P20849 921 aa8.25□□□□□ -1.09
VEGFA-212ENST00000480614 MPV17P39210 176 aa8.25□□□□□ -1.09
VEGFA-212ENST00000480614 TMEM101Q96IK0 257 aa8.25□□□□□ -1.09
VEGFA-212ENST00000480614 NPIPB11E5RHQ5 1161 aa8.25□□□□□ -1.09
VEGFA-212ENST00000480614 GPX1P07203 203 aa8.25□□□□□ -1.09
VEGFA-212ENST00000480614 FCARP24071 287 aa8.25□□□□□ -1.09
VEGFA-212ENST00000480614 RPS11P62280 158 aaKnown RBP eCLIP8.25□□□□□ -1.09
VEGFA-212ENST00000480614 OR9G1Q8NH87 305 aa8.25□□□□□ -1.09
VEGFA-212ENST00000480614 COX5BP10606 129 aa8.25□□□□□ -1.09
VEGFA-212ENST00000480614 TMEM190Q8WZ59 177 aa8.25□□□□□ -1.09
VEGFA-212ENST00000480614 UCN2Q96RP3 112 aa8.25□□□□□ -1.09
VEGFA-212ENST00000480614 APELAP0DMC3 54 aa8.25□□□□□ -1.09
VEGFA-212ENST00000480614 OR51G1Q8NGK1 321 aa8.25□□□□□ -1.09
VEGFA-212ENST00000480614 SPSB4Q96A44 273 aa8.25□□□□□ -1.09
VEGFA-212ENST00000480614 GREB1LQ9C091 1923 aaPredicted RBP8.25□□□□□ -1.09
VEGFA-212ENST00000480614 TRAV8-7A0A075B6U6 113 aa8.24□□□□□ -1.09
VEGFA-212ENST00000480614 RBKSQ9H477 322 aa8.24□□□□□ -1.09
VEGFA-212ENST00000480614 GDF9O60383 454 aa8.24□□□□□ -1.09
VEGFA-212ENST00000480614 FAM214BQ7L5A3 538 aa8.24□□□□□ -1.09
VEGFA-212ENST00000480614 FAM131CQ96AQ9 280 aa8.24□□□□□ -1.09
VEGFA-212ENST00000480614 CISD1Q9NZ45 108 aaKnown RBP8.24□□□□□ -1.09
VEGFA-212ENST00000480614 IGF2P01344 180 aa8.24□□□□□ -1.09
VEGFA-212ENST00000480614 RNF224P0DH78 156 aa8.24□□□□□ -1.09
VEGFA-212ENST00000480614 COL11A2P13942 1736 aaPredicted RBP8.24□□□□□ -1.09
VEGFA-212ENST00000480614 SAPCD1Q5SSQ6 148 aa8.24□□□□□ -1.09
VEGFA-212ENST00000480614 ARL14EPLP0DKL9 152 aa8.24□□□□□ -1.09
VEGFA-212ENST00000480614 MEIG1Q5JSS6 88 aa8.24□□□□□ -1.09
VEGFA-212ENST00000480614 ZNF414Q96IQ9 312 aa8.24□□□□□ -1.09
VEGFA-212ENST00000480614 PSMG3Q9BT73 122 aaPredicted RBP8.24□□□□□ -1.09
VEGFA-212ENST00000480614 REG1BP48304 166 aa8.24□□□□□ -1.09
VEGFA-212ENST00000480614 ISOC2Q96AB3 205 aa8.24□□□□□ -1.09
VEGFA-212ENST00000480614 CTSSP25774 331 aa8.24□□□□□ -1.09
VEGFA-212ENST00000480614 LEMD1Q68G75 181 aa8.24□□□□□ -1.09
VEGFA-212ENST00000480614 SMRP1Q8NCR6 262 aa8.24□□□□□ -1.09
VEGFA-212ENST00000480614 IDI2-AS1Q9NZ38 188 aa8.24□□□□□ -1.09
VEGFA-212ENST00000480614 ST6GALNAC2Q9UJ37 374 aa8.24□□□□□ -1.09
VEGFA-212ENST00000480614 MEX3AA1L020 520 aaKnown RBP8.24□□□□□ -1.09
VEGFA-212ENST00000480614 ZNF729A6NN14 1252 aaPredicted RBP8.24□□□□□ -1.09
VEGFA-212ENST00000480614 UCP2P55851 309 aa8.24□□□□□ -1.09
VEGFA-212ENST00000480614 RNFT1Q5M7Z0 435 aa8.24□□□□□ -1.09
VEGFA-212ENST00000480614 UNQ9370/PRO34162Q6UXP9 181 aa8.24□□□□□ -1.09
VEGFA-212ENST00000480614 ZCCHC14Q8WYQ9 949 aaKnown RBP8.24□□□□□ -1.09
VEGFA-212ENST00000480614 NPFFO15130 113 aa8.24□□□□□ -1.09
VEGFA-212ENST00000480614 ZNF205O95201 554 aa8.24□□□□□ -1.09
VEGFA-212ENST00000480614 TMEM186Q96B77 213 aa8.24□□□□□ -1.09
VEGFA-212ENST00000480614 A0A0G2JLM5 398 aa8.24□□□□□ -1.09
VEGFA-212ENST00000480614 JKAMPQ9P055 326 aa8.24□□□□□ -1.09
VEGFA-212ENST00000480614 NDUFB4O95168 129 aa8.23□□□□□ -1.09
VEGFA-212ENST00000480614 LEPROTL1O95214 131 aa8.23□□□□□ -1.09
VEGFA-212ENST00000480614 CXCL3P19876 107 aa8.23□□□□□ -1.09
VEGFA-212ENST00000480614 ZNF56Q15929 161 aa8.23□□□□□ -1.09
VEGFA-212ENST00000480614 CLEC7AQ9BXN2 247 aa8.23□□□□□ -1.09
VEGFA-212ENST00000480614 WBP1LQ9NX94 342 aa8.23□□□□□ -1.09
VEGFA-212ENST00000480614 PRR13Q9NZ81 148 aa8.23□□□□□ -1.09
VEGFA-212ENST00000480614 YBX2Q9Y2T7 364 aaKnown RBP8.23□□□□□ -1.09
VEGFA-212ENST00000480614 WDR87Q6ZQQ6 2873 aa8.23□□□□□ -1.09
VEGFA-212ENST00000480614 FOXH1O75593 365 aa8.23□□□□□ -1.09
VEGFA-212ENST00000480614 SLC25A53Q5H9E4 307 aa8.23□□□□□ -1.09
VEGFA-212ENST00000480614 NUDT10Q8NFP7 164 aa8.23□□□□□ -1.09
VEGFA-212ENST00000480614 OR1P1Q8NH06 330 aa8.23□□□□□ -1.09
VEGFA-212ENST00000480614 CLDND2Q8NHS1 167 aa8.23□□□□□ -1.09
VEGFA-212ENST00000480614 SFRP2Q96HF1 295 aa8.23□□□□□ -1.09
VEGFA-212ENST00000480614 NPBWR2P48146 333 aa8.23□□□□□ -1.09
VEGFA-212ENST00000480614 ATP5J2P56134 94 aa8.23□□□□□ -1.09
VEGFA-212ENST00000480614 C10orf126Q8N4M7 172 aa8.23□□□□□ -1.09
VEGFA-212ENST00000480614 DCTN5Q9BTE1 182 aa8.23□□□□□ -1.09
VEGFA-212ENST00000480614 HILPDAQ9Y5L2 63 aa8.23□□□□□ -1.09
VEGFA-212ENST00000480614 ZNF146Q15072 292 aa8.23□□□□□ -1.09
VEGFA-212ENST00000480614 SMIM8Q96KF7 97 aa8.23□□□□□ -1.09
VEGFA-212ENST00000480614 PGLYRP4Q96LB8 373 aa8.23□□□□□ -1.09
VEGFA-212ENST00000480614 DUX5Q96PT3 197 aa8.23□□□□□ -1.09
VEGFA-212ENST00000480614 CCL13Q99616 98 aa8.23□□□□□ -1.09
VEGFA-212ENST00000480614 HIVEP2P31629 2446 aa8.23□□□□□ -1.09
VEGFA-212ENST00000480614 ASAH2BP0C7U1 165 aa8.23□□□□□ -1.09
VEGFA-212ENST00000480614 KLK13Q9UKR3 277 aa8.23□□□□□ -1.09
VEGFA-212ENST00000480614 SYNGR3O43761 229 aa8.23□□□□□ -1.09
VEGFA-212ENST00000480614 LRTM2Q8N967 370 aa8.23□□□□□ -1.09
VEGFA-212ENST00000480614 OR8G5Q8NG78 346 aa8.23□□□□□ -1.09
VEGFA-212ENST00000480614 PRSS27Q9BQR3 290 aa8.23□□□□□ -1.09
VEGFA-212ENST00000480614 CALYQ9NYX4 217 aa8.23□□□□□ -1.09
VEGFA-212ENST00000480614 ELOVL5Q9NYP7 299 aa8.23□□□□□ -1.09
VEGFA-212ENST00000480614 DSCAML1Q8TD84 2053 aa8.23□□□□□ -1.09
VEGFA-212ENST00000480614 CEP192Q8TEP8 1941 aa8.22□□□□□ -1.09
VEGFA-212ENST00000480614 SUMO2P61956 95 aaKnown RBP8.22□□□□□ -1.09
VEGFA-212ENST00000480614 OR11H7Q8NGC8 314 aa8.22□□□□□ -1.09
VEGFA-212ENST00000480614 FAM216AQ8WUB2 273 aa8.22□□□□□ -1.09
VEGFA-212ENST00000480614 TAF15Q92804 592 aaKnown RBP eCLIP8.22□□□□□ -1.09
VEGFA-212ENST00000480614 NPIPB13A6NJU9 1138 aa8.22□□□□□ -1.09
VEGFA-212ENST00000480614 NPIPB4C9JG80 1138 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms