RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 C1RLQ9NZP8 487 aa8.92□□□□□ -0.98
SIK3-210ENST00000480468 YTHDF2Q9Y5A9 579 aaKnown RBP8.92□□□□□ -0.98
SIK3-210ENST00000480468 IGHV3-15A0A0B4J1V0 119 aa8.91□□□□□ -0.98
SIK3-210ENST00000480468 FAM181BA6NEQ2 426 aa8.91□□□□□ -0.98
SIK3-210ENST00000480468 RAB29O14966 203 aa8.91□□□□□ -0.98
SIK3-210ENST00000480468 DNPH1O43598 174 aa8.91□□□□□ -0.98
SIK3-210ENST00000480468 ZG16O60844 167 aa8.91□□□□□ -0.98
SIK3-210ENST00000480468 MRPS21P82921 87 aaKnown RBP8.91□□□□□ -0.98
SIK3-210ENST00000480468 LCN12Q6JVE5 192 aa8.91□□□□□ -0.98
SIK3-210ENST00000480468 RASL11AQ6T310 242 aa8.91□□□□□ -0.98
SIK3-210ENST00000480468 SHISA6Q6ZSJ9 500 aa8.91□□□□□ -0.98
SIK3-210ENST00000480468 ATOH7Q8N100 152 aa8.91□□□□□ -0.98
SIK3-210ENST00000480468 IL1F10Q8WWZ1 152 aa8.91□□□□□ -0.98
SIK3-210ENST00000480468 MT-CO2P00403 227 aa8.9□□□□□ -0.98
SIK3-210ENST00000480468 CA3P07451 260 aa8.9□□□□□ -0.98
SIK3-210ENST00000480468 GCHFRP30047 84 aa8.9□□□□□ -0.98
SIK3-210ENST00000480468 GPM6AP51674 278 aa8.9□□□□□ -0.98
SIK3-210ENST00000480468 EDDM3BP56851 147 aa8.9□□□□□ -0.98
SIK3-210ENST00000480468 UBE2G1P62253 170 aa8.9□□□□□ -0.98
SIK3-210ENST00000480468 HLA-BQ31612 363 aa8.9□□□□□ -0.98
SIK3-210ENST00000480468 BVES-AS1Q5T3Y7 98 aa8.9□□□□□ -0.98
SIK3-210ENST00000480468 VHLLQ6RSH7 139 aa8.9□□□□□ -0.98
SIK3-210ENST00000480468 PARM1Q6UWI2 310 aa8.9□□□□□ -0.98
SIK3-210ENST00000480468 TMEM92Q6UXU6 159 aa8.9□□□□□ -0.98
SIK3-210ENST00000480468 C12orf54Q6X4T0 127 aa8.9□□□□□ -0.98
SIK3-210ENST00000480468 FAM19A2Q8N3H0 131 aa8.9□□□□□ -0.98
SIK3-210ENST00000480468 ZNF596Q8TC21 504 aa8.9□□□□□ -0.98
SIK3-210ENST00000480468 C18orf32Q8TCD1 76 aa8.9□□□□□ -0.98
SIK3-210ENST00000480468 WIPF2Q8TF74 440 aaPredicted RBP8.9□□□□□ -0.98
SIK3-210ENST00000480468 OR2D2Q9H210 308 aa8.9□□□□□ -0.98
SIK3-210ENST00000480468 DLL3Q9NYJ7 618 aa8.9□□□□□ -0.98
SIK3-210ENST00000480468 RPH3ALQ9UNE2 315 aa8.9□□□□□ -0.98
SIK3-210ENST00000480468 CHD7Q9P2D1 2997 aa8.9□□□□□ -0.98
SIK3-210ENST00000480468 DNAH14Q0VDD8 3507 aa8.9□□□□□ -0.98
SIK3-210ENST00000480468 MED12Q93074 2177 aa8.9□□□□□ -0.98
SIK3-210ENST00000480468 XIRP2A4UGR9 3374 aa8.9□□□□□ -0.98
SIK3-210ENST00000480468 TNRC6AQ8NDV7 1962 aaKnown RBP8.9□□□□□ -0.98
SIK3-210ENST00000480468 TNRC6BQ9UPQ9 1833 aaKnown RBP8.9□□□□□ -0.98
SIK3-210ENST00000480468 C15orf62A8K5M9 175 aa8.9□□□□□ -0.98
SIK3-210ENST00000480468 RRHO14718 337 aa8.9□□□□□ -0.98
SIK3-210ENST00000480468 CLDN14O95500 239 aa8.9□□□□□ -0.98
SIK3-210ENST00000480468 APCSP02743 223 aa8.9□□□□□ -0.98
SIK3-210ENST00000480468 RAC2P15153 192 aa8.9□□□□□ -0.98
SIK3-210ENST00000480468 B4GALT1P15291 398 aa8.9□□□□□ -0.98
SIK3-210ENST00000480468 GABRG2P18507 467 aa8.9□□□□□ -0.98
SIK3-210ENST00000480468 NTF3P20783 257 aa8.9□□□□□ -0.98
SIK3-210ENST00000480468 REG1BP48304 166 aa8.9□□□□□ -0.98
SIK3-210ENST00000480468 KLF5Q13887 457 aaPredicted RBP8.9□□□□□ -0.98
SIK3-210ENST00000480468 KIAA1644Q3SXP7 199 aa8.9□□□□□ -0.98
SIK3-210ENST00000480468 C19orf25Q9UFG5 118 aaPredicted RBP8.9□□□□□ -0.98
SIK3-210ENST00000480468 TMEM238LA0A1B0GVL6 79 aa8.89□□□□□ -0.99
SIK3-210ENST00000480468 SMIM27A0A1W2PRY6 76 aa8.89□□□□□ -0.99
SIK3-210ENST00000480468 GAGE12BA1L429 117 aa8.89□□□□□ -0.99
SIK3-210ENST00000480468 C2orf70A6NJV1 201 aa8.89□□□□□ -0.99
SIK3-210ENST00000480468 CORTO00230 105 aa8.89□□□□□ -0.99
SIK3-210ENST00000480468 ISLRO14498 428 aa8.89□□□□□ -0.99
SIK3-210ENST00000480468 CD5LO43866 347 aa8.89□□□□□ -0.99
SIK3-210ENST00000480468 TNFSF15O95150 251 aa8.89□□□□□ -0.99
SIK3-210ENST00000480468 HLA-DRB1P01911 266 aa8.89□□□□□ -0.99
SIK3-210ENST00000480468 PATE4P0C8F1 98 aa8.89□□□□□ -0.99
SIK3-210ENST00000480468 G6PCP35575 357 aa8.89□□□□□ -0.99
SIK3-210ENST00000480468 EIF4EBP1Q13541 118 aaPredicted RBP8.89□□□□□ -0.99
SIK3-210ENST00000480468 IGFBP7Q16270 282 aa8.89□□□□□ -0.99
SIK3-210ENST00000480468 MPV17L2Q567V2 206 aa8.89□□□□□ -0.99
SIK3-210ENST00000480468 FOXB1Q99853 325 aa8.89□□□□□ -0.99
SIK3-210ENST00000480468 KCNIP1Q9NZI2 227 aa8.89□□□□□ -0.99
SIK3-210ENST00000480468 G3V3Y1 287 aa8.89□□□□□ -0.99
SIK3-210ENST00000480468 CRXO43186 299 aaPredicted RBP8.89□□□□□ -0.99
SIK3-210ENST00000480468 IGLV3-19P01714 112 aa8.89□□□□□ -0.99
SIK3-210ENST00000480468 GNG4P50150 75 aa8.89□□□□□ -0.99
SIK3-210ENST00000480468 TMPRSS3P57727 454 aa8.89□□□□□ -0.99
SIK3-210ENST00000480468 FOXL2P58012 376 aa8.89□□□□□ -0.99
SIK3-210ENST00000480468 CATR1Q13166 79 aa8.89□□□□□ -0.99
SIK3-210ENST00000480468 SPATA46Q5T0L3 261 aa8.89□□□□□ -0.99
SIK3-210ENST00000480468 EBLN2Q6P2I7 272 aa8.89□□□□□ -0.99
SIK3-210ENST00000480468 ZNF645Q8N7E2 425 aa8.89□□□□□ -0.99
SIK3-210ENST00000480468 WDR31Q8NA23 367 aa8.89□□□□□ -0.99
SIK3-210ENST00000480468 OR52L2PQ8NGH6 319 aa8.89□□□□□ -0.99
SIK3-210ENST00000480468 NEUROG1Q92886 237 aa8.89□□□□□ -0.99
SIK3-210ENST00000480468 NINJ1Q92982 152 aa8.89□□□□□ -0.99
SIK3-210ENST00000480468 ZDHHC16Q969W1 377 aa8.89□□□□□ -0.99
SIK3-210ENST00000480468 RNF208Q9H0X6 261 aa8.89□□□□□ -0.99
SIK3-210ENST00000480468 IL19Q9UHD0 177 aa8.89□□□□□ -0.99
SIK3-210ENST00000480468 CHCHD2Q9Y6H1 151 aaPredicted RBP8.89□□□□□ -0.99
SIK3-210ENST00000480468 C5orf42Q9H799 3197 aa8.89□□□□□ -0.99
SIK3-210ENST00000480468 ZNF407Q9C0G0 2248 aa8.89□□□□□ -0.99
SIK3-210ENST00000480468 KIAA1549Q9HCM3 1950 aa8.88□□□□□ -0.99
SIK3-210ENST00000480468 TMEM265A0A087WTH1 108 aa8.88□□□□□ -0.99
SIK3-210ENST00000480468 OR2T8A6NH00 312 aa8.88□□□□□ -0.99
SIK3-210ENST00000480468 M0R1X1 148 aa8.88□□□□□ -0.99
SIK3-210ENST00000480468 SYNGR1O43759 233 aa8.88□□□□□ -0.99
SIK3-210ENST00000480468 HSBP1O75506 76 aa8.88□□□□□ -0.99
SIK3-210ENST00000480468 NPY1RP25929 384 aa8.88□□□□□ -0.99
SIK3-210ENST00000480468 PDLIM3Q53GG5 364 aaPredicted RBP8.88□□□□□ -0.99
SIK3-210ENST00000480468 Q56UQ5 140 aa8.88□□□□□ -0.99
SIK3-210ENST00000480468 AMMECR1LQ6DCA0 310 aa8.88□□□□□ -0.99
SIK3-210ENST00000480468 ZNF497Q6ZNH5 498 aa8.88□□□□□ -0.99
SIK3-210ENST00000480468 GGTLC1Q9BX51 225 aa8.88□□□□□ -0.99
SIK3-210ENST00000480468 GTF3C1Q12789 2109 aa8.88□□□□□ -0.99
SIK3-210ENST00000480468 A0A1W2PPC4 97 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms