RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 FAM219AQ8IW50 185 aa14.13□□□□□ -0.15
UPF3A-206ENST00000480362 RHOVQ96L33 236 aa14.13□□□□□ -0.15
UPF3A-206ENST00000480362 MS4A7Q9GZW8 240 aaPredicted RBP14.13□□□□□ -0.15
UPF3A-206ENST00000480362 MEGF9Q9H1U4 602 aa14.13□□□□□ -0.15
UPF3A-206ENST00000480362 RANBP3Q9H6Z4 567 aaPredicted RBP14.13□□□□□ -0.15
UPF3A-206ENST00000480362 GSKIPQ9P0R6 139 aa14.13□□□□□ -0.15
UPF3A-206ENST00000480362 FAM96BQ9Y3D0 163 aa14.13□□□□□ -0.15
UPF3A-206ENST00000480362 A0A1B0GU03 582 aa14.12□□□□□ -0.15
UPF3A-206ENST00000480362 SNRNP70P08621 437 aaKnown RBP14.12□□□□□ -0.15
UPF3A-206ENST00000480362 P0C879 139 aa14.12□□□□□ -0.15
UPF3A-206ENST00000480362 BRS3P32247 399 aa14.12□□□□□ -0.15
UPF3A-206ENST00000480362 RAP2BP61225 183 aa14.12□□□□□ -0.15
UPF3A-206ENST00000480362 CYCSP99999 105 aaKnown RBP14.12□□□□□ -0.15
UPF3A-206ENST00000480362 POU2AF1Q16633 256 aa14.12□□□□□ -0.15
UPF3A-206ENST00000480362 THOC7Q6I9Y2 204 aaKnown RBP14.12□□□□□ -0.15
UPF3A-206ENST00000480362 ZBTB8BQ8NAP8 495 aaPredicted RBP14.12□□□□□ -0.15
UPF3A-206ENST00000480362 SPIN2AQ99865 258 aa14.12□□□□□ -0.15
UPF3A-206ENST00000480362 SPIN2BQ9BPZ2 258 aa14.12□□□□□ -0.15
UPF3A-206ENST00000480362 AIFM2Q9BRQ8 373 aa14.12□□□□□ -0.15
UPF3A-206ENST00000480362 NMES1Q9C002 83 aa14.12□□□□□ -0.15
UPF3A-206ENST00000480362 YAE1D1Q9NRH1 226 aa14.12□□□□□ -0.15
UPF3A-206ENST00000480362 FAM90A9PA6NNJ1 464 aa14.11□□□□□ -0.15
UPF3A-206ENST00000480362 IGKV1D-33P01593 117 aa14.11□□□□□ -0.15
UPF3A-206ENST00000480362 IGKV1-33P01594 117 aa14.11□□□□□ -0.15
UPF3A-206ENST00000480362 SLC25A6P12236 298 aa14.11□□□□□ -0.15
UPF3A-206ENST00000480362 LGALS7P47929 136 aa14.11□□□□□ -0.15
UPF3A-206ENST00000480362 IL15RAQ13261 267 aa14.11□□□□□ -0.15
UPF3A-206ENST00000480362 HES1Q14469 280 aa14.11□□□□□ -0.15
UPF3A-206ENST00000480362 SMCO1Q147U7 214 aa14.11□□□□□ -0.15
UPF3A-206ENST00000480362 FAM120AOSQ5T036 256 aa14.11□□□□□ -0.15
UPF3A-206ENST00000480362 OR4A47Q6IF82 309 aa14.11□□□□□ -0.15
UPF3A-206ENST00000480362 TCTE3Q8IZS6 198 aa14.11□□□□□ -0.15
UPF3A-206ENST00000480362 BCL6BQ8N143 479 aaPredicted RBP14.11□□□□□ -0.15
UPF3A-206ENST00000480362 ASB13Q8WXK3 278 aa14.11□□□□□ -0.15
UPF3A-206ENST00000480362 RNF5Q99942 180 aa14.11□□□□□ -0.15
UPF3A-206ENST00000480362 TMEM140Q9NV12 185 aa14.11□□□□□ -0.15
UPF3A-206ENST00000480362 CACNG5Q9UF02 275 aa14.11□□□□□ -0.15
UPF3A-206ENST00000480362 CCDC168Q8NDH2 2452 aa14.1□□□□□ -0.15
UPF3A-206ENST00000480362 SMLR1H3BR10 107 aa14.1□□□□□ -0.15
UPF3A-206ENST00000480362 MOSP00540 346 aa14.1□□□□□ -0.15
UPF3A-206ENST00000480362 IGLV2-23P01705 113 aa14.1□□□□□ -0.15
UPF3A-206ENST00000480362 FBP1P09467 338 aa14.1□□□□□ -0.15
UPF3A-206ENST00000480362 OR9G9P0C7N8 305 aa14.1□□□□□ -0.15
UPF3A-206ENST00000480362 EBI3Q14213 229 aa14.1□□□□□ -0.15
UPF3A-206ENST00000480362 HNF4GQ14541 408 aa14.1□□□□□ -0.15
UPF3A-206ENST00000480362 SPNS3Q6ZMD2 512 aa14.1□□□□□ -0.15
UPF3A-206ENST00000480362 OR4D5Q8NGN0 318 aa14.1□□□□□ -0.15
UPF3A-206ENST00000480362 OR2T35Q8NGX2 323 aa14.1□□□□□ -0.15
UPF3A-206ENST00000480362 OR2T10Q8NGZ9 312 aa14.1□□□□□ -0.15
UPF3A-206ENST00000480362 OR1S1Q8NH92 325 aa14.1□□□□□ -0.15
UPF3A-206ENST00000480362 EAF1Q96JC9 268 aaPredicted RBP14.1□□□□□ -0.15
UPF3A-206ENST00000480362 SETXQ7Z333 2677 aaKnown RBP14.1□□□□□ -0.15
UPF3A-206ENST00000480362 CSMD1Q96PZ7 3565 aa14.1□□□□□ -0.15
UPF3A-206ENST00000480362 TRAV3A0A0B4J244 114 aa14.09□□□□□ -0.15
UPF3A-206ENST00000480362 PITX3O75364 302 aa14.09□□□□□ -0.15
UPF3A-206ENST00000480362 IL6RP08887 468 aaPredicted RBP14.09□□□□□ -0.15
UPF3A-206ENST00000480362 SAA1P0DJI8 122 aaPredicted RBP14.09□□□□□ -0.15
UPF3A-206ENST00000480362 CNTFRP26992 372 aa14.09□□□□□ -0.15
UPF3A-206ENST00000480362 FBLN7Q53RD9 439 aa14.09□□□□□ -0.15
UPF3A-206ENST00000480362 Q5BKY6 102 aa14.09□□□□□ -0.15
UPF3A-206ENST00000480362 THNSL2Q86YJ6 484 aa14.09□□□□□ -0.15
UPF3A-206ENST00000480362 PUSL1Q8N0Z8 303 aaKnown RBP14.09□□□□□ -0.15
UPF3A-206ENST00000480362 TEX29Q8N6K0 151 aa14.09□□□□□ -0.15
UPF3A-206ENST00000480362 TSNAXQ99598 290 aaKnown RBP14.09□□□□□ -0.15
UPF3A-206ENST00000480362 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.09□□□□□ -0.15
UPF3A-206ENST00000480362 NSG2Q9Y328 171 aa14.09□□□□□ -0.15
UPF3A-206ENST00000480362 ABCA1O95477 2261 aa14.09□□□□□ -0.15
UPF3A-206ENST00000480362 UPK2O00526 184 aa14.08□□□□□ -0.16
UPF3A-206ENST00000480362 FAM106CPP0CH98 169 aa14.08□□□□□ -0.16
UPF3A-206ENST00000480362 DYNLT3P51808 116 aa14.08□□□□□ -0.16
UPF3A-206ENST00000480362 UBE2KP61086 200 aa14.08□□□□□ -0.16
UPF3A-206ENST00000480362 RELBQ01201 579 aa14.08□□□□□ -0.16
UPF3A-206ENST00000480362 PSG5Q15238 335 aa14.08□□□□□ -0.16
UPF3A-206ENST00000480362 VMA21Q3ZAQ7 101 aa14.08□□□□□ -0.16
UPF3A-206ENST00000480362 LRRC37A5PQ49AS3 106 aa14.08□□□□□ -0.16
UPF3A-206ENST00000480362 IL17RELQ6ZVW7 336 aa14.08□□□□□ -0.16
UPF3A-206ENST00000480362 OR4A16Q8NH70 328 aa14.08□□□□□ -0.16
UPF3A-206ENST00000480362 PPP1R1CQ8WVI7 109 aa14.08□□□□□ -0.16
UPF3A-206ENST00000480362 C22orf15Q8WYQ4 148 aa14.08□□□□□ -0.16
UPF3A-206ENST00000480362 SSX3Q99909 188 aa14.08□□□□□ -0.16
UPF3A-206ENST00000480362 SMR3AQ99954 134 aa14.08□□□□□ -0.16
UPF3A-206ENST00000480362 COA4Q9NYJ1 87 aa14.08□□□□□ -0.16
UPF3A-206ENST00000480362 BET1LQ9NYM9 111 aa14.08□□□□□ -0.16
UPF3A-206ENST00000480362 ITPR3Q14573 2671 aa14.08□□□□□ -0.16
UPF3A-206ENST00000480362 CYSRT1A8MQ03 144 aa14.07□□□□□ -0.16
UPF3A-206ENST00000480362 SLC25A17O43808 307 aa14.07□□□□□ -0.16
UPF3A-206ENST00000480362 RBMXL2O75526 392 aaKnown RBP14.07□□□□□ -0.16
UPF3A-206ENST00000480362 SNAPC5O75971 98 aa14.07□□□□□ -0.16
UPF3A-206ENST00000480362 NXPH3O95157 252 aa14.07□□□□□ -0.16
UPF3A-206ENST00000480362 SCGB1D2O95969 90 aa14.07□□□□□ -0.16
UPF3A-206ENST00000480362 MBPP02686 304 aaPredicted RBP14.07□□□□□ -0.16
UPF3A-206ENST00000480362 CD99P14209 185 aa14.07□□□□□ -0.16
UPF3A-206ENST00000480362 TMEM11P17152 192 aa14.07□□□□□ -0.16
UPF3A-206ENST00000480362 PSMB6P28072 239 aa14.07□□□□□ -0.16
UPF3A-206ENST00000480362 F2RL1P55085 397 aa14.07□□□□□ -0.16
UPF3A-206ENST00000480362 RAB32Q13637 225 aa14.07□□□□□ -0.16
UPF3A-206ENST00000480362 DEFB112Q30KQ8 113 aa14.07□□□□□ -0.16
UPF3A-206ENST00000480362 CXorf66Q5JRM2 361 aaPredicted RBP14.07□□□□□ -0.16
UPF3A-206ENST00000480362 C9orf139Q6ZV77 190 aa14.07□□□□□ -0.16
UPF3A-206ENST00000480362 Q8N6K4 173 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms