RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 PLEKHA2Q9HB19 425 aa15.59■□□□□ 0.09
LIME1-205ENST00000480139 MCUBQ9NWR8 336 aa15.59■□□□□ 0.09
LIME1-205ENST00000480139 IGHV7-81A0A0B4J1V7 117 aa15.58■□□□□ 0.08
LIME1-205ENST00000480139 HPRT1P00492 218 aa15.58■□□□□ 0.08
LIME1-205ENST00000480139 HRASP01112 189 aa15.58■□□□□ 0.08
LIME1-205ENST00000480139 IGF1P05019 195 aa15.58■□□□□ 0.08
LIME1-205ENST00000480139 CTSDP07339 412 aaPredicted RBP15.58■□□□□ 0.08
LIME1-205ENST00000480139 VSIG10L2P0DP72 767 aa15.58■□□□□ 0.08
LIME1-205ENST00000480139 ZNF57Q68EA5 555 aaPredicted RBP15.58■□□□□ 0.08
LIME1-205ENST00000480139 TBC1D26Q86UD7 250 aa15.58■□□□□ 0.08
LIME1-205ENST00000480139 MARCH1Q8TCQ1 289 aa15.58■□□□□ 0.08
LIME1-205ENST00000480139 CHPT1Q8WUD6 406 aa15.58■□□□□ 0.08
LIME1-205ENST00000480139 CCDC32Q9BV29 185 aa15.58■□□□□ 0.08
LIME1-205ENST00000480139 OR51J1Q9H342 316 aa15.58■□□□□ 0.08
LIME1-205ENST00000480139 SAA1P0DJI8 122 aaPredicted RBP15.57■□□□□ 0.08
LIME1-205ENST00000480139 IL7P13232 177 aa15.57■□□□□ 0.08
LIME1-205ENST00000480139 INPP1P49441 399 aa15.57■□□□□ 0.08
LIME1-205ENST00000480139 PIGPP57054 158 aa15.57■□□□□ 0.08
LIME1-205ENST00000480139 TAS2R31P59538 309 aa15.57■□□□□ 0.08
LIME1-205ENST00000480139 KRTAP10-3P60369 221 aa15.57■□□□□ 0.08
LIME1-205ENST00000480139 POU2AF1Q16633 256 aa15.57■□□□□ 0.08
LIME1-205ENST00000480139 ZNF562Q6V9R5 426 aa15.57■□□□□ 0.08
LIME1-205ENST00000480139 CCDC71LQ8N9Z2 235 aa15.57■□□□□ 0.08
LIME1-205ENST00000480139 VSTM2AQ8TAG5 236 aa15.57■□□□□ 0.08
LIME1-205ENST00000480139 SCGB3A2Q96PL1 93 aa15.57■□□□□ 0.08
LIME1-205ENST00000480139 GON7Q9BXV9 100 aa15.57■□□□□ 0.08
LIME1-205ENST00000480139 TPSG1Q9NRR2 321 aa15.57■□□□□ 0.08
LIME1-205ENST00000480139 COMMD9Q9P000 198 aa15.57■□□□□ 0.08
LIME1-205ENST00000480139 GPR132Q9UNW8 380 aa15.57■□□□□ 0.08
LIME1-205ENST00000480139 LINC01548A6NM66 108 aa15.56■□□□□ 0.08
LIME1-205ENST00000480139 FCN1O00602 326 aa15.56■□□□□ 0.08
LIME1-205ENST00000480139 MPPED1O15442 326 aa15.56■□□□□ 0.08
LIME1-205ENST00000480139 CREBL2O60519 120 aaPredicted RBP15.56■□□□□ 0.08
LIME1-205ENST00000480139 CD40LGP29965 261 aa15.56■□□□□ 0.08
LIME1-205ENST00000480139 CRIP2P52943 208 aaPredicted RBP15.56■□□□□ 0.08
LIME1-205ENST00000480139 CX3CL1P78423 397 aa15.56■□□□□ 0.08
LIME1-205ENST00000480139 STPG2Q8N412 459 aa15.56■□□□□ 0.08
LIME1-205ENST00000480139 C7orf50Q9BRJ6 194 aaKnown RBP15.56■□□□□ 0.08
LIME1-205ENST00000480139 C14orf166Q9Y224 244 aaKnown RBP15.56■□□□□ 0.08
LIME1-205ENST00000480139 ANK2Q01484 3957 aa15.55■□□□□ 0.08
LIME1-205ENST00000480139 NAP1L6A6NFF2 107 aa15.55■□□□□ 0.08
LIME1-205ENST00000480139 B3GALNT1O75752 331 aa15.55■□□□□ 0.08
LIME1-205ENST00000480139 CA2P00918 260 aa15.55■□□□□ 0.08
LIME1-205ENST00000480139 NQO2P16083 231 aa15.55■□□□□ 0.08
LIME1-205ENST00000480139 PI3P19957 117 aa15.55■□□□□ 0.08
LIME1-205ENST00000480139 CENPVQ7Z7K6 275 aaPredicted RBP15.55■□□□□ 0.08
LIME1-205ENST00000480139 PUSL1Q8N0Z8 303 aaKnown RBP15.55■□□□□ 0.08
LIME1-205ENST00000480139 CADM3Q8N126 398 aa15.55■□□□□ 0.08
LIME1-205ENST00000480139 RHOVQ96L33 236 aa15.55■□□□□ 0.08
LIME1-205ENST00000480139 NOL4LQ96MY1 436 aaPredicted RBP15.55■□□□□ 0.08
LIME1-205ENST00000480139 RTBDNQ9BSG5 229 aaPredicted RBP15.55■□□□□ 0.08
LIME1-205ENST00000480139 WDR12Q9GZL7 423 aaKnown RBP15.55■□□□□ 0.08
LIME1-205ENST00000480139 C5orf66Q9H5L9 145 aa15.55■□□□□ 0.08
LIME1-205ENST00000480139 COPZ2Q9P299 210 aa15.55■□□□□ 0.08
LIME1-205ENST00000480139 H0Y980 276 aa15.54■□□□□ 0.08
LIME1-205ENST00000480139 ATP6V0E1O15342 81 aa15.54■□□□□ 0.08
LIME1-205ENST00000480139 OR2A4O95047 310 aa15.54■□□□□ 0.08
LIME1-205ENST00000480139 S1PR2O95136 353 aa15.54■□□□□ 0.08
LIME1-205ENST00000480139 NDPQ00604 133 aa15.54■□□□□ 0.08
LIME1-205ENST00000480139 PRSS8Q16651 343 aa15.54■□□□□ 0.08
LIME1-205ENST00000480139 MRGPRG-AS1Q2M3A8 158 aa15.54■□□□□ 0.08
LIME1-205ENST00000480139 ZNF585BQ52M93 769 aa15.54■□□□□ 0.08
LIME1-205ENST00000480139 OR2A7Q96R45 310 aa15.54■□□□□ 0.08
LIME1-205ENST00000480139 SLC25A21Q9BQT8 299 aaPredicted RBP15.54■□□□□ 0.08
LIME1-205ENST00000480139 PSMB11A5LHX3 300 aa15.53■□□□□ 0.08
LIME1-205ENST00000480139 KBTBD11O94819 623 aa15.53■□□□□ 0.08
LIME1-205ENST00000480139 FGF2P09038 288 aa15.53■□□□□ 0.08
LIME1-205ENST00000480139 SLC35B1P78383 322 aa15.53■□□□□ 0.08
LIME1-205ENST00000480139 SSBP2P81877 361 aaPredicted RBP15.53■□□□□ 0.08
LIME1-205ENST00000480139 CFHR3Q02985 330 aa15.53■□□□□ 0.08
LIME1-205ENST00000480139 ZNF846Q147U1 533 aa15.53■□□□□ 0.08
LIME1-205ENST00000480139 MMD2Q8IY49 270 aa15.53■□□□□ 0.08
LIME1-205ENST00000480139 VKORC1L1Q8N0U8 176 aa15.53■□□□□ 0.08
LIME1-205ENST00000480139 COMMD1Q8N668 190 aa15.53■□□□□ 0.08
LIME1-205ENST00000480139 OR5AU1Q8NGC0 362 aa15.53■□□□□ 0.08
LIME1-205ENST00000480139 OR4A5Q8NH83 315 aa15.53■□□□□ 0.08
LIME1-205ENST00000480139 TMEM167AQ8TBQ9 72 aa15.53■□□□□ 0.08
LIME1-205ENST00000480139 CLCC1Q96S66 551 aa15.53■□□□□ 0.08
LIME1-205ENST00000480139 PARP11Q9NR21 331 aa15.53■□□□□ 0.08
LIME1-205ENST00000480139 BET1LQ9NYM9 111 aa15.53■□□□□ 0.08
LIME1-205ENST00000480139 PLXNB1O43157 2135 aa15.52■□□□□ 0.08
LIME1-205ENST00000480139 C3orf85A0A1B0GTC6 90 aa15.52■□□□□ 0.08
LIME1-205ENST00000480139 CENPXA8MT69 81 aa15.52■□□□□ 0.08
LIME1-205ENST00000480139 FBXO24O75426 580 aa15.52■□□□□ 0.08
LIME1-205ENST00000480139 RPA2P15927 270 aa15.52■□□□□ 0.08
LIME1-205ENST00000480139 VDAC1P21796 283 aa15.52■□□□□ 0.08
LIME1-205ENST00000480139 LPAR6P43657 344 aa15.52■□□□□ 0.08
LIME1-205ENST00000480139 SRSF4Q08170 494 aaKnown RBP15.52■□□□□ 0.08
LIME1-205ENST00000480139 PJVKQ0ZLH3 352 aa15.52■□□□□ 0.08
LIME1-205ENST00000480139 OR4A47Q6IF82 309 aa15.52■□□□□ 0.08
LIME1-205ENST00000480139 SGMS2Q8NHU3 365 aa15.52■□□□□ 0.08
LIME1-205ENST00000480139 ARPC1AQ92747 370 aa15.52■□□□□ 0.08
LIME1-205ENST00000480139 R3HDM4Q96D70 268 aa15.52■□□□□ 0.08
LIME1-205ENST00000480139 ZNF430Q9H8G1 570 aaPredicted RBP15.52■□□□□ 0.08
LIME1-205ENST00000480139 LINC00527Q9UJ94 153 aa15.52■□□□□ 0.08
LIME1-205ENST00000480139 VSIG4Q9Y279 399 aa15.52■□□□□ 0.08
LIME1-205ENST00000480139 FBXO7Q9Y3I1 522 aa15.52■□□□□ 0.08
LIME1-205ENST00000480139 DNHD1Q96M86 4753 aa15.51■□□□□ 0.07
LIME1-205ENST00000480139 MARCH11A6NNE9 402 aa15.51■□□□□ 0.07
LIME1-205ENST00000480139 ARPC1BO15143 372 aaKnown RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms