RNA–Protein interactions for RNA: ENST00000480067.1

CLDN11-205, Transcript of claudin 11, humanhuman

TSL 1 (best)

Gene CLDN11, Length 1,589 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-205ENST00000480067 SRSF2Q01130 221 aaKnown RBP8.92□□□□□ -0.98
CLDN11-205ENST00000480067 PSG5Q15238 335 aa8.92□□□□□ -0.98
CLDN11-205ENST00000480067 VMA21Q3ZAQ7 101 aa8.92□□□□□ -0.98
CLDN11-205ENST00000480067 C4orf46Q504U0 113 aa8.92□□□□□ -0.98
CLDN11-205ENST00000480067 ZNF585BQ52M93 769 aa8.92□□□□□ -0.98
CLDN11-205ENST00000480067 PLET1Q6UQ28 207 aa8.92□□□□□ -0.98
CLDN11-205ENST00000480067 VKORC1L1Q8N0U8 176 aa8.92□□□□□ -0.98
CLDN11-205ENST00000480067 NPBQ8NG41 125 aa8.92□□□□□ -0.98
CLDN11-205ENST00000480067 TMEM230Q96A57 120 aa8.92□□□□□ -0.98
CLDN11-205ENST00000480067 RHOVQ96L33 236 aa8.92□□□□□ -0.98
CLDN11-205ENST00000480067 METTL1Q9UBP6 276 aaKnown RBP8.92□□□□□ -0.98
CLDN11-205ENST00000480067 RRHO14718 337 aa8.91□□□□□ -0.98
CLDN11-205ENST00000480067 SLC25A17O43808 307 aa8.91□□□□□ -0.98
CLDN11-205ENST00000480067 S1PR2O95136 353 aa8.91□□□□□ -0.98
CLDN11-205ENST00000480067 SPDEFO95238 335 aa8.91□□□□□ -0.98
CLDN11-205ENST00000480067 PTTG1O95997 202 aa8.91□□□□□ -0.98
CLDN11-205ENST00000480067 KRASP01116 189 aa8.91□□□□□ -0.98
CLDN11-205ENST00000480067 VSIG10L2P0DP72 767 aa8.91□□□□□ -0.98
CLDN11-205ENST00000480067 RPA2P15927 270 aa8.91□□□□□ -0.98
CLDN11-205ENST00000480067 UBE2KP61086 200 aa8.91□□□□□ -0.98
CLDN11-205ENST00000480067 ERVK-16P61578 105 aa8.91□□□□□ -0.98
CLDN11-205ENST00000480067 BLCAPP62952 87 aa8.91□□□□□ -0.98
CLDN11-205ENST00000480067 DHODHQ02127 395 aa8.91□□□□□ -0.98
CLDN11-205ENST00000480067 LIN54Q6MZP7 749 aa8.91□□□□□ -0.98
CLDN11-205ENST00000480067 C5orf56Q8N8D9 126 aa8.91□□□□□ -0.98
CLDN11-205ENST00000480067 Q8N9W7 124 aa8.91□□□□□ -0.98
CLDN11-205ENST00000480067 DMBX1Q8NFW5 382 aa8.91□□□□□ -0.98
CLDN11-205ENST00000480067 GLYATL2Q8WU03 294 aa8.91□□□□□ -0.98
CLDN11-205ENST00000480067 ZFAND2BQ8WV99 257 aa8.91□□□□□ -0.98
CLDN11-205ENST00000480067 GALNT14Q96FL9 552 aa8.91□□□□□ -0.98
CLDN11-205ENST00000480067 TMEM222Q9H0R3 208 aa8.91□□□□□ -0.98
CLDN11-205ENST00000480067 ATG12O94817 140 aa8.9□□□□□ -0.98
CLDN11-205ENST00000480067 NDUFA3O95167 84 aa8.9□□□□□ -0.98
CLDN11-205ENST00000480067 CDS2O95674 445 aa8.9□□□□□ -0.98
CLDN11-205ENST00000480067 IGLV2-23P01705 113 aa8.9□□□□□ -0.98
CLDN11-205ENST00000480067 OR4E1P0C645 316 aa8.9□□□□□ -0.98
CLDN11-205ENST00000480067 UCP1P25874 307 aa8.9□□□□□ -0.98
CLDN11-205ENST00000480067 RAB25P57735 213 aa8.9□□□□□ -0.98
CLDN11-205ENST00000480067 SUPT4H1P63272 117 aaKnown RBP8.9□□□□□ -0.98
CLDN11-205ENST00000480067 PPP1R1AQ13522 171 aa8.9□□□□□ -0.98
CLDN11-205ENST00000480067 C5orf64Q2M2E5 130 aa8.9□□□□□ -0.98
CLDN11-205ENST00000480067 RGS21Q2M5E4 152 aa8.9□□□□□ -0.98
CLDN11-205ENST00000480067 SSX9Q7RTT3 188 aa8.9□□□□□ -0.98
CLDN11-205ENST00000480067 PRIMA1Q86XR5 153 aa8.9□□□□□ -0.98
CLDN11-205ENST00000480067 ZNF695Q8IW36 515 aa8.9□□□□□ -0.98
CLDN11-205ENST00000480067 FAM71E2Q8N5Q1 922 aa8.9□□□□□ -0.98
CLDN11-205ENST00000480067 TEX45Q8NA69 505 aa8.9□□□□□ -0.98
CLDN11-205ENST00000480067 VSTM2AQ8TAG5 236 aa8.9□□□□□ -0.98
CLDN11-205ENST00000480067 R3HDM4Q96D70 268 aa8.9□□□□□ -0.98
CLDN11-205ENST00000480067 PRSS22Q9GZN4 317 aa8.9□□□□□ -0.98
CLDN11-205ENST00000480067 ALX4Q9H161 411 aaPredicted RBP8.9□□□□□ -0.98
CLDN11-205ENST00000480067 FBXL15Q9H469 300 aa8.9□□□□□ -0.98
CLDN11-205ENST00000480067 BEX1Q9HBH7 125 aa8.9□□□□□ -0.98
CLDN11-205ENST00000480067 COMMD9Q9P000 198 aa8.9□□□□□ -0.98
CLDN11-205ENST00000480067 MARCH11A6NNE9 402 aa8.9□□□□□ -0.99
CLDN11-205ENST00000480067 OR2A4O95047 310 aa8.9□□□□□ -0.99
CLDN11-205ENST00000480067 SFT2D2O95562 160 aa8.9□□□□□ -0.99
CLDN11-205ENST00000480067 HLA-AP01891 365 aaKnown RBP8.9□□□□□ -0.99
CLDN11-205ENST00000480067 AMY1AP04745 511 aa8.9□□□□□ -0.99
CLDN11-205ENST00000480067 SAA1P0DJI8 122 aaPredicted RBP8.9□□□□□ -0.99
CLDN11-205ENST00000480067 G6PCP35575 357 aa8.9□□□□□ -0.99
CLDN11-205ENST00000480067 SRPXP78539 464 aa8.9□□□□□ -0.99
CLDN11-205ENST00000480067 C9orf152Q5JTZ5 239 aa8.9□□□□□ -0.99
CLDN11-205ENST00000480067 PPP1R27Q86WC6 154 aa8.9□□□□□ -0.99
CLDN11-205ENST00000480067 CASTOR1Q8WTX7 329 aa8.9□□□□□ -0.99
CLDN11-205ENST00000480067 OR2A7Q96R45 310 aa8.9□□□□□ -0.99
CLDN11-205ENST00000480067 CLCC1Q96S66 551 aa8.9□□□□□ -0.99
CLDN11-205ENST00000480067 SIGLEC9Q9Y336 463 aa8.9□□□□□ -0.99
CLDN11-205ENST00000480067 PIGBOS1A0A0B4J2F0 54 aa8.89□□□□□ -0.99
CLDN11-205ENST00000480067 C9orf170A2RU37 121 aa8.89□□□□□ -0.99
CLDN11-205ENST00000480067 SH2D7A6NKC9 451 aaPredicted RBP8.89□□□□□ -0.99
CLDN11-205ENST00000480067 INMT-MINDY4F8WBC2 141 aa8.89□□□□□ -0.99
CLDN11-205ENST00000480067 ACTL6BO94805 426 aa8.89□□□□□ -0.99
CLDN11-205ENST00000480067 DHRS2Q13268 280 aa8.89□□□□□ -0.99
CLDN11-205ENST00000480067 TMEM187Q14656 261 aa8.89□□□□□ -0.99
CLDN11-205ENST00000480067 ARSJQ5FYB0 599 aaPredicted RBP8.89□□□□□ -0.99
CLDN11-205ENST00000480067 TMEM268Q5VZI3 342 aa8.89□□□□□ -0.99
CLDN11-205ENST00000480067 OR4A47Q6IF82 309 aa8.89□□□□□ -0.99
CLDN11-205ENST00000480067 H2BFWTQ7Z2G1 175 aa8.89□□□□□ -0.99
CLDN11-205ENST00000480067 LGI3Q8N145 548 aa8.89□□□□□ -0.99
CLDN11-205ENST00000480067 RNASE11Q8TAA1 199 aaKnown RBP8.89□□□□□ -0.99
CLDN11-205ENST00000480067 RBPMSQ93062 196 aaKnown RBP8.89□□□□□ -0.99
CLDN11-205ENST00000480067 RRNAD1Q96FB5 475 aaKnown RBP8.89□□□□□ -0.99
CLDN11-205ENST00000480067 TMEM56Q96MV1 263 aa8.89□□□□□ -0.99
CLDN11-205ENST00000480067 MARVELD1Q9BSK0 173 aa8.89□□□□□ -0.99
CLDN11-205ENST00000480067 RANBP3Q9H6Z4 567 aaPredicted RBP8.89□□□□□ -0.99
CLDN11-205ENST00000480067 TMEM140Q9NV12 185 aa8.89□□□□□ -0.99
CLDN11-205ENST00000480067 TMEM56-RWDD3S4R434 201 aa8.89□□□□□ -0.99
CLDN11-205ENST00000480067 C2CD3Q4AC94 2353 aa8.89□□□□□ -0.99
CLDN11-205ENST00000480067 FBN1P35555 2871 aaKnown RBP8.89□□□□□ -0.99
CLDN11-205ENST00000480067 FCN1O00602 326 aa8.88□□□□□ -0.99
CLDN11-205ENST00000480067 CREBL2O60519 120 aaPredicted RBP8.88□□□□□ -0.99
CLDN11-205ENST00000480067 CNIH1O95406 144 aa8.88□□□□□ -0.99
CLDN11-205ENST00000480067 DUS4LO95620 317 aaKnown RBP8.88□□□□□ -0.99
CLDN11-205ENST00000480067 DHFRP00374 187 aa8.88□□□□□ -0.99
CLDN11-205ENST00000480067 IGKV1-39P01597 117 aa8.88□□□□□ -0.99
CLDN11-205ENST00000480067 IGKV1D-39P04432 117 aa8.88□□□□□ -0.99
CLDN11-205ENST00000480067 CRYGBP07316 175 aa8.88□□□□□ -0.99
CLDN11-205ENST00000480067 SPNP16150 400 aa8.88□□□□□ -0.99
CLDN11-205ENST00000480067 MECP2P51608 486 aaKnown RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms