RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 KIAA1644Q3SXP7 199 aa17.31■□□□□ 0.36
COL13A1-208ENST00000479733 SSMEM1Q8WWF3 244 aa17.31■□□□□ 0.36
COL13A1-208ENST00000479733 SNURFLB1AK76 121 aa17.31■□□□□ 0.36
COL13A1-208ENST00000479733 SIAH2O43255 324 aa17.31■□□□□ 0.36
COL13A1-208ENST00000479733 P0C879 139 aa17.31■□□□□ 0.36
COL13A1-208ENST00000479733 CATR1Q13166 79 aa17.31■□□□□ 0.36
COL13A1-208ENST00000479733 IFI44Q8TCB0 444 aa17.31■□□□□ 0.36
COL13A1-208ENST00000479733 FAM234AQ9H0X4 552 aa17.31■□□□□ 0.36
COL13A1-208ENST00000479733 FAM166BA8MTA8 275 aa17.3■□□□□ 0.36
COL13A1-208ENST00000479733 PDLIM3Q53GG5 364 aaPredicted RBP17.3■□□□□ 0.36
COL13A1-208ENST00000479733 MRGPRDQ8TDS7 321 aa17.3■□□□□ 0.36
COL13A1-208ENST00000479733 CIB3Q96Q77 187 aaPredicted RBP17.3■□□□□ 0.36
COL13A1-208ENST00000479733 PKIBQ9C010 78 aa17.3■□□□□ 0.36
COL13A1-208ENST00000479733 TNRC6AQ8NDV7 1962 aaKnown RBP17.3■□□□□ 0.36
COL13A1-208ENST00000479733 LINC00473A8K010 186 aa17.3■□□□□ 0.36
COL13A1-208ENST00000479733 SH2D1BO14796 132 aa17.3■□□□□ 0.36
COL13A1-208ENST00000479733 SS18L1O75177 396 aaPredicted RBP17.3■□□□□ 0.36
COL13A1-208ENST00000479733 IGHEP01854 428 aa17.3■□□□□ 0.36
COL13A1-208ENST00000479733 GAGE1Q13065 139 aa17.3■□□□□ 0.36
COL13A1-208ENST00000479733 IL11RAQ14626 422 aa17.3■□□□□ 0.36
COL13A1-208ENST00000479733 ALKBH6Q3KRA9 238 aa17.3■□□□□ 0.36
COL13A1-208ENST00000479733 C11orf42Q8N5U0 333 aa17.3■□□□□ 0.36
COL13A1-208ENST00000479733 NINJ1Q92982 152 aa17.3■□□□□ 0.36
COL13A1-208ENST00000479733 TMEM45BQ96B21 275 aa17.3■□□□□ 0.36
COL13A1-208ENST00000479733 APH1AQ96BI3 265 aa17.3■□□□□ 0.36
COL13A1-208ENST00000479733 MBNL3Q9NUK0 354 aaKnown RBP17.3■□□□□ 0.36
COL13A1-208ENST00000479733 FBXL7Q9UJT9 491 aa17.3■□□□□ 0.36
COL13A1-208ENST00000479733 YTHDF2Q9Y5A9 579 aaKnown RBP17.3■□□□□ 0.36
COL13A1-208ENST00000479733 K7EN84 100 aa17.29■□□□□ 0.36
COL13A1-208ENST00000479733 PSG7Q13046 419 aa17.29■□□□□ 0.36
COL13A1-208ENST00000479733 TRA2AQ13595 282 aaKnown RBP eCLIP17.29■□□□□ 0.36
COL13A1-208ENST00000479733 NRN1LQ496H8 165 aa17.29■□□□□ 0.36
COL13A1-208ENST00000479733 SIGLECL1Q8N7X8 197 aa17.29■□□□□ 0.36
COL13A1-208ENST00000479733 HES7Q9BYE0 225 aa17.29■□□□□ 0.36
COL13A1-208ENST00000479733 WDR83OSQ9Y284 106 aa17.29■□□□□ 0.36
COL13A1-208ENST00000479733 CYB561P49447 251 aa17.29■□□□□ 0.36
COL13A1-208ENST00000479733 RANP62826 216 aaKnown RBP17.29■□□□□ 0.36
COL13A1-208ENST00000479733 LRFN3Q9BTN0 628 aa17.29■□□□□ 0.36
COL13A1-208ENST00000479733 WNT9BO14905 357 aa17.28■□□□□ 0.36
COL13A1-208ENST00000479733 CLDN14O95500 239 aa17.28■□□□□ 0.36
COL13A1-208ENST00000479733 HBZP02008 142 aa17.28■□□□□ 0.36
COL13A1-208ENST00000479733 SELENOTP62341 195 aa17.28■□□□□ 0.36
COL13A1-208ENST00000479733 RPL31P62899 125 aaKnown RBP17.28■□□□□ 0.36
COL13A1-208ENST00000479733 VWC2Q2TAL6 325 aa17.28■□□□□ 0.36
COL13A1-208ENST00000479733 VKORC1L1Q8N0U8 176 aa17.28■□□□□ 0.36
COL13A1-208ENST00000479733 TRAV34A0A0B4J273 112 aa17.28■□□□□ 0.36
COL13A1-208ENST00000479733 IL6RP08887 468 aaPredicted RBP17.28■□□□□ 0.36
COL13A1-208ENST00000479733 ARR3P36575 388 aa17.28■□□□□ 0.36
COL13A1-208ENST00000479733 RAB7AP51149 207 aa17.28■□□□□ 0.36
COL13A1-208ENST00000479733 SAP25Q8TEE9 199 aa17.28■□□□□ 0.36
COL13A1-208ENST00000479733 RTL8AQ9BWD3 113 aa17.28■□□□□ 0.36
COL13A1-208ENST00000479733 WDFY4Q6ZS81 3184 aa17.28■□□□□ 0.36
COL13A1-208ENST00000479733 GABRA2P47869 451 aa17.27■□□□□ 0.36
COL13A1-208ENST00000479733 COMPP49747 757 aaPredicted RBP17.27■□□□□ 0.36
COL13A1-208ENST00000479733 DNAJC4Q9NNZ3 241 aa17.27■□□□□ 0.36
COL13A1-208ENST00000479733 WIPI2Q9Y4P8 454 aa17.27■□□□□ 0.36
COL13A1-208ENST00000479733 IGHV3-13P01766 116 aa17.27■□□□□ 0.36
COL13A1-208ENST00000479733 IGHV3-7P01780 117 aa17.27■□□□□ 0.36
COL13A1-208ENST00000479733 OR9G9P0C7N8 305 aa17.27■□□□□ 0.36
COL13A1-208ENST00000479733 PMCHP20382 165 aa17.27■□□□□ 0.36
COL13A1-208ENST00000479733 SPATA31B1PQ5VZV4 182 aa17.27■□□□□ 0.36
COL13A1-208ENST00000479733 ZNF826PQ6ZT77 177 aa17.27■□□□□ 0.36
COL13A1-208ENST00000479733 OR8I2Q8N0Y5 310 aa17.27■□□□□ 0.36
COL13A1-208ENST00000479733 IL36BQ9NZH7 164 aa17.27■□□□□ 0.36
COL13A1-208ENST00000479733 PSG11Q9UQ72 335 aa17.27■□□□□ 0.36
COL13A1-208ENST00000479733 DIRC3C9JPN6 131 aa17.27■□□□□ 0.35
COL13A1-208ENST00000479733 SSTR5P35346 364 aa17.27■□□□□ 0.35
COL13A1-208ENST00000479733 RAB29O14966 203 aa17.26■□□□□ 0.35
COL13A1-208ENST00000479733 TNRC18O15417 2968 aaPredicted RBP17.26■□□□□ 0.35
COL13A1-208ENST00000479733 HAND1O96004 215 aa17.26■□□□□ 0.35
COL13A1-208ENST00000479733 LINC00614P0C842 121 aa17.26■□□□□ 0.35
COL13A1-208ENST00000479733 CHRNB4P30926 498 aa17.26■□□□□ 0.35
COL13A1-208ENST00000479733 COL5A1-AS1Q5SY13 56 aa17.26■□□□□ 0.35
COL13A1-208ENST00000479733 LINC00470Q9BZP3 86 aa17.26■□□□□ 0.35
COL13A1-208ENST00000479733 GNB4Q9HAV0 340 aa17.26■□□□□ 0.35
COL13A1-208ENST00000479733 HEYLQ9NQ87 328 aaPredicted RBP17.26■□□□□ 0.35
COL13A1-208ENST00000479733 FOXJ2Q9P0K8 574 aa17.26■□□□□ 0.35
COL13A1-208ENST00000479733 FOXH1O75593 365 aa17.26■□□□□ 0.35
COL13A1-208ENST00000479733 CYC1P08574 325 aa17.26■□□□□ 0.35
COL13A1-208ENST00000479733 TREML4Q6UXN2 200 aa17.26■□□□□ 0.35
COL13A1-208ENST00000479733 ABHD12Q8N2K0 398 aa17.26■□□□□ 0.35
COL13A1-208ENST00000479733 MS4A5Q9H3V2 200 aa17.26■□□□□ 0.35
COL13A1-208ENST00000479733 IGKV3D-15A0A087WSY6 115 aa17.25■□□□□ 0.35
COL13A1-208ENST00000479733 TCL1AP56279 114 aa17.25■□□□□ 0.35
COL13A1-208ENST00000479733 HTD2P86397 168 aa17.25■□□□□ 0.35
COL13A1-208ENST00000479733 OR2M7Q8NG81 312 aa17.25■□□□□ 0.35
COL13A1-208ENST00000479733 TBL2Q9Y4P3 447 aaKnown RBP17.25■□□□□ 0.35
COL13A1-208ENST00000479733 AMTP48728 403 aa17.25■□□□□ 0.35
COL13A1-208ENST00000479733 SPATA45Q537H7 98 aa17.25■□□□□ 0.35
COL13A1-208ENST00000479733 MDP1Q86V88 176 aa17.25■□□□□ 0.35
COL13A1-208ENST00000479733 MMD2Q8IY49 270 aa17.25■□□□□ 0.35
COL13A1-208ENST00000479733 ST6GALNAC3Q8NDV1 305 aa17.25■□□□□ 0.35
COL13A1-208ENST00000479733 MGST2Q99735 147 aa17.25■□□□□ 0.35
COL13A1-208ENST00000479733 SEPSECSQ9HD40 501 aaKnown RBP17.25■□□□□ 0.35
COL13A1-208ENST00000479733 TUBG2Q9NRH3 451 aa17.25■□□□□ 0.35
COL13A1-208ENST00000479733 NAT8BQ9UHF3 227 aa17.25■□□□□ 0.35
COL13A1-208ENST00000479733 TMEM30CPA0ZSE6 113 aa17.24■□□□□ 0.35
COL13A1-208ENST00000479733 CELA3BP08861 270 aa17.24■□□□□ 0.35
COL13A1-208ENST00000479733 TRIP6Q15654 476 aaKnown RBP17.24■□□□□ 0.35
COL13A1-208ENST00000479733 PPP1R32Q7Z5V6 425 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms