RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 EGR2P11161 476 aaPredicted RBP12.12□□□□□ -0.47
C9orf3-217ENST00000479161 PTBP1P26599 531 aaKnown RBP eCLIP12.12□□□□□ -0.471e-7■■■□□ 14.7
C9orf3-217ENST00000479161 TNFSF8P32971 234 aa12.12□□□□□ -0.47
C9orf3-217ENST00000479161 TAS2R19P59542 299 aa12.12□□□□□ -0.47
C9orf3-217ENST00000479161 TSPAN5P62079 268 aa12.12□□□□□ -0.47
C9orf3-217ENST00000479161 POU2AF1Q16633 256 aa12.12□□□□□ -0.47
C9orf3-217ENST00000479161 ZNF818PQ6ZRF7 136 aa12.12□□□□□ -0.47
C9orf3-217ENST00000479161 WFDC9Q8NEX5 89 aa12.12□□□□□ -0.47
C9orf3-217ENST00000479161 OR5M8Q8NGP6 311 aa12.12□□□□□ -0.47
C9orf3-217ENST00000479161 TCTEX1D2Q8WW35 142 aa12.12□□□□□ -0.47
C9orf3-217ENST00000479161 C6orf62Q9GZU0 229 aaPredicted RBP12.12□□□□□ -0.47
C9orf3-217ENST00000479161 LINC00527Q9UJ94 153 aa12.12□□□□□ -0.47
C9orf3-217ENST00000479161 CCDC160A6NGH7 325 aa12.11□□□□□ -0.47
C9orf3-217ENST00000479161 CA2P00918 260 aa12.11□□□□□ -0.47
C9orf3-217ENST00000479161 FCER2P06734 321 aa12.11□□□□□ -0.47
C9orf3-217ENST00000479161 FXYD4P59646 89 aa12.11□□□□□ -0.47
C9orf3-217ENST00000479161 NDPQ00604 133 aa12.11□□□□□ -0.47
C9orf3-217ENST00000479161 MRGPRG-AS1Q2M3A8 158 aa12.11□□□□□ -0.47
C9orf3-217ENST00000479161 NSUN5P1Q3KNT7 163 aa12.11□□□□□ -0.47
C9orf3-217ENST00000479161 RNASE10Q5GAN6 216 aaKnown RBP12.11□□□□□ -0.47
C9orf3-217ENST00000479161 LHFPL1Q86WI0 220 aa12.11□□□□□ -0.47
C9orf3-217ENST00000479161 R3HDM4Q96D70 268 aa12.11□□□□□ -0.47
C9orf3-217ENST00000479161 RSRP1Q9BUV0 290 aa12.11□□□□□ -0.47
C9orf3-217ENST00000479161 PLEKHA2Q9HB19 425 aa12.11□□□□□ -0.47
C9orf3-217ENST00000479161 PARP11Q9NR21 331 aa12.11□□□□□ -0.47
C9orf3-217ENST00000479161 H3BUA1 57 aa12.1□□□□□ -0.47
C9orf3-217ENST00000479161 GPR31O00270 319 aa12.1□□□□□ -0.47
C9orf3-217ENST00000479161 HPRT1P00492 218 aa12.1□□□□□ -0.47
C9orf3-217ENST00000479161 IFNA6P05013 189 aa12.1□□□□□ -0.47
C9orf3-217ENST00000479161 S100GP29377 79 aa12.1□□□□□ -0.47
C9orf3-217ENST00000479161 MAS1LP35410 378 aa12.1□□□□□ -0.47
C9orf3-217ENST00000479161 TAS2R31P59538 309 aa12.1□□□□□ -0.47
C9orf3-217ENST00000479161 SSBP2P81877 361 aaPredicted RBP12.1□□□□□ -0.47
C9orf3-217ENST00000479161 FXYD3Q14802 87 aa12.1□□□□□ -0.47
C9orf3-217ENST00000479161 PRSS8Q16651 343 aa12.1□□□□□ -0.47
C9orf3-217ENST00000479161 AADACL3Q5VUY0 350 aa12.1□□□□□ -0.47
C9orf3-217ENST00000479161 MMD2Q8IY49 270 aa12.1□□□□□ -0.47
C9orf3-217ENST00000479161 SLC38A6Q8IZM9 456 aa12.1□□□□□ -0.47
C9orf3-217ENST00000479161 PUSL1Q8N0Z8 303 aaKnown RBP12.1□□□□□ -0.47
C9orf3-217ENST00000479161 POC5Q8NA72 575 aa12.1□□□□□ -0.47
C9orf3-217ENST00000479161 OR4A5Q8NH83 315 aa12.1□□□□□ -0.47
C9orf3-217ENST00000479161 ARPC1AQ92747 370 aa12.1□□□□□ -0.47
C9orf3-217ENST00000479161 ZNF486Q96H40 463 aaPredicted RBP12.1□□□□□ -0.47
C9orf3-217ENST00000479161 UBE2E2Q96LR5 201 aa12.1□□□□□ -0.47
C9orf3-217ENST00000479161 FOXA2Q9Y261 457 aaPredicted RBP12.1□□□□□ -0.47
C9orf3-217ENST00000479161 FBXO7Q9Y3I1 522 aa12.1□□□□□ -0.47
C9orf3-217ENST00000479161 FABP12A6NFH5 140 aa12.09□□□□□ -0.47
C9orf3-217ENST00000479161 G3V318 75 aa12.09□□□□□ -0.47
C9orf3-217ENST00000479161 PGLYRP1O75594 196 aaPredicted RBP12.09□□□□□ -0.47
C9orf3-217ENST00000479161 OR2A4O95047 310 aa12.09□□□□□ -0.47
C9orf3-217ENST00000479161 CD3DP04234 171 aa12.09□□□□□ -0.47
C9orf3-217ENST00000479161 SAA1P0DJI8 122 aaPredicted RBP12.09□□□□□ -0.47
C9orf3-217ENST00000479161 F2RP25116 425 aa12.09□□□□□ -0.47
C9orf3-217ENST00000479161 S100A5P33763 92 aa12.09□□□□□ -0.47
C9orf3-217ENST00000479161 ETV6P41212 452 aa12.09□□□□□ -0.47
C9orf3-217ENST00000479161 ECI1P42126 302 aa12.09□□□□□ -0.47
C9orf3-217ENST00000479161 DGCR2P98153 550 aa12.09□□□□□ -0.47
C9orf3-217ENST00000479161 RUNX1Q01196 453 aa12.09□□□□□ -0.47
C9orf3-217ENST00000479161 IL18Q14116 193 aa12.09□□□□□ -0.47
C9orf3-217ENST00000479161 MEF2DQ14814 521 aa12.09□□□□□ -0.47
C9orf3-217ENST00000479161 ZNF695Q8IW36 515 aa12.09□□□□□ -0.47
C9orf3-217ENST00000479161 SPAG16Q8N0X2 631 aa12.09□□□□□ -0.47
C9orf3-217ENST00000479161 TMEM167AQ8TBQ9 72 aa12.09□□□□□ -0.47
C9orf3-217ENST00000479161 DEDD2Q8WXF8 326 aa12.09□□□□□ -0.47
C9orf3-217ENST00000479161 RHOVQ96L33 236 aa12.09□□□□□ -0.47
C9orf3-217ENST00000479161 OR2A7Q96R45 310 aa12.09□□□□□ -0.47
C9orf3-217ENST00000479161 DCUN1D5Q9BTE7 237 aa12.09□□□□□ -0.47
C9orf3-217ENST00000479161 FXYD6Q9H0Q3 95 aa12.09□□□□□ -0.47
C9orf3-217ENST00000479161 SLA2Q9H6Q3 261 aa12.09□□□□□ -0.47
C9orf3-217ENST00000479161 TPSG1Q9NRR2 321 aa12.09□□□□□ -0.47
C9orf3-217ENST00000479161 BET1LQ9NYM9 111 aa12.09□□□□□ -0.47
C9orf3-217ENST00000479161 COMMD9Q9P000 198 aa12.09□□□□□ -0.47
C9orf3-217ENST00000479161 WSB1Q9Y6I7 421 aa12.09□□□□□ -0.47
C9orf3-217ENST00000479161 ARPC1BO15143 372 aaKnown RBP12.08□□□□□ -0.48
C9orf3-217ENST00000479161 CNIH1O95406 144 aa12.08□□□□□ -0.48
C9orf3-217ENST00000479161 RPLP1P05386 114 aaKnown RBP12.08□□□□□ -0.48
C9orf3-217ENST00000479161 IL6RP08887 468 aaPredicted RBP12.08□□□□□ -0.48
C9orf3-217ENST00000479161 NQO2P16083 231 aa12.08□□□□□ -0.48
C9orf3-217ENST00000479161 CD40LGP29965 261 aa12.08□□□□□ -0.48
C9orf3-217ENST00000479161 RAB9AP51151 201 aa12.08□□□□□ -0.48
C9orf3-217ENST00000479161 RND3P61587 244 aa12.08□□□□□ -0.48
C9orf3-217ENST00000479161 PJVKQ0ZLH3 352 aa12.08□□□□□ -0.48
C9orf3-217ENST00000479161 KIAA0141Q14154 515 aaPredicted RBP12.08□□□□□ -0.48
C9orf3-217ENST00000479161 STEAP1BQ6NZ63 245 aa12.08□□□□□ -0.48
C9orf3-217ENST00000479161 TMEM65Q6PI78 240 aa12.08□□□□□ -0.48
C9orf3-217ENST00000479161 TERB2Q8NHR7 220 aa12.08□□□□□ -0.48
C9orf3-217ENST00000479161 FAM110DQ8TAY7 271 aaPredicted RBP12.08□□□□□ -0.48
C9orf3-217ENST00000479161 SOX15O60248 233 aa12.07□□□□□ -0.48
C9orf3-217ENST00000479161 KBTBD11O94819 623 aa12.07□□□□□ -0.48
C9orf3-217ENST00000479161 RAB3DO95716 219 aa12.07□□□□□ -0.48
C9orf3-217ENST00000479161 PF4V1P10720 104 aa12.07□□□□□ -0.48
C9orf3-217ENST00000479161 MYCNOSP40205 109 aa12.07□□□□□ -0.48
C9orf3-217ENST00000479161 UNQ5815/PRO19632Q6UWF5 114 aa12.07□□□□□ -0.48
C9orf3-217ENST00000479161 CCDC190Q86UF4 302 aa12.07□□□□□ -0.48
C9orf3-217ENST00000479161 ZNF491Q8N8L2 437 aa12.07□□□□□ -0.48
C9orf3-217ENST00000479161 LFNGQ8NES3 379 aa12.07□□□□□ -0.48
C9orf3-217ENST00000479161 C4orf3Q8WVX3 66 aa12.07□□□□□ -0.48
C9orf3-217ENST00000479161 CLCC1Q96S66 551 aa12.07□□□□□ -0.48
C9orf3-217ENST00000479161 SPIN2AQ99865 258 aa12.07□□□□□ -0.48
C9orf3-217ENST00000479161 SPIN2BQ9BPZ2 258 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms