RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 KIR2DS1Q14954 304 aa17.8■□□□□ 0.44
SDF4-206ENST00000478938 RNASEKQ6P5S7 137 aaKnown RBP17.8■□□□□ 0.44
SDF4-206ENST00000478938 C20orf204Q6ZNR8 217 aa17.8■□□□□ 0.44
SDF4-206ENST00000478938 Q8N7P7 452 aa17.8■□□□□ 0.44
SDF4-206ENST00000478938 OR2D2Q9H210 308 aa17.8■□□□□ 0.44
SDF4-206ENST00000478938 CHD7Q9P2D1 2997 aa17.8■□□□□ 0.44
SDF4-206ENST00000478938 HAND1O96004 215 aa17.8■□□□□ 0.44
SDF4-206ENST00000478938 GABRA6Q16445 453 aa17.8■□□□□ 0.44
SDF4-206ENST00000478938 KIAA0895LQ68EN5 471 aa17.8■□□□□ 0.44
SDF4-206ENST00000478938 MRPL43Q8N983 215 aaKnown RBP17.8■□□□□ 0.44
SDF4-206ENST00000478938 IL1F10Q8WWZ1 152 aa17.8■□□□□ 0.44
SDF4-206ENST00000478938 PIGCQ92535 297 aa17.8■□□□□ 0.44
SDF4-206ENST00000478938 GTSF1LQ9H1H1 148 aa17.8■□□□□ 0.44
SDF4-206ENST00000478938 TECRQ9NZ01 308 aaKnown RBP17.8■□□□□ 0.44
SDF4-206ENST00000478938 SMPXQ9UHP9 88 aa17.8■□□□□ 0.44
SDF4-206ENST00000478938 PPIAL4EA0A075B759 164 aa17.79■□□□□ 0.44
SDF4-206ENST00000478938 PPIAL4CA0A0B4J2A2 164 aa17.79■□□□□ 0.44
SDF4-206ENST00000478938 PPIAL4DF5H284 164 aa17.79■□□□□ 0.44
SDF4-206ENST00000478938 IGLV2-14P01704 120 aa17.79■□□□□ 0.44
SDF4-206ENST00000478938 PPIAL4FP0DN26 164 aa17.79■□□□□ 0.44
SDF4-206ENST00000478938 AZU1P20160 251 aa17.79■□□□□ 0.44
SDF4-206ENST00000478938 PTGDSP41222 190 aa17.79■□□□□ 0.44
SDF4-206ENST00000478938 SPINK9Q5DT21 86 aa17.79■□□□□ 0.44
SDF4-206ENST00000478938 FOXL2NBQ6ZUU3 175 aa17.79■□□□□ 0.44
SDF4-206ENST00000478938 NABP1Q96AH0 204 aa17.79■□□□□ 0.44
SDF4-206ENST00000478938 OR1A1Q9P1Q5 309 aa17.79■□□□□ 0.44
SDF4-206ENST00000478938 BCL3P20749 454 aa17.79■□□□□ 0.44
SDF4-206ENST00000478938 SMAGPQ0VAQ4 97 aa17.79■□□□□ 0.44
SDF4-206ENST00000478938 ZNF776Q68DI1 518 aaPredicted RBP17.79■□□□□ 0.44
SDF4-206ENST00000478938 DOLPP1Q86YN1 238 aa17.79■□□□□ 0.44
SDF4-206ENST00000478938 ZDHHC16Q969W1 377 aa17.79■□□□□ 0.44
SDF4-206ENST00000478938 JMJD8Q96S16 334 aa17.79■□□□□ 0.44
SDF4-206ENST00000478938 NAA38Q9BRA0 125 aaKnown RBP17.79■□□□□ 0.44
SDF4-206ENST00000478938 COPS7AQ9UBW8 275 aa17.79■□□□□ 0.44
SDF4-206ENST00000478938 HS3ST3A1Q9Y663 406 aa17.79■□□□□ 0.44
SDF4-206ENST00000478938 IGKV3D-11A0A0A0MRZ8 115 aa17.78■□□□□ 0.44
SDF4-206ENST00000478938 HLA-DQA1P01909 254 aa17.78■□□□□ 0.44
SDF4-206ENST00000478938 FOXE3Q13461 319 aa17.78■□□□□ 0.44
SDF4-206ENST00000478938 ESPL1Q14674 2120 aa17.78■□□□□ 0.44
SDF4-206ENST00000478938 CLDN23Q96B33 292 aa17.78■□□□□ 0.44
SDF4-206ENST00000478938 CT55Q8WUE5 264 aa17.78■□□□□ 0.44
SDF4-206ENST00000478938 COMMD5Q9GZQ3 224 aa17.78■□□□□ 0.44
SDF4-206ENST00000478938 A0A1B0GV72 72 aa17.77■□□□□ 0.44
SDF4-206ENST00000478938 ZG16O60844 167 aa17.77■□□□□ 0.44
SDF4-206ENST00000478938 FOXL2P58012 376 aa17.77■□□□□ 0.44
SDF4-206ENST00000478938 OR5A2Q8NGI9 324 aa17.77■□□□□ 0.44
SDF4-206ENST00000478938 TMEM45BQ96B21 275 aa17.77■□□□□ 0.44
SDF4-206ENST00000478938 OXGR1Q96P68 337 aa17.77■□□□□ 0.44
SDF4-206ENST00000478938 KCNS2Q9ULS6 477 aa17.77■□□□□ 0.44
SDF4-206ENST00000478938 UNC13CQ8NB66 2214 aa17.77■□□□□ 0.44
SDF4-206ENST00000478938 PPOXP50336 477 aa17.77■□□□□ 0.43
SDF4-206ENST00000478938 C17orf67Q0P5P2 114 aa17.77■□□□□ 0.43
SDF4-206ENST00000478938 ZNF718Q3SXZ3 478 aa17.77■□□□□ 0.43
SDF4-206ENST00000478938 FGFRL1Q8N441 504 aa17.77■□□□□ 0.43
SDF4-206ENST00000478938 ULBP2Q9BZM5 246 aa17.77■□□□□ 0.43
SDF4-206ENST00000478938 TMEM38BQ9NVV0 291 aa17.77■□□□□ 0.43
SDF4-206ENST00000478938 OR51B2Q9Y5P1 312 aa17.77■□□□□ 0.43
SDF4-206ENST00000478938 SH2D7A6NKC9 451 aaPredicted RBP17.76■□□□□ 0.43
SDF4-206ENST00000478938 HHEXQ03014 270 aa17.76■□□□□ 0.43
SDF4-206ENST00000478938 SCGB2A2Q13296 93 aa17.76■□□□□ 0.43
SDF4-206ENST00000478938 TMEM42Q69YG0 159 aa17.76■□□□□ 0.43
SDF4-206ENST00000478938 NEGR1Q7Z3B1 354 aa17.76■□□□□ 0.43
SDF4-206ENST00000478938 ZNF441Q8N8Z8 693 aa17.76■□□□□ 0.43
SDF4-206ENST00000478938 TMEM70Q9BUB7 260 aa17.76■□□□□ 0.43
SDF4-206ENST00000478938 CLCF1Q9UBD9 225 aa17.76■□□□□ 0.43
SDF4-206ENST00000478938 PIGBOS1A0A0B4J2F0 54 aa17.76■□□□□ 0.43
SDF4-206ENST00000478938 MT-CO2P00403 227 aa17.76■□□□□ 0.43
SDF4-206ENST00000478938 CA3P07451 260 aa17.75■□□□□ 0.43
SDF4-206ENST00000478938 USF1P22415 310 aaPredicted RBP17.75■□□□□ 0.43
SDF4-206ENST00000478938 GTF2H5Q6ZYL4 71 aa17.75■□□□□ 0.43
SDF4-206ENST00000478938 OR2T6Q8NHC8 308 aa17.75■□□□□ 0.43
SDF4-206ENST00000478938 UBALD1Q8TB05 177 aa17.75■□□□□ 0.43
SDF4-206ENST00000478938 CPT1CQ8TCG5 803 aa17.75■□□□□ 0.43
SDF4-206ENST00000478938 RAB1CQ92928 201 aa17.75■□□□□ 0.43
SDF4-206ENST00000478938 ZNF837Q96EG3 531 aaPredicted RBP17.75■□□□□ 0.43
SDF4-206ENST00000478938 WDR54Q9H977 334 aa17.75■□□□□ 0.43
SDF4-206ENST00000478938 TNFSF11O14788 317 aa17.75■□□□□ 0.43
SDF4-206ENST00000478938 SRSF7Q16629 238 aaKnown RBP eCLIP17.75■□□□□ 0.43
SDF4-206ENST00000478938 TMEM249Q2WGJ8 235 aa17.75■□□□□ 0.43
SDF4-206ENST00000478938 SPACA3Q8IXA5 215 aa17.75■□□□□ 0.43
SDF4-206ENST00000478938 TNFRSF19Q9NS68 423 aa17.75■□□□□ 0.43
SDF4-206ENST00000478938 THYN1Q9P016 225 aa17.75■□□□□ 0.43
SDF4-206ENST00000478938 FAM90A26D6RGX4 464 aa17.74■□□□□ 0.43
SDF4-206ENST00000478938 CENPWQ5EE01 88 aa17.74■□□□□ 0.43
SDF4-206ENST00000478938 PRR31Q5SQ13 230 aa17.74■□□□□ 0.43
SDF4-206ENST00000478938 ASPHD1Q5U4P2 390 aa17.74■□□□□ 0.43
SDF4-206ENST00000478938 CFAP161Q6P656 301 aa17.74■□□□□ 0.43
SDF4-206ENST00000478938 LINC00173Q6ZV60 143 aa17.74■□□□□ 0.43
SDF4-206ENST00000478938 IGHV3-20A0A0C4DH32 117 aa17.74■□□□□ 0.43
SDF4-206ENST00000478938 TLX3O43711 291 aaPredicted RBP17.74■□□□□ 0.43
SDF4-206ENST00000478938 MGST1P10620 155 aaKnown RBP17.74■□□□□ 0.43
SDF4-206ENST00000478938 UQCRFS1P47985 274 aa17.74■□□□□ 0.43
SDF4-206ENST00000478938 VWC2Q2TAL6 325 aa17.74■□□□□ 0.43
SDF4-206ENST00000478938 ATP6V0BQ99437 205 aa17.74■□□□□ 0.43
SDF4-206ENST00000478938 TXNDC17Q9BRA2 123 aa17.74■□□□□ 0.43
SDF4-206ENST00000478938 C9JCJ5 164 aa17.73■□□□□ 0.43
SDF4-206ENST00000478938 C3orf80F5H4A9 247 aa17.73■□□□□ 0.43
SDF4-206ENST00000478938 CRYGSP22914 178 aa17.73■□□□□ 0.43
SDF4-206ENST00000478938 CRYBB3P26998 211 aa17.73■□□□□ 0.43
SDF4-206ENST00000478938 RHBDD2Q6NTF9 364 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms