RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 ATP1A1-AS1Q5TC04 95 aa4.12□□□□□ -1.75
SF3B6-202ENST00000478050 ZNF66Q6ZN08 573 aa4.12□□□□□ -1.75
SF3B6-202ENST00000478050 ACP7Q6ZNF0 438 aa4.12□□□□□ -1.75
SF3B6-202ENST00000478050 Q6ZRM9 215 aa4.12□□□□□ -1.75
SF3B6-202ENST00000478050 SLC35E3Q7Z769 313 aa4.12□□□□□ -1.75
SF3B6-202ENST00000478050 ZNF525Q8N782 197 aa4.12□□□□□ -1.75
SF3B6-202ENST00000478050 WDR31Q8NA23 367 aa4.12□□□□□ -1.75
SF3B6-202ENST00000478050 CLDND2Q8NHS1 167 aa4.12□□□□□ -1.75
SF3B6-202ENST00000478050 KLF14Q8TD94 323 aaPredicted RBP4.12□□□□□ -1.75
SF3B6-202ENST00000478050 C2CD4CQ8TF44 421 aa4.12□□□□□ -1.75
SF3B6-202ENST00000478050 FAM216AQ8WUB2 273 aa4.12□□□□□ -1.75
SF3B6-202ENST00000478050 MBD3L1Q8WWY6 194 aa4.12□□□□□ -1.75
SF3B6-202ENST00000478050 TVP23CQ96ET8 276 aa4.12□□□□□ -1.75
SF3B6-202ENST00000478050 SNX22Q96L94 193 aa4.12□□□□□ -1.75
SF3B6-202ENST00000478050 LURAP1Q96LR2 239 aa4.12□□□□□ -1.75
SF3B6-202ENST00000478050 TAAR6Q96RI8 345 aa4.12□□□□□ -1.75
SF3B6-202ENST00000478050 RARRES2Q99969 163 aa4.12□□□□□ -1.75
SF3B6-202ENST00000478050 TCEAL7Q9BRU2 100 aa4.12□□□□□ -1.75
SF3B6-202ENST00000478050 C20orf24Q9BUV8 137 aa4.12□□□□□ -1.75
SF3B6-202ENST00000478050 ESRP2Q9H6T0 727 aaKnown RBP4.12□□□□□ -1.75
SF3B6-202ENST00000478050 SEBOXQ9HB31 216 aaPredicted RBP4.12□□□□□ -1.75
SF3B6-202ENST00000478050 SIRT7Q9NRC8 400 aa4.12□□□□□ -1.75
SF3B6-202ENST00000478050 CISD1Q9NZ45 108 aaKnown RBP4.12□□□□□ -1.75
SF3B6-202ENST00000478050 OR14J1Q9UGF5 321 aa4.12□□□□□ -1.75
SF3B6-202ENST00000478050 LAMP3Q9UQV4 416 aa4.12□□□□□ -1.75
SF3B6-202ENST00000478050 PUS1Q9Y606 427 aaKnown RBP eCLIP4.12□□□□□ -1.75
SF3B6-202ENST00000478050 DOCK11Q5JSL3 2073 aa4.12□□□□□ -1.75
SF3B6-202ENST00000478050 TRAV39A0A0B4J263 110 aa4.11□□□□□ -1.75
SF3B6-202ENST00000478050 A0A1B0GWJ7 208 aa4.11□□□□□ -1.75
SF3B6-202ENST00000478050 A0A1W2PPE2 198 aa4.11□□□□□ -1.75
SF3B6-202ENST00000478050 CXorf65A6NEN9 183 aa4.11□□□□□ -1.75
SF3B6-202ENST00000478050 C5orf52A6NGY3 159 aa4.11□□□□□ -1.75
SF3B6-202ENST00000478050 AHRRA9YTQ3 701 aa4.11□□□□□ -1.75
SF3B6-202ENST00000478050 C12orf77C9JDV5 145 aa4.11□□□□□ -1.75
SF3B6-202ENST00000478050 H0YL77 283 aa4.11□□□□□ -1.75
SF3B6-202ENST00000478050 H3BQ15 152 aa4.11□□□□□ -1.75
SF3B6-202ENST00000478050 K7ENP7 123 aa4.11□□□□□ -1.75
SF3B6-202ENST00000478050 UBE2CO00762 179 aa4.11□□□□□ -1.75
SF3B6-202ENST00000478050 RAB29O14966 203 aa4.11□□□□□ -1.75
SF3B6-202ENST00000478050 CLDN14O95500 239 aa4.11□□□□□ -1.75
SF3B6-202ENST00000478050 IGLV1-44P01699 117 aa4.11□□□□□ -1.75
SF3B6-202ENST00000478050 HBZP02008 142 aa4.11□□□□□ -1.75
SF3B6-202ENST00000478050 MBP02144 154 aa4.11□□□□□ -1.75
SF3B6-202ENST00000478050 S100A9P06702 114 aaKnown RBP4.11□□□□□ -1.75
SF3B6-202ENST00000478050 METTL15P1P0C7V9 234 aa4.11□□□□□ -1.75
SF3B6-202ENST00000478050 P0C879 139 aa4.11□□□□□ -1.75
SF3B6-202ENST00000478050 SMIM6P0DI80 62 aa4.11□□□□□ -1.75
SF3B6-202ENST00000478050 BCL2P10415 239 aa4.11□□□□□ -1.75
SF3B6-202ENST00000478050 GYPEP15421 78 aa4.11□□□□□ -1.75
SF3B6-202ENST00000478050 GCH1P30793 250 aa4.11□□□□□ -1.75
SF3B6-202ENST00000478050 TAGLN2P37802 199 aaKnown RBP4.11□□□□□ -1.75
SF3B6-202ENST00000478050 MEOX2P50222 304 aa4.11□□□□□ -1.75
SF3B6-202ENST00000478050 CCL11P51671 97 aa4.11□□□□□ -1.75
SF3B6-202ENST00000478050 UBE2KP61086 200 aa4.11□□□□□ -1.75
SF3B6-202ENST00000478050 RPS23P62266 143 aaKnown RBP4.11□□□□□ -1.75
SF3B6-202ENST00000478050 PAX5Q02548 391 aa4.11□□□□□ -1.75
SF3B6-202ENST00000478050 TNFRSF9Q07011 255 aa4.11□□□□□ -1.75
SF3B6-202ENST00000478050 SLC38A11Q08AI6 406 aa4.11□□□□□ -1.75
SF3B6-202ENST00000478050 PNRC1Q12796 327 aaPredicted RBP4.11□□□□□ -1.75
SF3B6-202ENST00000478050 EIF4EBP1Q13541 118 aaPredicted RBP4.11□□□□□ -1.75
SF3B6-202ENST00000478050 EIF2S3LQ2VIR3 472 aaKnown RBP4.11□□□□□ -1.75
SF3B6-202ENST00000478050 TMEM41BQ5BJD5 291 aa4.11□□□□□ -1.75
SF3B6-202ENST00000478050 WDR82Q6UXN9 313 aa4.11□□□□□ -1.75
SF3B6-202ENST00000478050 TMEM14EPQ6UXP3 125 aa4.11□□□□□ -1.75
SF3B6-202ENST00000478050 CENPVQ7Z7K6 275 aaPredicted RBP4.11□□□□□ -1.75
SF3B6-202ENST00000478050 HAPLN4Q86UW8 402 aa4.11□□□□□ -1.75
SF3B6-202ENST00000478050 VASH2Q86V25 355 aa4.11□□□□□ -1.75
SF3B6-202ENST00000478050 ZNF429Q86V71 674 aa4.11□□□□□ -1.75
SF3B6-202ENST00000478050 C11orf53Q8IXP5 236 aa4.11□□□□□ -1.75
SF3B6-202ENST00000478050 GCNT2Q8N0V5 402 aa4.11□□□□□ -1.75
SF3B6-202ENST00000478050 ZFP82Q8N141 532 aa4.11□□□□□ -1.75
SF3B6-202ENST00000478050 FGFRL1Q8N441 504 aa4.11□□□□□ -1.75
SF3B6-202ENST00000478050 FAM24BQ8N5W8 94 aa4.11□□□□□ -1.75
SF3B6-202ENST00000478050 CNEP1R1Q8N9A8 125 aa4.11□□□□□ -1.75
SF3B6-202ENST00000478050 C9orf106Q8NAJ2 232 aa4.11□□□□□ -1.75
SF3B6-202ENST00000478050 FDCSPQ8NFU4 85 aa4.11□□□□□ -1.75
SF3B6-202ENST00000478050 OR1L1Q8NH94 360 aa4.11□□□□□ -1.75
SF3B6-202ENST00000478050 RAB39BQ96DA2 213 aa4.11□□□□□ -1.75
SF3B6-202ENST00000478050 MUCL1Q96DR8 90 aa4.11□□□□□ -1.75
SF3B6-202ENST00000478050 COQ2Q96H96 371 aa4.11□□□□□ -1.75
SF3B6-202ENST00000478050 YPEL4Q96NS1 127 aa4.11□□□□□ -1.75
SF3B6-202ENST00000478050 CIB3Q96Q77 187 aaPredicted RBP4.11□□□□□ -1.75
SF3B6-202ENST00000478050 P2RX4Q99571 388 aa4.11□□□□□ -1.75
SF3B6-202ENST00000478050 C12orf57Q99622 126 aa4.11□□□□□ -1.75
SF3B6-202ENST00000478050 HSD17B10Q99714 261 aaKnown RBP4.11□□□□□ -1.75
SF3B6-202ENST00000478050 NIPSNAP3BQ9BS92 247 aa4.11□□□□□ -1.75
SF3B6-202ENST00000478050 TMEM147Q9BVK8 224 aa4.11□□□□□ -1.75
SF3B6-202ENST00000478050 MRPL37Q9BZE1 423 aaKnown RBP4.11□□□□□ -1.75
SF3B6-202ENST00000478050 WDR61Q9GZS3 305 aaKnown RBP4.11□□□□□ -1.75
SF3B6-202ENST00000478050 OR2D2Q9H210 308 aa4.11□□□□□ -1.75
SF3B6-202ENST00000478050 RBKSQ9H477 322 aa4.11□□□□□ -1.75
SF3B6-202ENST00000478050 PLSCR4Q9NRQ2 329 aa4.11□□□□□ -1.75
SF3B6-202ENST00000478050 RPRMQ9NS64 109 aa4.11□□□□□ -1.75
SF3B6-202ENST00000478050 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.11□□□□□ -1.75
SF3B6-202ENST00000478050 METTL1Q9UBP6 276 aaKnown RBP4.11□□□□□ -1.75
SF3B6-202ENST00000478050 HSPB7Q9UBY9 170 aa4.11□□□□□ -1.75
SF3B6-202ENST00000478050 TINAGQ9UJW2 476 aa4.11□□□□□ -1.75
SF3B6-202ENST00000478050 PROCRQ9UNN8 238 aa4.11□□□□□ -1.75
SF3B6-202ENST00000478050 RFNGQ9Y644 331 aa4.11□□□□□ -1.75
SF3B6-202ENST00000478050 RAI1Q7Z5J4 1906 aaPredicted RBP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms