RNA–Protein interactions for RNA: ENST00000477939.1

TRA2B-211, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-211ENST00000477939 USF3Q68DE3 2245 aa4.99□□□□□ -1.61
TRA2B-211ENST00000477939 TRAV36DV7A0A075B6V5 113 aa4.99□□□□□ -1.61
TRA2B-211ENST00000477939 A0A0G2JLM5 398 aa4.99□□□□□ -1.61
TRA2B-211ENST00000477939 TRBV4-1A0A0J9YWV2 114 aa4.99□□□□□ -1.61
TRA2B-211ENST00000477939 PRSS37A4D1T9 235 aa4.99□□□□□ -1.61
TRA2B-211ENST00000477939 DEFB108AA8MXU0 73 aa4.99□□□□□ -1.61
TRA2B-211ENST00000477939 GABARAPH6UMI1 98 aa4.99□□□□□ -1.61
TRA2B-211ENST00000477939 CDC42EP2O14613 210 aa4.99□□□□□ -1.61
TRA2B-211ENST00000477939 AGPAT2O15120 278 aa4.99□□□□□ -1.61
TRA2B-211ENST00000477939 NBR2O15453 112 aa4.99□□□□□ -1.61
TRA2B-211ENST00000477939 DHRS3O75911 302 aa4.99□□□□□ -1.61
TRA2B-211ENST00000477939 OR7C1O76099 320 aaPredicted RBP4.99□□□□□ -1.61
TRA2B-211ENST00000477939 PTHP01270 115 aa4.99□□□□□ -1.61
TRA2B-211ENST00000477939 HPXP02790 462 aa4.99□□□□□ -1.61
TRA2B-211ENST00000477939 HLA-DPB1P04440 258 aa4.99□□□□□ -1.61
TRA2B-211ENST00000477939 IFNW1P05000 195 aa4.99□□□□□ -1.61
TRA2B-211ENST00000477939 CT45A6P0DMU7 189 aa4.99□□□□□ -1.61
TRA2B-211ENST00000477939 CT45A5P0DMU8 189 aa4.99□□□□□ -1.61
TRA2B-211ENST00000477939 CT45A10P0DMU9 189 aa4.99□□□□□ -1.61
TRA2B-211ENST00000477939 CT45A7P0DMV0 189 aa4.99□□□□□ -1.61
TRA2B-211ENST00000477939 TIA1P31483 386 aaKnown RBP eCLIP4.99□□□□□ -1.613e-8■■■■□ 24
TRA2B-211ENST00000477939 P2RY1P47900 373 aa4.99□□□□□ -1.61
TRA2B-211ENST00000477939 MANFP55145 182 aaKnown RBP4.99□□□□□ -1.61
TRA2B-211ENST00000477939 LTBQ06643 244 aa4.99□□□□□ -1.61
TRA2B-211ENST00000477939 ZNF415Q09FC8 603 aa4.99□□□□□ -1.61
TRA2B-211ENST00000477939 MRPL23Q16540 153 aaKnown RBP4.99□□□□□ -1.61
TRA2B-211ENST00000477939 CT45A1Q5HYN5 189 aa4.99□□□□□ -1.61
TRA2B-211ENST00000477939 ZNF678Q5SXM1 525 aa4.99□□□□□ -1.61
TRA2B-211ENST00000477939 UNQ5815/PRO19632Q6UWF5 114 aa4.99□□□□□ -1.61
TRA2B-211ENST00000477939 BTNL8Q6UX41 500 aa4.99□□□□□ -1.61
TRA2B-211ENST00000477939 TMEM91Q6ZNR0 172 aa4.99□□□□□ -1.61
TRA2B-211ENST00000477939 ZNF788Q6ZQV5 615 aa4.99□□□□□ -1.61
TRA2B-211ENST00000477939 Q71RC1 249 aaPredicted RBP4.99□□□□□ -1.61
TRA2B-211ENST00000477939 C16orf82Q7Z2V1 217 aa4.99□□□□□ -1.61
TRA2B-211ENST00000477939 OR8G5Q8NG78 346 aa4.99□□□□□ -1.61
TRA2B-211ENST00000477939 OR2M3Q8NG83 312 aa4.99□□□□□ -1.61
TRA2B-211ENST00000477939 OR52E2Q8NGJ4 325 aa4.99□□□□□ -1.61
TRA2B-211ENST00000477939 CT45A3Q8NHU0 189 aa4.99□□□□□ -1.61
TRA2B-211ENST00000477939 SYNPRQ8TBG9 265 aa4.99□□□□□ -1.61
TRA2B-211ENST00000477939 ABHD5Q8WTS1 349 aa4.99□□□□□ -1.61
TRA2B-211ENST00000477939 NUDT8Q8WV74 236 aa4.99□□□□□ -1.61
TRA2B-211ENST00000477939 TMEM170AQ8WVE7 144 aa4.99□□□□□ -1.61
TRA2B-211ENST00000477939 FLYWCH2Q96CP2 140 aaKnown RBP4.99□□□□□ -1.61
TRA2B-211ENST00000477939 RNF183Q96D59 192 aa4.99□□□□□ -1.61
TRA2B-211ENST00000477939 STARD4Q96DR4 205 aa4.99□□□□□ -1.61
TRA2B-211ENST00000477939 C18orf12Q96KH6 178 aa4.99□□□□□ -1.61
TRA2B-211ENST00000477939 C20orf173Q96LM9 149 aa4.99□□□□□ -1.61
TRA2B-211ENST00000477939 NKX3-1Q99801 234 aaPredicted RBP4.99□□□□□ -1.61
TRA2B-211ENST00000477939 C1orf43Q9BWL3 253 aa4.99□□□□□ -1.61
TRA2B-211ENST00000477939 EBPLQ9BY08 206 aa4.99□□□□□ -1.61
TRA2B-211ENST00000477939 IFI27L2Q9H2X8 130 aa4.99□□□□□ -1.61
TRA2B-211ENST00000477939 MS4A5Q9H3V2 200 aa4.99□□□□□ -1.61
TRA2B-211ENST00000477939 ZNF319Q9P2F9 582 aa4.99□□□□□ -1.61
TRA2B-211ENST00000477939 LSM5Q9Y4Y9 91 aaKnown RBP4.99□□□□□ -1.61
TRA2B-211ENST00000477939 RFNGQ9Y644 331 aa4.99□□□□□ -1.61
TRA2B-211ENST00000477939 HIVEP2P31629 2446 aa4.99□□□□□ -1.61
TRA2B-211ENST00000477939 ANK3Q12955 4377 aaKnown RBP4.99□□□□□ -1.61
TRA2B-211ENST00000477939 SONP18583 2426 aaKnown RBP4.98□□□□□ -1.61
TRA2B-211ENST00000477939 CENPVL1A0A0U1RR11 272 aa4.98□□□□□ -1.61
TRA2B-211ENST00000477939 A0A0U1RRA0 63 aa4.98□□□□□ -1.61
TRA2B-211ENST00000477939 MSTNO14793 375 aa4.98□□□□□ -1.61
TRA2B-211ENST00000477939 FCN3O75636 299 aa4.98□□□□□ -1.61
TRA2B-211ENST00000477939 NDUFB6O95139 128 aa4.98□□□□□ -1.61
TRA2B-211ENST00000477939 PMS2P2O95744 297 aa4.98□□□□□ -1.61
TRA2B-211ENST00000477939 MOSP00540 346 aa4.98□□□□□ -1.61
TRA2B-211ENST00000477939 CGAP01215 116 aa4.98□□□□□ -1.61
TRA2B-211ENST00000477939 SEC11BP0C7V7 166 aa4.98□□□□□ -1.61
TRA2B-211ENST00000477939 FAM157CP0CG43 387 aa4.98□□□□□ -1.61
TRA2B-211ENST00000477939 IGLC2P0DOY2 106 aa4.98□□□□□ -1.61
TRA2B-211ENST00000477939 IGLC3P0DOY3 106 aa4.98□□□□□ -1.61
TRA2B-211ENST00000477939 PPIBP23284 216 aaKnown RBP4.98□□□□□ -1.61
TRA2B-211ENST00000477939 CAMPP49913 170 aa4.98□□□□□ -1.61
TRA2B-211ENST00000477939 DIO3P55073 304 aa4.98□□□□□ -1.61
TRA2B-211ENST00000477939 FOXA1P55317 472 aa4.98□□□□□ -1.61
TRA2B-211ENST00000477939 DSCR4P56555 118 aaPredicted RBP4.98□□□□□ -1.61
TRA2B-211ENST00000477939 UFM1P61960 85 aa4.98□□□□□ -1.61
TRA2B-211ENST00000477939 SIRPAP78324 504 aa4.98□□□□□ -1.61
TRA2B-211ENST00000477939 PLP2Q04941 152 aa4.98□□□□□ -1.61
TRA2B-211ENST00000477939 ACSM2AQ08AH3 577 aa4.98□□□□□ -1.61
TRA2B-211ENST00000477939 FAM27E3Q08E93 113 aa4.98□□□□□ -1.61
TRA2B-211ENST00000477939 KLF9Q13886 244 aaPredicted RBP4.98□□□□□ -1.61
TRA2B-211ENST00000477939 GINS1Q14691 196 aa4.98□□□□□ -1.61
TRA2B-211ENST00000477939 GUSBP1Q15486 140 aa4.98□□□□□ -1.61
TRA2B-211ENST00000477939 OTPQ5XKR4 325 aa4.98□□□□□ -1.61
TRA2B-211ENST00000477939 ACSM2BQ68CK6 577 aa4.98□□□□□ -1.61
TRA2B-211ENST00000477939 HBMQ6B0K9 141 aa4.98□□□□□ -1.61
TRA2B-211ENST00000477939 AMMECR1LQ6DCA0 310 aa4.98□□□□□ -1.61
TRA2B-211ENST00000477939 UFSP1Q6NVU6 142 aa4.98□□□□□ -1.61
TRA2B-211ENST00000477939 TNFAIP8L2Q6P589 184 aaPredicted RBP4.98□□□□□ -1.61
TRA2B-211ENST00000477939 ZNF474Q6S9Z5 364 aaPredicted RBP4.98□□□□□ -1.61
TRA2B-211ENST00000477939 C22orf34Q6ZV56 151 aa4.98□□□□□ -1.61
TRA2B-211ENST00000477939 ZNF550Q7Z398 422 aa4.98□□□□□ -1.61
TRA2B-211ENST00000477939 CALHM3Q86XJ0 350 aa4.98□□□□□ -1.61
TRA2B-211ENST00000477939 APRG1Q8IVJ8 170 aa4.98□□□□□ -1.61
TRA2B-211ENST00000477939 CIARTQ8N365 385 aaPredicted RBP4.98□□□□□ -1.61
TRA2B-211ENST00000477939 IQCF1Q8N6M8 205 aa4.98□□□□□ -1.61
TRA2B-211ENST00000477939 ZDHHC22Q8N966 263 aa4.98□□□□□ -1.61
TRA2B-211ENST00000477939 CNEP1R1Q8N9A8 125 aa4.98□□□□□ -1.61
TRA2B-211ENST00000477939 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.98□□□□□ -1.61
TRA2B-211ENST00000477939 GPR32P1Q8NGA4 272 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms