RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 OVOL1O14753 267 aa7.5□□□□□ -1.21
SMARCB1-206ENST00000477836 PPYP01298 95 aa7.5□□□□□ -1.21
SMARCB1-206ENST00000477836 RLN1P04808 185 aa7.5□□□□□ -1.21
SMARCB1-206ENST00000477836 H2AFB2P0C5Z0 115 aa7.5□□□□□ -1.21
SMARCB1-206ENST00000477836 MED14OSP0DP75 135 aa7.5□□□□□ -1.21
SMARCB1-206ENST00000477836 PGAM2P15259 253 aa7.5□□□□□ -1.21
SMARCB1-206ENST00000477836 AADACP22760 399 aa7.5□□□□□ -1.21
SMARCB1-206ENST00000477836 NFYAP23511 347 aaPredicted RBP7.5□□□□□ -1.21
SMARCB1-206ENST00000477836 HTD2P86397 168 aa7.5□□□□□ -1.21
SMARCB1-206ENST00000477836 ZNF616Q08AN1 781 aa7.5□□□□□ -1.21
SMARCB1-206ENST00000477836 FOXE3Q13461 319 aa7.5□□□□□ -1.21
SMARCB1-206ENST00000477836 GNMTQ14749 295 aa7.5□□□□□ -1.21
SMARCB1-206ENST00000477836 SURF2Q15527 256 aaPredicted RBP7.5□□□□□ -1.21
SMARCB1-206ENST00000477836 LTC4SQ16873 150 aa7.5□□□□□ -1.21
SMARCB1-206ENST00000477836 PRAMEF5Q5TYX0 476 aa7.5□□□□□ -1.21
SMARCB1-206ENST00000477836 ASPHD1Q5U4P2 390 aa7.5□□□□□ -1.21
SMARCB1-206ENST00000477836 ZNF660Q6AZW8 331 aaPredicted RBP7.5□□□□□ -1.21
SMARCB1-206ENST00000477836 Q6ZNX1 250 aa7.5□□□□□ -1.21
SMARCB1-206ENST00000477836 H1FOOQ8IZA3 346 aaPredicted RBP7.5□□□□□ -1.21
SMARCB1-206ENST00000477836 FAM71E2Q8N5Q1 922 aa7.5□□□□□ -1.21
SMARCB1-206ENST00000477836 OR1N2Q8NGR9 330 aa7.5□□□□□ -1.21
SMARCB1-206ENST00000477836 ZNF596Q8TC21 504 aa7.5□□□□□ -1.21
SMARCB1-206ENST00000477836 MARCH1Q8TCQ1 289 aa7.5□□□□□ -1.21
SMARCB1-206ENST00000477836 GIMAP1Q8WWP7 306 aa7.5□□□□□ -1.21
SMARCB1-206ENST00000477836 CORO2AQ92828 525 aa7.5□□□□□ -1.21
SMARCB1-206ENST00000477836 MRGPRFQ96AM1 343 aa7.5□□□□□ -1.21
SMARCB1-206ENST00000477836 MOB3AQ96BX8 217 aa7.5□□□□□ -1.21
SMARCB1-206ENST00000477836 SCGB3A2Q96PL1 93 aa7.5□□□□□ -1.21
SMARCB1-206ENST00000477836 MARVELD1Q9BSK0 173 aa7.5□□□□□ -1.21
SMARCB1-206ENST00000477836 KRTAP4-5Q9BYR2 181 aa7.5□□□□□ -1.21
SMARCB1-206ENST00000477836 OR2S2Q9NQN1 319 aa7.5□□□□□ -1.21
SMARCB1-206ENST00000477836 TAS2R3Q9NYW6 316 aa7.5□□□□□ -1.21
SMARCB1-206ENST00000477836 C14orf166Q9Y224 244 aaKnown RBP7.5□□□□□ -1.21
SMARCB1-206ENST00000477836 DSCAML1Q8TD84 2053 aa7.5□□□□□ -1.21
SMARCB1-206ENST00000477836 MUC4Q99102 2169 aa7.49□□□□□ -1.21
SMARCB1-206ENST00000477836 OR5H14A6NHG9 310 aa7.49□□□□□ -1.21
SMARCB1-206ENST00000477836 AP4M1O00189 453 aa7.49□□□□□ -1.21
SMARCB1-206ENST00000477836 FGF16O43320 207 aa7.49□□□□□ -1.21
SMARCB1-206ENST00000477836 TUSC2O75896 110 aa7.49□□□□□ -1.21
SMARCB1-206ENST00000477836 MMP23AO75900 390 aa7.49□□□□□ -1.21
SMARCB1-206ENST00000477836 RGS11O94810 467 aa7.49□□□□□ -1.21
SMARCB1-206ENST00000477836 DHFRP00374 187 aa7.49□□□□□ -1.21
SMARCB1-206ENST00000477836 ELANEP08246 267 aa7.49□□□□□ -1.21
SMARCB1-206ENST00000477836 TMEM11P17152 192 aa7.49□□□□□ -1.21
SMARCB1-206ENST00000477836 ANXA7P20073 488 aaKnown RBP7.49□□□□□ -1.21
SMARCB1-206ENST00000477836 PPP1CCP36873 323 aaKnown RBP7.49□□□□□ -1.21
SMARCB1-206ENST00000477836 CEACAM3P40198 252 aa7.49□□□□□ -1.21
SMARCB1-206ENST00000477836 TAS2R31P59538 309 aa7.49□□□□□ -1.21
SMARCB1-206ENST00000477836 HES1Q14469 280 aa7.49□□□□□ -1.21
SMARCB1-206ENST00000477836 HNF4GQ14541 408 aa7.49□□□□□ -1.21
SMARCB1-206ENST00000477836 TATDN3Q17R31 274 aa7.49□□□□□ -1.21
SMARCB1-206ENST00000477836 C17orf58Q2M2W7 97 aa7.49□□□□□ -1.21
SMARCB1-206ENST00000477836 TPTE2P1Q5T6R2 138 aa7.49□□□□□ -1.21
SMARCB1-206ENST00000477836 AADACL3Q5VUY0 350 aa7.49□□□□□ -1.21
SMARCB1-206ENST00000477836 DHRS11Q6UWP2 260 aa7.49□□□□□ -1.21
SMARCB1-206ENST00000477836 C5orf24Q7Z6I8 188 aa7.49□□□□□ -1.21
SMARCB1-206ENST00000477836 SLC38A6Q8IZM9 456 aa7.49□□□□□ -1.21
SMARCB1-206ENST00000477836 RNF152Q8N8N0 203 aa7.49□□□□□ -1.21
SMARCB1-206ENST00000477836 OR52L2PQ8NGH6 319 aa7.49□□□□□ -1.21
SMARCB1-206ENST00000477836 OR10V1Q8NGI7 309 aa7.49□□□□□ -1.21
SMARCB1-206ENST00000477836 RFESDQ8TAC1 157 aa7.49□□□□□ -1.21
SMARCB1-206ENST00000477836 GON7Q9BXV9 100 aa7.49□□□□□ -1.21
SMARCB1-206ENST00000477836 GHITMQ9H3K2 345 aa7.49□□□□□ -1.21
SMARCB1-206ENST00000477836 RDH8Q9NYR8 311 aa7.49□□□□□ -1.21
SMARCB1-206ENST00000477836 IDI2-AS1Q9NZ38 188 aa7.49□□□□□ -1.21
SMARCB1-206ENST00000477836 FLVCR2Q9UPI3 526 aa7.49□□□□□ -1.21
SMARCB1-206ENST00000477836 VSIG4Q9Y279 399 aa7.49□□□□□ -1.21
SMARCB1-206ENST00000477836 OR2W1Q9Y3N9 320 aa7.49□□□□□ -1.21
SMARCB1-206ENST00000477836 HSPG2P98160 4391 aa7.48□□□□□ -1.21
SMARCB1-206ENST00000477836 IGHV3-43A0A0B4J1X8 118 aa7.48□□□□□ -1.21
SMARCB1-206ENST00000477836 PRAF2O60831 178 aa7.48□□□□□ -1.21
SMARCB1-206ENST00000477836 IGLV1-47P01700 117 aa7.48□□□□□ -1.21
SMARCB1-206ENST00000477836 IGHV3-43DP0DP04 118 aa7.48□□□□□ -1.21
SMARCB1-206ENST00000477836 NFYBP25208 207 aa7.48□□□□□ -1.21
SMARCB1-206ENST00000477836 CEACAM6P40199 344 aa7.48□□□□□ -1.21
SMARCB1-206ENST00000477836 C4orf46Q504U0 113 aa7.48□□□□□ -1.21
SMARCB1-206ENST00000477836 CCDC144NLQ6NUI1 221 aa7.48□□□□□ -1.21
SMARCB1-206ENST00000477836 LPCAT3Q6P1A2 487 aa7.48□□□□□ -1.21
SMARCB1-206ENST00000477836 HEPN1Q6WQI6 88 aa7.48□□□□□ -1.21
SMARCB1-206ENST00000477836 OR2AK2Q8NG84 335 aa7.48□□□□□ -1.21
SMARCB1-206ENST00000477836 OR10A7Q8NGE5 316 aa7.48□□□□□ -1.21
SMARCB1-206ENST00000477836 ZFAND1Q8TCF1 268 aa7.48□□□□□ -1.21
SMARCB1-206ENST00000477836 SECTM1Q8WVN6 248 aa7.48□□□□□ -1.21
SMARCB1-206ENST00000477836 EDARADDQ8WWZ3 215 aa7.48□□□□□ -1.21
SMARCB1-206ENST00000477836 OR5B12Q96R08 314 aa7.48□□□□□ -1.21
SMARCB1-206ENST00000477836 LINC00574Q9H8X3 128 aa7.48□□□□□ -1.21
SMARCB1-206ENST00000477836 GPN1Q9HCN4 374 aaPredicted RBP7.48□□□□□ -1.21
SMARCB1-206ENST00000477836 GFOD1Q9NXC2 390 aa7.48□□□□□ -1.21
SMARCB1-206ENST00000477836 RBM7Q9Y580 266 aaKnown RBP7.48□□□□□ -1.21
SMARCB1-206ENST00000477836 DNAH11Q96DT5 4516 aa7.48□□□□□ -1.21
SMARCB1-206ENST00000477836 DNAH17Q9UFH2 4485 aa7.47□□□□□ -1.21
SMARCB1-206ENST00000477836 A0A0B4J293 547 aa7.47□□□□□ -1.21
SMARCB1-206ENST00000477836 IGKV1D-13A0A0B4J2D9 117 aa7.47□□□□□ -1.21
SMARCB1-206ENST00000477836 A0A1B0GVG6 124 aa7.47□□□□□ -1.21
SMARCB1-206ENST00000477836 FAM90A9PA6NNJ1 464 aa7.47□□□□□ -1.21
SMARCB1-206ENST00000477836 BUB1B-PAK6H3BSN5 160 aa7.47□□□□□ -1.21
SMARCB1-206ENST00000477836 I3L521 148 aa7.47□□□□□ -1.21
SMARCB1-206ENST00000477836 BRI3O95415 125 aa7.47□□□□□ -1.21
SMARCB1-206ENST00000477836 CTSDP07339 412 aaPredicted RBP7.47□□□□□ -1.21
SMARCB1-206ENST00000477836 CGB3P0DN86 165 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms