RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 OPN1MW3P0DN78 364 aa13.89□□□□□ -0.19
PTPN7-209ENST00000477554 TRIM16LQ309B1 348 aa13.89□□□□□ -0.19
PTPN7-209ENST00000477554 SLC35E3Q7Z769 313 aa13.89□□□□□ -0.19
PTPN7-209ENST00000477554 CMTM1Q8IZ96 169 aa13.89□□□□□ -0.19
PTPN7-209ENST00000477554 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.89□□□□□ -0.19
PTPN7-209ENST00000477554 ZBTB34Q8NCN2 500 aa13.89□□□□□ -0.19
PTPN7-209ENST00000477554 C20orf85Q9H1P6 137 aa13.89□□□□□ -0.19
PTPN7-209ENST00000477554 NUDT15Q9NV35 164 aa13.89□□□□□ -0.19
PTPN7-209ENST00000477554 PSMB11A5LHX3 300 aa13.88□□□□□ -0.19
PTPN7-209ENST00000477554 GPR31O00270 319 aa13.88□□□□□ -0.19
PTPN7-209ENST00000477554 TXNL1O43396 289 aa13.88□□□□□ -0.19
PTPN7-209ENST00000477554 CTSDP07339 412 aaPredicted RBP13.88□□□□□ -0.19
PTPN7-209ENST00000477554 GNRHRP30968 328 aa13.88□□□□□ -0.19
PTPN7-209ENST00000477554 OXA1LQ15070 435 aa13.88□□□□□ -0.19
PTPN7-209ENST00000477554 STPG2Q8N412 459 aa13.88□□□□□ -0.19
PTPN7-209ENST00000477554 BVESQ8NE79 360 aa13.88□□□□□ -0.19
PTPN7-209ENST00000477554 CHPT1Q8WUD6 406 aa13.88□□□□□ -0.19
PTPN7-209ENST00000477554 VSIG4Q9Y279 399 aa13.88□□□□□ -0.19
PTPN7-209ENST00000477554 PRB2P02812 416 aaPredicted RBP13.87□□□□□ -0.19
PTPN7-209ENST00000477554 RLN1P04808 185 aa13.87□□□□□ -0.19
PTPN7-209ENST00000477554 H2AFB2P0C5Z0 115 aa13.87□□□□□ -0.19
PTPN7-209ENST00000477554 MMDQ15546 238 aa13.87□□□□□ -0.19
PTPN7-209ENST00000477554 KHDC1LQ5JSQ8 128 aa13.87□□□□□ -0.19
PTPN7-209ENST00000477554 ZNF818PQ6ZRF7 136 aa13.87□□□□□ -0.19
PTPN7-209ENST00000477554 CENPSQ8N2Z9 138 aa13.87□□□□□ -0.19
PTPN7-209ENST00000477554 CCL28Q9NRJ3 127 aa13.87□□□□□ -0.19
PTPN7-209ENST00000477554 LIN7CQ9NUP9 197 aaKnown RBP13.87□□□□□ -0.19
PTPN7-209ENST00000477554 TRAV6A0A075B6T7 132 aa13.86□□□□□ -0.19
PTPN7-209ENST00000477554 H0YJW9 148 aa13.86□□□□□ -0.19
PTPN7-209ENST00000477554 ARPC1BO15143 372 aaKnown RBP13.86□□□□□ -0.19
PTPN7-209ENST00000477554 TAS2R31P59538 309 aa13.86□□□□□ -0.19
PTPN7-209ENST00000477554 RND3P61587 244 aa13.86□□□□□ -0.19
PTPN7-209ENST00000477554 NDPQ00604 133 aa13.86□□□□□ -0.19
PTPN7-209ENST00000477554 OXLD1Q5BKU9 147 aa13.86□□□□□ -0.19
PTPN7-209ENST00000477554 FAM71F2Q6NXP2 309 aa13.86□□□□□ -0.19
PTPN7-209ENST00000477554 CCDC71LQ8N9Z2 235 aa13.86□□□□□ -0.19
PTPN7-209ENST00000477554 ZNF383Q8NA42 475 aa13.86□□□□□ -0.19
PTPN7-209ENST00000477554 RTBDNQ9BSG5 229 aaPredicted RBP13.86□□□□□ -0.19
PTPN7-209ENST00000477554 MARVELD1Q9BSK0 173 aa13.86□□□□□ -0.19
PTPN7-209ENST00000477554 C5orf66Q9H5L9 145 aa13.86□□□□□ -0.19
PTPN7-209ENST00000477554 NOTCH3Q9UM47 2321 aa13.85□□□□□ -0.19
PTPN7-209ENST00000477554 IGLV2-14P01704 120 aa13.85□□□□□ -0.19
PTPN7-209ENST00000477554 IGKV1-16P04430 117 aa13.85□□□□□ -0.19
PTPN7-209ENST00000477554 SPNP16150 400 aa13.85□□□□□ -0.19
PTPN7-209ENST00000477554 PIGPP57054 158 aa13.85□□□□□ -0.19
PTPN7-209ENST00000477554 UBE2MP61081 183 aaKnown RBP13.85□□□□□ -0.19
PTPN7-209ENST00000477554 ETV3LQ6ZN32 361 aa13.85□□□□□ -0.19
PTPN7-209ENST00000477554 TMED4Q7Z7H5 227 aa13.85□□□□□ -0.19
PTPN7-209ENST00000477554 DUX3Q96PT4 197 aa13.85□□□□□ -0.19
PTPN7-209ENST00000477554 RASL11BQ9BPW5 248 aa13.85□□□□□ -0.19
PTPN7-209ENST00000477554 SLC2A9Q9NRM0 540 aa13.85□□□□□ -0.19
PTPN7-209ENST00000477554 SDHAF2Q9NX18 166 aa13.85□□□□□ -0.19
PTPN7-209ENST00000477554 FLVCR2Q9UPI3 526 aa13.85□□□□□ -0.19
PTPN7-209ENST00000477554 FBXO7Q9Y3I1 522 aa13.85□□□□□ -0.19
PTPN7-209ENST00000477554 INMT-MINDY4F8WBC2 141 aa13.84□□□□□ -0.19
PTPN7-209ENST00000477554 G3V318 75 aa13.84□□□□□ -0.19
PTPN7-209ENST00000477554 FCN1O00602 326 aa13.84□□□□□ -0.19
PTPN7-209ENST00000477554 PI3P19957 117 aa13.84□□□□□ -0.19
PTPN7-209ENST00000477554 MECP2P51608 486 aaKnown RBP13.84□□□□□ -0.19
PTPN7-209ENST00000477554 CFHR3Q02985 330 aa13.84□□□□□ -0.19
PTPN7-209ENST00000477554 PHLDA2Q53GA4 152 aa13.84□□□□□ -0.19
PTPN7-209ENST00000477554 TMEM128Q5BJH2 165 aa13.84□□□□□ -0.19
PTPN7-209ENST00000477554 SLC25A42Q86VD7 318 aa13.84□□□□□ -0.19
PTPN7-209ENST00000477554 OR4X2Q8NGF9 303 aa13.84□□□□□ -0.19
PTPN7-209ENST00000477554 HSD17B10Q99714 261 aaKnown RBP13.84□□□□□ -0.19
PTPN7-209ENST00000477554 ALX4Q9H161 411 aaPredicted RBP13.84□□□□□ -0.19
PTPN7-209ENST00000477554 FBXL15Q9H469 300 aa13.84□□□□□ -0.19
PTPN7-209ENST00000477554 TPSG1Q9NRR2 321 aa13.84□□□□□ -0.19
PTPN7-209ENST00000477554 TSSC4Q9Y5U2 329 aaPredicted RBP13.84□□□□□ -0.19
PTPN7-209ENST00000477554 IGHV7-81A0A0B4J1V7 117 aa13.83□□□□□ -0.2
PTPN7-209ENST00000477554 NBR2O15453 112 aa13.83□□□□□ -0.2
PTPN7-209ENST00000477554 DHFRP00374 187 aa13.83□□□□□ -0.2
PTPN7-209ENST00000477554 RPLP1P05386 114 aaKnown RBP13.83□□□□□ -0.2
PTPN7-209ENST00000477554 SAMD5Q5TGI4 173 aa13.83□□□□□ -0.2
PTPN7-209ENST00000477554 ZNF66Q6ZN08 573 aa13.83□□□□□ -0.2
PTPN7-209ENST00000477554 WSB1Q9Y6I7 421 aa13.83□□□□□ -0.2
PTPN7-209ENST00000477554 TEX13DA0A0J9YY54 714 aaPredicted RBP13.82□□□□□ -0.2
PTPN7-209ENST00000477554 MPPED1O15442 326 aa13.82□□□□□ -0.2
PTPN7-209ENST00000477554 PGLYRP1O75594 196 aaPredicted RBP13.82□□□□□ -0.2
PTPN7-209ENST00000477554 AKR1C4P17516 323 aa13.82□□□□□ -0.2
PTPN7-209ENST00000477554 CATR1Q13166 79 aa13.82□□□□□ -0.2
PTPN7-209ENST00000477554 C5orf64Q2M2E5 130 aa13.82□□□□□ -0.2
PTPN7-209ENST00000477554 BEAN1Q3B7T3 259 aa13.82□□□□□ -0.2
PTPN7-209ENST00000477554 C8orf86Q6ZUL3 223 aa13.82□□□□□ -0.2
PTPN7-209ENST00000477554 SGPP2Q8IWX5 399 aa13.82□□□□□ -0.2
PTPN7-209ENST00000477554 ADAD2Q8NCV1 583 aaKnown RBP13.82□□□□□ -0.2
PTPN7-209ENST00000477554 NPBQ8NG41 125 aa13.82□□□□□ -0.2
PTPN7-209ENST00000477554 OR5AN1Q8NGI8 311 aa13.82□□□□□ -0.2
PTPN7-209ENST00000477554 ADTRPQ96IZ2 230 aa13.82□□□□□ -0.2
PTPN7-209ENST00000477554 KCNIP3Q9Y2W7 256 aa13.82□□□□□ -0.2
PTPN7-209ENST00000477554 CRYM-AS1A6NIL9 109 aa13.81□□□□□ -0.2
PTPN7-209ENST00000477554 M0R1X1 148 aa13.81□□□□□ -0.2
PTPN7-209ENST00000477554 ATP6V0E1O15342 81 aa13.81□□□□□ -0.2
PTPN7-209ENST00000477554 TNFSF12O43508 249 aa13.81□□□□□ -0.2
PTPN7-209ENST00000477554 PRAF2O60831 178 aa13.81□□□□□ -0.2
PTPN7-209ENST00000477554 B3GALNT1O75752 331 aa13.81□□□□□ -0.2
PTPN7-209ENST00000477554 NDUFA3O95167 84 aa13.81□□□□□ -0.2
PTPN7-209ENST00000477554 IGLL1P15814 213 aa13.81□□□□□ -0.2
PTPN7-209ENST00000477554 ANXA7P20073 488 aaKnown RBP13.81□□□□□ -0.2
PTPN7-209ENST00000477554 RPL23AP62750 156 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms