RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 RANBP3Q9H6Z4 567 aaPredicted RBP12.19□□□□□ -0.46
SEC13-215ENST00000477547 FLVCR2Q9UPI3 526 aa12.19□□□□□ -0.46
SEC13-215ENST00000477547 SH2D7A6NKC9 451 aaPredicted RBP12.18□□□□□ -0.46
SEC13-215ENST00000477547 RRHO14718 337 aa12.18□□□□□ -0.46
SEC13-215ENST00000477547 HPRT1P00492 218 aa12.18□□□□□ -0.46
SEC13-215ENST00000477547 IGLV2-23P01705 113 aa12.18□□□□□ -0.46
SEC13-215ENST00000477547 TCRBP04435 133 aa12.18□□□□□ -0.46
SEC13-215ENST00000477547 SERPINE2P07093 398 aa12.18□□□□□ -0.46
SEC13-215ENST00000477547 SAA1P0DJI8 122 aaPredicted RBP12.18□□□□□ -0.46
SEC13-215ENST00000477547 VAMP1P23763 118 aa12.18□□□□□ -0.46
SEC13-215ENST00000477547 LGALS7P47929 136 aa12.18□□□□□ -0.46
SEC13-215ENST00000477547 PSG5Q15238 335 aa12.18□□□□□ -0.46
SEC13-215ENST00000477547 C5orf64Q2M2E5 130 aa12.18□□□□□ -0.46
SEC13-215ENST00000477547 TRIM16LQ309B1 348 aa12.18□□□□□ -0.46
SEC13-215ENST00000477547 VMA21Q3ZAQ7 101 aa12.18□□□□□ -0.46
SEC13-215ENST00000477547 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.18□□□□□ -0.46
SEC13-215ENST00000477547 NPBQ8NG41 125 aa12.18□□□□□ -0.46
SEC13-215ENST00000477547 RASL11BQ9BPW5 248 aa12.18□□□□□ -0.46
SEC13-215ENST00000477547 FBXL15Q9H469 300 aa12.18□□□□□ -0.46
SEC13-215ENST00000477547 PLEKHA2Q9HB19 425 aa12.18□□□□□ -0.46
SEC13-215ENST00000477547 TPSG1Q9NRR2 321 aa12.18□□□□□ -0.46
SEC13-215ENST00000477547 PLSCR3Q9NRY6 295 aa12.18□□□□□ -0.46
SEC13-215ENST00000477547 FAM212BQ9NTI7 297 aaPredicted RBP12.18□□□□□ -0.46
SEC13-215ENST00000477547 METTL1Q9UBP6 276 aaKnown RBP12.18□□□□□ -0.46
SEC13-215ENST00000477547 TNCP24821 2201 aa12.18□□□□□ -0.46
SEC13-215ENST00000477547 TRAV6A0A075B6T7 132 aa12.17□□□□□ -0.46
SEC13-215ENST00000477547 B3GALNT1O75752 331 aa12.17□□□□□ -0.46
SEC13-215ENST00000477547 HRASP01112 189 aa12.17□□□□□ -0.46
SEC13-215ENST00000477547 AMY1AP04745 511 aa12.17□□□□□ -0.46
SEC13-215ENST00000477547 UCP1P25874 307 aa12.17□□□□□ -0.46
SEC13-215ENST00000477547 LPAR6P43657 344 aa12.17□□□□□ -0.46
SEC13-215ENST00000477547 ERVK-16P61578 105 aa12.17□□□□□ -0.46
SEC13-215ENST00000477547 SP6Q3SY56 376 aa12.17□□□□□ -0.46
SEC13-215ENST00000477547 ZNF585BQ52M93 769 aa12.17□□□□□ -0.46
SEC13-215ENST00000477547 C9orf152Q5JTZ5 239 aa12.17□□□□□ -0.46
SEC13-215ENST00000477547 C11orf88Q6PI97 169 aa12.17□□□□□ -0.46
SEC13-215ENST00000477547 NRARPQ7Z6K4 114 aa12.17□□□□□ -0.46
SEC13-215ENST00000477547 VKORC1L1Q8N0U8 176 aa12.17□□□□□ -0.46
SEC13-215ENST00000477547 TAF15Q92804 592 aaKnown RBP eCLIP12.17□□□□□ -0.46
SEC13-215ENST00000477547 R3HDM4Q96D70 268 aa12.17□□□□□ -0.46
SEC13-215ENST00000477547 TET2Q6N021 2002 aaPredicted RBP12.17□□□□□ -0.46
SEC13-215ENST00000477547 MARCH11A6NNE9 402 aa12.16□□□□□ -0.46
SEC13-215ENST00000477547 SRRM4A7MD48 611 aaKnown RBP12.16□□□□□ -0.46
SEC13-215ENST00000477547 ANXA3P12429 323 aa12.16□□□□□ -0.46
SEC13-215ENST00000477547 NQO2P16083 231 aa12.16□□□□□ -0.46
SEC13-215ENST00000477547 ANXA7P20073 488 aaKnown RBP12.16□□□□□ -0.46
SEC13-215ENST00000477547 RAG2P55895 527 aa12.16□□□□□ -0.46
SEC13-215ENST00000477547 UBE2MP61081 183 aaKnown RBP12.16□□□□□ -0.46
SEC13-215ENST00000477547 UBE2KP61086 200 aa12.16□□□□□ -0.46
SEC13-215ENST00000477547 SUPT4H1P63272 117 aaKnown RBP12.16□□□□□ -0.46
SEC13-215ENST00000477547 PPP1R1AQ13522 171 aa12.16□□□□□ -0.46
SEC13-215ENST00000477547 TMEM128Q5BJH2 165 aa12.16□□□□□ -0.46
SEC13-215ENST00000477547 ARSJQ5FYB0 599 aaPredicted RBP12.16□□□□□ -0.46
SEC13-215ENST00000477547 SSX9Q7RTT3 188 aa12.16□□□□□ -0.46
SEC13-215ENST00000477547 SLC25A42Q86VD7 318 aa12.16□□□□□ -0.46
SEC13-215ENST00000477547 GALNT14Q96FL9 552 aa12.16□□□□□ -0.46
SEC13-215ENST00000477547 RHOVQ96L33 236 aa12.16□□□□□ -0.46
SEC13-215ENST00000477547 PRSS22Q9GZN4 317 aa12.16□□□□□ -0.46
SEC13-215ENST00000477547 TMEM222Q9H0R3 208 aa12.16□□□□□ -0.46
SEC13-215ENST00000477547 ZNF702PQ9H963 129 aa12.16□□□□□ -0.46
SEC13-215ENST00000477547 NUBP2Q9Y5Y2 271 aa12.16□□□□□ -0.46
SEC13-215ENST00000477547 KBTBD11O94819 623 aa12.15□□□□□ -0.46
SEC13-215ENST00000477547 PTTG1O95997 202 aa12.15□□□□□ -0.46
SEC13-215ENST00000477547 HLA-AP01891 365 aaKnown RBP12.15□□□□□ -0.46
SEC13-215ENST00000477547 HLA-DRB1P01911 266 aa12.15□□□□□ -0.46
SEC13-215ENST00000477547 RPA2P15927 270 aa12.15□□□□□ -0.46
SEC13-215ENST00000477547 AKR1C2P52895 323 aa12.15□□□□□ -0.46
SEC13-215ENST00000477547 BLCAPP62952 87 aa12.15□□□□□ -0.46
SEC13-215ENST00000477547 RELBQ01201 579 aa12.15□□□□□ -0.46
SEC13-215ENST00000477547 DHODHQ02127 395 aa12.15□□□□□ -0.46
SEC13-215ENST00000477547 Q6ZSV7 163 aa12.15□□□□□ -0.46
SEC13-215ENST00000477547 DMBX1Q8NFW5 382 aa12.15□□□□□ -0.46
SEC13-215ENST00000477547 VSTM2AQ8TAG5 236 aa12.15□□□□□ -0.46
SEC13-215ENST00000477547 BEX1Q9HBH7 125 aa12.15□□□□□ -0.46
SEC13-215ENST00000477547 PRR13Q9NZ81 148 aa12.15□□□□□ -0.46
SEC13-215ENST00000477547 KCNIP3Q9Y2W7 256 aa12.15□□□□□ -0.46
SEC13-215ENST00000477547 SIGLEC9Q9Y336 463 aa12.15□□□□□ -0.46
SEC13-215ENST00000477547 CREBL2O60519 120 aaPredicted RBP12.14□□□□□ -0.47
SEC13-215ENST00000477547 NDUFA7O95182 113 aa12.14□□□□□ -0.47
SEC13-215ENST00000477547 KRASP01116 189 aa12.14□□□□□ -0.47
SEC13-215ENST00000477547 IGKV1-39P01597 117 aa12.14□□□□□ -0.47
SEC13-215ENST00000477547 IGKV1D-39P04432 117 aa12.14□□□□□ -0.47
SEC13-215ENST00000477547 H2AFB2P0C5Z0 115 aa12.14□□□□□ -0.47
SEC13-215ENST00000477547 G6PCP35575 357 aa12.14□□□□□ -0.47
SEC13-215ENST00000477547 RAB25P57735 213 aa12.14□□□□□ -0.47
SEC13-215ENST00000477547 POU2AF1Q16633 256 aa12.14□□□□□ -0.47
SEC13-215ENST00000477547 TMEM95Q3KNT9 176 aa12.14□□□□□ -0.47
SEC13-215ENST00000477547 C4orf46Q504U0 113 aa12.14□□□□□ -0.47
SEC13-215ENST00000477547 OR4A47Q6IF82 309 aa12.14□□□□□ -0.47
SEC13-215ENST00000477547 PLET1Q6UQ28 207 aa12.14□□□□□ -0.47
SEC13-215ENST00000477547 TEX45Q8NA69 505 aa12.14□□□□□ -0.47
SEC13-215ENST00000477547 OR2T6Q8NHC8 308 aa12.14□□□□□ -0.47
SEC13-215ENST00000477547 RNASE11Q8TAA1 199 aaKnown RBP12.14□□□□□ -0.47
SEC13-215ENST00000477547 LHFPL5Q8TAF8 219 aa12.14□□□□□ -0.47
SEC13-215ENST00000477547 CASTOR1Q8WTX7 329 aa12.14□□□□□ -0.47
SEC13-215ENST00000477547 CLCC1Q96S66 551 aa12.14□□□□□ -0.47
SEC13-215ENST00000477547 HSPB9Q9BQS6 159 aa12.14□□□□□ -0.47
SEC13-215ENST00000477547 AIFM2Q9BRQ8 373 aa12.14□□□□□ -0.47
SEC13-215ENST00000477547 TMEM140Q9NV12 185 aa12.14□□□□□ -0.47
SEC13-215ENST00000477547 OR2A4O95047 310 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms