RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 CADM3Q8N126 398 aa9.71□□□□□ -0.86
CLCNKA-205ENST00000477360 C11orf44Q8N8P7 122 aa9.71□□□□□ -0.86
CLCNKA-205ENST00000477360 TEX45Q8NA69 505 aa9.71□□□□□ -0.86
CLCNKA-205ENST00000477360 MYOZ3Q8TDC0 251 aa9.71□□□□□ -0.86
CLCNKA-205ENST00000477360 NOL4LQ96MY1 436 aaPredicted RBP9.71□□□□□ -0.86
CLCNKA-205ENST00000477360 TINAGL1Q9GZM7 467 aaPredicted RBP9.71□□□□□ -0.86
CLCNKA-205ENST00000477360 TRAV41A0A0B4J266 112 aa9.7□□□□□ -0.86
CLCNKA-205ENST00000477360 IGKV1D-13A0A0B4J2D9 117 aa9.7□□□□□ -0.86
CLCNKA-205ENST00000477360 LINC01548A6NM66 108 aa9.7□□□□□ -0.86
CLCNKA-205ENST00000477360 DISC1C4P0D8 188 aa9.7□□□□□ -0.86
CLCNKA-205ENST00000477360 M0QYG6 137 aa9.7□□□□□ -0.86
CLCNKA-205ENST00000477360 IGLV2-23P01705 113 aa9.7□□□□□ -0.86
CLCNKA-205ENST00000477360 IFNA6P05013 189 aa9.7□□□□□ -0.86
CLCNKA-205ENST00000477360 IGKV1-13P0DP09 117 aa9.7□□□□□ -0.86
CLCNKA-205ENST00000477360 AADACP22760 399 aa9.7□□□□□ -0.86
CLCNKA-205ENST00000477360 CNTFRP26992 372 aa9.7□□□□□ -0.86
CLCNKA-205ENST00000477360 ECI1P42126 302 aa9.7□□□□□ -0.86
CLCNKA-205ENST00000477360 TSPAN5P62079 268 aa9.7□□□□□ -0.86
CLCNKA-205ENST00000477360 PLGLAQ15195 96 aa9.7□□□□□ -0.86
CLCNKA-205ENST00000477360 VMA21Q3ZAQ7 101 aa9.7□□□□□ -0.86
CLCNKA-205ENST00000477360 AADACL3Q5VUY0 350 aa9.7□□□□□ -0.86
CLCNKA-205ENST00000477360 LPCAT3Q6P1A2 487 aa9.7□□□□□ -0.86
CLCNKA-205ENST00000477360 KCTD9Q7L273 389 aa9.7□□□□□ -0.86
CLCNKA-205ENST00000477360 OR4D10Q8NGI6 311 aa9.7□□□□□ -0.86
CLCNKA-205ENST00000477360 OR5M8Q8NGP6 311 aa9.7□□□□□ -0.86
CLCNKA-205ENST00000477360 OR4S2Q8NH73 311 aa9.7□□□□□ -0.86
CLCNKA-205ENST00000477360 TERB2Q8NHR7 220 aa9.7□□□□□ -0.86
CLCNKA-205ENST00000477360 VSTM2AQ8TAG5 236 aa9.7□□□□□ -0.86
CLCNKA-205ENST00000477360 CD300LFQ8TDQ1 290 aa9.7□□□□□ -0.86
CLCNKA-205ENST00000477360 R3HDM4Q96D70 268 aa9.7□□□□□ -0.86
CLCNKA-205ENST00000477360 C5orf30Q96GV9 206 aa9.7□□□□□ -0.86
CLCNKA-205ENST00000477360 UBE2E2Q96LR5 201 aa9.7□□□□□ -0.86
CLCNKA-205ENST00000477360 HARBI1Q96MB7 349 aa9.7□□□□□ -0.86
CLCNKA-205ENST00000477360 TSC22D3Q99576 134 aa9.7□□□□□ -0.86
CLCNKA-205ENST00000477360 PRRT1Q99946 306 aa9.7□□□□□ -0.86
CLCNKA-205ENST00000477360 ZNF2Q9BSG1 426 aaPredicted RBP9.7□□□□□ -0.86
CLCNKA-205ENST00000477360 FBXL15Q9H469 300 aa9.7□□□□□ -0.86
CLCNKA-205ENST00000477360 HRASLSQ9HDD0 168 aa9.7□□□□□ -0.86
CLCNKA-205ENST00000477360 METTL1Q9UBP6 276 aaKnown RBP9.7□□□□□ -0.86
CLCNKA-205ENST00000477360 NUBP2Q9Y5Y2 271 aa9.7□□□□□ -0.86
CLCNKA-205ENST00000477360 LINC00473A8K010 186 aa9.69□□□□□ -0.86
CLCNKA-205ENST00000477360 J3QRK9 145 aa9.69□□□□□ -0.86
CLCNKA-205ENST00000477360 SHOXO15266 292 aa9.69□□□□□ -0.86
CLCNKA-205ENST00000477360 UPK1BO75841 260 aa9.69□□□□□ -0.86
CLCNKA-205ENST00000477360 DUS4LO95620 317 aaKnown RBP9.69□□□□□ -0.86
CLCNKA-205ENST00000477360 PF4V1P10720 104 aa9.69□□□□□ -0.86
CLCNKA-205ENST00000477360 NOTCH1P46531 2555 aa9.69□□□□□ -0.86
CLCNKA-205ENST00000477360 INPP1P49441 399 aa9.69□□□□□ -0.86
CLCNKA-205ENST00000477360 HERV-K104P61576 105 aa9.69□□□□□ -0.86
CLCNKA-205ENST00000477360 CATR1Q13166 79 aa9.69□□□□□ -0.86
CLCNKA-205ENST00000477360 SURF2Q15527 256 aaPredicted RBP9.69□□□□□ -0.86
CLCNKA-205ENST00000477360 NSUN5P1Q3KNT7 163 aa9.69□□□□□ -0.86
CLCNKA-205ENST00000477360 ZNF57Q68EA5 555 aaPredicted RBP9.69□□□□□ -0.86
CLCNKA-205ENST00000477360 ZNF329Q86UD4 541 aa9.69□□□□□ -0.86
CLCNKA-205ENST00000477360 BVESQ8NE79 360 aa9.69□□□□□ -0.86
CLCNKA-205ENST00000477360 ZNF486Q96H40 463 aaPredicted RBP9.69□□□□□ -0.86
CLCNKA-205ENST00000477360 FXYD6Q9H0Q3 95 aa9.69□□□□□ -0.86
CLCNKA-205ENST00000477360 FAM212BQ9NTI7 297 aaPredicted RBP9.69□□□□□ -0.86
CLCNKA-205ENST00000477360 SCP2D1Q9UJQ7 156 aa9.69□□□□□ -0.86
CLCNKA-205ENST00000477360 H3BUA1 57 aa9.68□□□□□ -0.86
CLCNKA-205ENST00000477360 ATP6V0E1O15342 81 aa9.68□□□□□ -0.86
CLCNKA-205ENST00000477360 SLC25A17O43808 307 aa9.68□□□□□ -0.86
CLCNKA-205ENST00000477360 HRASP01112 189 aa9.68□□□□□ -0.86
CLCNKA-205ENST00000477360 MYCNOSP40205 109 aa9.68□□□□□ -0.86
CLCNKA-205ENST00000477360 RUNX1Q01196 453 aa9.68□□□□□ -0.86
CLCNKA-205ENST00000477360 C10orf99Q6UWK7 81 aa9.68□□□□□ -0.86
CLCNKA-205ENST00000477360 ZNF695Q8IW36 515 aa9.68□□□□□ -0.86
CLCNKA-205ENST00000477360 CMTM1Q8IZ96 169 aa9.68□□□□□ -0.86
CLCNKA-205ENST00000477360 FAM110DQ8TAY7 271 aaPredicted RBP9.68□□□□□ -0.86
CLCNKA-205ENST00000477360 RSRP1Q9BUV0 290 aa9.68□□□□□ -0.86
CLCNKA-205ENST00000477360 GPR61Q9BZJ8 451 aa9.68□□□□□ -0.86
CLCNKA-205ENST00000477360 SLC5A7Q9GZV3 580 aa9.68□□□□□ -0.86
CLCNKA-205ENST00000477360 SLA2Q9H6Q3 261 aa9.68□□□□□ -0.86
CLCNKA-205ENST00000477360 PARP11Q9NR21 331 aa9.68□□□□□ -0.86
CLCNKA-205ENST00000477360 FOXA2Q9Y261 457 aaPredicted RBP9.68□□□□□ -0.86
CLCNKA-205ENST00000477360 CENPXA8MT69 81 aa9.67□□□□□ -0.86
CLCNKA-205ENST00000477360 FCN1O00602 326 aa9.67□□□□□ -0.86
CLCNKA-205ENST00000477360 ARPC1BO15143 372 aaKnown RBP9.67□□□□□ -0.86
CLCNKA-205ENST00000477360 PLA2G10O15496 165 aa9.67□□□□□ -0.86
CLCNKA-205ENST00000477360 CRYZL1O95825 349 aa9.67□□□□□ -0.86
CLCNKA-205ENST00000477360 S100GP29377 79 aa9.67□□□□□ -0.86
CLCNKA-205ENST00000477360 GNRHRP30968 328 aa9.67□□□□□ -0.86
CLCNKA-205ENST00000477360 MAS1LP35410 378 aa9.67□□□□□ -0.86
CLCNKA-205ENST00000477360 LINC00205P59089 165 aa9.67□□□□□ -0.86
CLCNKA-205ENST00000477360 NDPQ00604 133 aa9.67□□□□□ -0.86
CLCNKA-205ENST00000477360 ASAH1Q13510 395 aa9.67□□□□□ -0.86
CLCNKA-205ENST00000477360 POU2AF1Q16633 256 aa9.67□□□□□ -0.86
CLCNKA-205ENST00000477360 KPRPQ5T749 579 aaPredicted RBP9.67□□□□□ -0.86
CLCNKA-205ENST00000477360 FAAP20Q6NZ36 180 aa9.67□□□□□ -0.86
CLCNKA-205ENST00000477360 TMEM65Q6PI78 240 aa9.67□□□□□ -0.86
CLCNKA-205ENST00000477360 MMD2Q8IY49 270 aa9.67□□□□□ -0.86
CLCNKA-205ENST00000477360 OR51S1Q8NGJ8 323 aa9.67□□□□□ -0.86
CLCNKA-205ENST00000477360 OR13C8Q8NGS7 320 aa9.67□□□□□ -0.86
CLCNKA-205ENST00000477360 SECTM1Q8WVN6 248 aa9.67□□□□□ -0.86
CLCNKA-205ENST00000477360 C4orf3Q8WVX3 66 aa9.67□□□□□ -0.86
CLCNKA-205ENST00000477360 ARPC1AQ92747 370 aa9.67□□□□□ -0.86
CLCNKA-205ENST00000477360 MRGPRFQ96AM1 343 aa9.67□□□□□ -0.86
CLCNKA-205ENST00000477360 RCC1LQ96I51 464 aaKnown RBP9.67□□□□□ -0.86
CLCNKA-205ENST00000477360 SLC25A21Q9BQT8 299 aaPredicted RBP9.67□□□□□ -0.86
CLCNKA-205ENST00000477360 PALMDQ9NP74 551 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms