RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 GCN1Q92616 2671 aaKnown RBP11.68□□□□□ -0.54
COL4A6-206ENST00000477085 A0A096LNT2 108 aa11.68□□□□□ -0.54
COL4A6-206ENST00000477085 IGHV3-72A0A0B4J1Y9 119 aa11.68□□□□□ -0.54
COL4A6-206ENST00000477085 A0A1W2PRD5 423 aa11.68□□□□□ -0.54
COL4A6-206ENST00000477085 A0A1W2PRF3 423 aa11.68□□□□□ -0.54
COL4A6-206ENST00000477085 A0A1W2PRM7 423 aa11.68□□□□□ -0.54
COL4A6-206ENST00000477085 FAM24AA6NFZ4 105 aa11.68□□□□□ -0.54
COL4A6-206ENST00000477085 BCL2L11O43521 198 aa11.68□□□□□ -0.54
COL4A6-206ENST00000477085 ARG1P05089 322 aa11.68□□□□□ -0.54
COL4A6-206ENST00000477085 PAX6P26367 422 aa11.68□□□□□ -0.54
COL4A6-206ENST00000477085 P2RY1P47900 373 aa11.68□□□□□ -0.54
COL4A6-206ENST00000477085 DVL1P1P54792 670 aaPredicted RBP11.68□□□□□ -0.54
COL4A6-206ENST00000477085 OR2B8PP59922 312 aa11.68□□□□□ -0.54
COL4A6-206ENST00000477085 RELBQ01201 579 aa11.68□□□□□ -0.54
COL4A6-206ENST00000477085 POU2AF1Q16633 256 aa11.68□□□□□ -0.54
COL4A6-206ENST00000477085 OR4A47Q6IF82 309 aa11.68□□□□□ -0.54
COL4A6-206ENST00000477085 LHFPL4Q7Z7J7 247 aa11.68□□□□□ -0.54
COL4A6-206ENST00000477085 OR8H1Q8NGG4 311 aa11.68□□□□□ -0.54
COL4A6-206ENST00000477085 RHOVQ96L33 236 aa11.68□□□□□ -0.54
COL4A6-206ENST00000477085 QTRT1Q9BXR0 403 aaKnown RBP11.68□□□□□ -0.54
COL4A6-206ENST00000477085 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.68□□□□□ -0.54
COL4A6-206ENST00000477085 HSPB7Q9UBY9 170 aa11.68□□□□□ -0.54
COL4A6-206ENST00000477085 ABCA12Q86UK0 2595 aa11.68□□□□□ -0.54
COL4A6-206ENST00000477085 ABCA2Q9BZC7 2435 aa11.67□□□□□ -0.54
COL4A6-206ENST00000477085 IGSF23A1L1A6 192 aa11.67□□□□□ -0.54
COL4A6-206ENST00000477085 IL3RAP26951 378 aa11.67□□□□□ -0.54
COL4A6-206ENST00000477085 NHLH2Q02577 135 aa11.67□□□□□ -0.54
COL4A6-206ENST00000477085 TNFRSF9Q07011 255 aa11.67□□□□□ -0.54
COL4A6-206ENST00000477085 RTL8BQ17RB0 113 aa11.67□□□□□ -0.54
COL4A6-206ENST00000477085 AARDQ4LEZ3 155 aa11.67□□□□□ -0.54
COL4A6-206ENST00000477085 ZNF680Q8NEM1 530 aa11.67□□□□□ -0.54
COL4A6-206ENST00000477085 C17orf50Q8WW18 174 aa11.67□□□□□ -0.54
COL4A6-206ENST00000477085 PCGF1Q9BSM1 259 aa11.67□□□□□ -0.54
COL4A6-206ENST00000477085 RBKSQ9H477 322 aa11.67□□□□□ -0.54
COL4A6-206ENST00000477085 DOPEY2Q9Y3R5 2298 aa11.67□□□□□ -0.54
COL4A6-206ENST00000477085 IGHV1-3A0A0C4DH29 117 aa11.67□□□□□ -0.54
COL4A6-206ENST00000477085 H7C2Y5 167 aa11.67□□□□□ -0.54
COL4A6-206ENST00000477085 WRBO00258 174 aa11.67□□□□□ -0.54
COL4A6-206ENST00000477085 SYNGR2O43760 224 aa11.67□□□□□ -0.54
COL4A6-206ENST00000477085 TOX4O94842 621 aa11.67□□□□□ -0.54
COL4A6-206ENST00000477085 IAPPP10997 89 aa11.67□□□□□ -0.54
COL4A6-206ENST00000477085 DSCR9P59020 149 aa11.67□□□□□ -0.54
COL4A6-206ENST00000477085 UBE2KP61086 200 aa11.67□□□□□ -0.54
COL4A6-206ENST00000477085 TAGLNQ01995 201 aaKnown RBP11.67□□□□□ -0.54
COL4A6-206ENST00000477085 DEFB113Q30KQ7 82 aa11.67□□□□□ -0.54
COL4A6-206ENST00000477085 TMEM177Q53S58 311 aa11.67□□□□□ -0.54
COL4A6-206ENST00000477085 DHRS7BQ6IAN0 325 aaPredicted RBP11.67□□□□□ -0.54
COL4A6-206ENST00000477085 OR2C3Q8N628 320 aa11.67□□□□□ -0.54
COL4A6-206ENST00000477085 LHX4Q969G2 390 aa11.67□□□□□ -0.54
COL4A6-206ENST00000477085 ZDHHC16Q969W1 377 aa11.67□□□□□ -0.54
COL4A6-206ENST00000477085 INSIG2Q9Y5U4 225 aa11.67□□□□□ -0.54
COL4A6-206ENST00000477085 A0A1W2PPI3 338 aa11.66□□□□□ -0.54
COL4A6-206ENST00000477085 FAM90A9PA6NNJ1 464 aa11.66□□□□□ -0.54
COL4A6-206ENST00000477085 GPR137BO60478 399 aa11.66□□□□□ -0.54
COL4A6-206ENST00000477085 GAPDHP04406 335 aaKnown RBP11.66□□□□□ -0.54
COL4A6-206ENST00000477085 MYOD1P15172 320 aa11.66□□□□□ -0.54
COL4A6-206ENST00000477085 PAX8Q06710 450 aa11.66□□□□□ -0.54
COL4A6-206ENST00000477085 SPINK9Q5DT21 86 aa11.66□□□□□ -0.54
COL4A6-206ENST00000477085 TPTE2P1Q5T6R2 138 aa11.66□□□□□ -0.54
COL4A6-206ENST00000477085 DYNAPQ8N1N2 210 aa11.66□□□□□ -0.54
COL4A6-206ENST00000477085 TMEM252Q8N6L7 170 aa11.66□□□□□ -0.54
COL4A6-206ENST00000477085 ARPC5LQ9BPX5 153 aa11.66□□□□□ -0.54
COL4A6-206ENST00000477085 WFDC1Q9HC57 220 aa11.66□□□□□ -0.54
COL4A6-206ENST00000477085 LYRM2Q9NU23 88 aaPredicted RBP11.66□□□□□ -0.54
COL4A6-206ENST00000477085 KANTRA0A1W2PQU2 76 aa11.65□□□□□ -0.54
COL4A6-206ENST00000477085 FAM90A26D6RGX4 464 aa11.65□□□□□ -0.54
COL4A6-206ENST00000477085 H3BP45 60 aa11.65□□□□□ -0.54
COL4A6-206ENST00000477085 IGLV2-23P01705 113 aa11.65□□□□□ -0.54
COL4A6-206ENST00000477085 APOA2P02652 100 aa11.65□□□□□ -0.54
COL4A6-206ENST00000477085 RRASP10301 218 aa11.65□□□□□ -0.54
COL4A6-206ENST00000477085 C4BPBP20851 252 aa11.65□□□□□ -0.54
COL4A6-206ENST00000477085 HTR1DP28221 377 aa11.65□□□□□ -0.54
COL4A6-206ENST00000477085 NUP62P37198 522 aaPredicted RBP11.65□□□□□ -0.54
COL4A6-206ENST00000477085 HTR2BP41595 481 aa11.65□□□□□ -0.54
COL4A6-206ENST00000477085 ERVK-16P61578 105 aa11.65□□□□□ -0.54
COL4A6-206ENST00000477085 EWSR1Q01844 656 aaKnown RBP eCLIP11.65□□□□□ -0.54
COL4A6-206ENST00000477085 EXOSC2Q13868 293 aaKnown RBP11.65□□□□□ -0.54
COL4A6-206ENST00000477085 GPR157Q5UAW9 335 aa11.65□□□□□ -0.54
COL4A6-206ENST00000477085 SLC51BQ86UW2 128 aa11.65□□□□□ -0.54
COL4A6-206ENST00000477085 PDPNQ86YL7 162 aa11.65□□□□□ -0.54
COL4A6-206ENST00000477085 FLYWCH2Q96CP2 140 aaKnown RBP11.65□□□□□ -0.54
COL4A6-206ENST00000477085 AJUBAQ96IF1 538 aa11.65□□□□□ -0.54
COL4A6-206ENST00000477085 BEX4Q9NWD9 120 aaPredicted RBP11.65□□□□□ -0.54
COL4A6-206ENST00000477085 DPM3Q9P2X0 92 aa11.65□□□□□ -0.54
COL4A6-206ENST00000477085 WASHC3Q9Y3C0 194 aa11.65□□□□□ -0.54
COL4A6-206ENST00000477085 AMMECR1Q9Y4X0 333 aaPredicted RBP11.65□□□□□ -0.54
COL4A6-206ENST00000477085 SHOXO15266 292 aa11.64□□□□□ -0.55
COL4A6-206ENST00000477085 SPDEFO95238 335 aa11.64□□□□□ -0.55
COL4A6-206ENST00000477085 HRASP01112 189 aa11.64□□□□□ -0.55
COL4A6-206ENST00000477085 SAA1P0DJI8 122 aaPredicted RBP11.64□□□□□ -0.55
COL4A6-206ENST00000477085 S100A1P23297 94 aa11.64□□□□□ -0.55
COL4A6-206ENST00000477085 CAV2P51636 162 aa11.64□□□□□ -0.55
COL4A6-206ENST00000477085 FBLN7Q53RD9 439 aa11.64□□□□□ -0.55
COL4A6-206ENST00000477085 MOB3BQ86TA1 216 aa11.64□□□□□ -0.55
COL4A6-206ENST00000477085 PUSL1Q8N0Z8 303 aaKnown RBP11.64□□□□□ -0.55
COL4A6-206ENST00000477085 OR4C13Q8NGP0 309 aa11.64□□□□□ -0.55
COL4A6-206ENST00000477085 OSR1Q8TAX0 266 aaPredicted RBP11.64□□□□□ -0.55
COL4A6-206ENST00000477085 RPEQ96AT9 228 aa11.64□□□□□ -0.55
COL4A6-206ENST00000477085 SMIM8Q96KF7 97 aa11.64□□□□□ -0.55
COL4A6-206ENST00000477085 RAB40CQ96S21 281 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms