RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 MCRIP2Q9BUT9 160 aaKnown RBP3.5□□□□□ -1.85
CD55-208ENST00000476590 FOXQ1Q9C009 403 aa3.5□□□□□ -1.85
CD55-208ENST00000476590 MS4A6AQ9H2W1 248 aa3.5□□□□□ -1.85
CD55-208ENST00000476590 GNB4Q9HAV0 340 aa3.5□□□□□ -1.85
CD55-208ENST00000476590 HES4Q9HCC6 221 aa3.5□□□□□ -1.85
CD55-208ENST00000476590 C1RLQ9NZP8 487 aa3.5□□□□□ -1.85
CD55-208ENST00000476590 SOX21Q9Y651 276 aaPredicted RBP3.5□□□□□ -1.85
CD55-208ENST00000476590 DENND4CQ5VZ89 1909 aa3.5□□□□□ -1.85
CD55-208ENST00000476590 A0A087X0K7 114 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 TRBV5-7A0A0A0MS05 114 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 LOC102725191A0A1B0GVB3 256 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 RIIAD1A6NNX1 92 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 PHF1O43189 567 aaPredicted RBP3.49□□□□□ -1.85
CD55-208ENST00000476590 ZNF737O75373 536 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 ETHE1O95571 254 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 ORM1P02763 201 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 CT45A6P0DMU7 189 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 CT45A5P0DMU8 189 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 CT45A7P0DMV0 189 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 HIST1H1CP16403 213 aaKnown RBP3.49□□□□□ -1.85
CD55-208ENST00000476590 ALOX5APP20292 161 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 NDUFV3P56181 108 aaKnown RBP3.49□□□□□ -1.85
CD55-208ENST00000476590 UBE2G1P62253 170 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 EWSR1Q01844 656 aaKnown RBP eCLIP3.49□□□□□ -1.85
CD55-208ENST00000476590 TNP2Q05952 138 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 MFGE8Q08431 387 aaPredicted RBP3.49□□□□□ -1.85
CD55-208ENST00000476590 PSG7Q13046 419 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 FOXE3Q13461 319 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 KIR3DS1Q14943 382 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 ZNF77Q15935 545 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 Q56UQ5 140 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 CT45A1Q5HYN5 189 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 UTF1Q5T230 341 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 LCN12Q6JVE5 192 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 HAPLN4Q86UW8 402 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 BPIFA4PQ86YQ2 179 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 FBXL14Q8N1E6 418 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 BCORP1Q8N888 145 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 SYT8Q8NBV8 401 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 OR4A16Q8NH70 328 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 CT45A3Q8NHU0 189 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 OSR1Q8TAX0 266 aaPredicted RBP3.49□□□□□ -1.85
CD55-208ENST00000476590 ZNF502Q8TBZ5 544 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 SSC4DQ8WTU2 575 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 MBD3L1Q8WWY6 194 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 SOCS4Q8WXH5 440 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 WFDC6Q9BQY6 131 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 TMEM204Q9BSN7 226 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 MAP1LC3AQ9H492 121 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 SCRT2Q9NQ03 307 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 PRR13Q9NZ81 148 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 TFCP2L1Q9NZI6 479 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 KCNS2Q9ULS6 477 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 SELENOKQ9Y6D0 94 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 NUP98P52948 1817 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 ZNF831Q5JPB2 1677 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 OR4C46A6NHA9 309 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 J3KT08 172 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 RHODO00212 210 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 CDC42EP2O14613 210 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 RS1O15537 224 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 APOA2P02652 100 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 MT-ND6P03923 174 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 HPNP05981 417 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 CELA2AP08217 269 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 OR9G9P0C7N8 305 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 SRD5A1P18405 259 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 PPIFP30405 207 aaKnown RBP3.49□□□□□ -1.85
CD55-208ENST00000476590 XGP55808 180 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 CXCL9Q07325 125 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 MFAP5Q13361 173 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 LY6DQ14210 128 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 ZNF74Q16587 644 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 MEIG1Q5JSS6 88 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 FAM166AQ6J272 317 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 ZNF841Q6ZN19 808 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 RFLNAQ6ZTI6 216 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.49□□□□□ -1.85
CD55-208ENST00000476590 ADGRE4PQ86SQ3 457 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 RFLNBQ8N5W9 214 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 TPRX1Q8N7U7 411 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 OR1L3Q8NH93 324 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 ATP6V0E2Q8NHE4 81 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 GLYATL1Q969I3 302 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 LSM10Q969L4 123 aaKnown RBP3.49□□□□□ -1.85
CD55-208ENST00000476590 MSI2Q96DH6 328 aaKnown RBP3.49□□□□□ -1.85
CD55-208ENST00000476590 SNRNP40Q96DI7 357 aaKnown RBP3.49□□□□□ -1.85
CD55-208ENST00000476590 Q96M66 194 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 OR4C12Q96R67 309 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 RAB40CQ96S21 281 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 C20orf78Q9BR46 151 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 TTTY10Q9BZA0 68 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 ZNF665Q9H7R5 613 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 BCL2L10Q9HD36 194 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 DUSP13Q9UII6 198 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 ARL2-SNX15V9GYD0 113 aa3.49□□□□□ -1.85
CD55-208ENST00000476590 SSC5DA1L4H1 1573 aa3.48□□□□□ -1.85
CD55-208ENST00000476590 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.48□□□□□ -1.85
CD55-208ENST00000476590 A0A0G2JLL6 359 aaPredicted RBP3.48□□□□□ -1.85
CD55-208ENST00000476590 A0A1W2PP11 408 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms