RNA–Protein interactions for RNA: ENST00000475445.1

GGA1-218, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 2,614 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-218	ENST00000475445	MRPL41	Q8IXM3	137 aa	Known RBP	12.03	□□□□□ -0.48
GGA1-218	ENST00000475445	OR10G4	Q8NGN3	311 aa		12.03	□□□□□ -0.48
GGA1-218	ENST00000475445	OR1P1	Q8NH06	330 aa		12.03	□□□□□ -0.48
GGA1-218	ENST00000475445	NINJ1	Q92982	152 aa		12.03	□□□□□ -0.48
GGA1-218	ENST00000475445	OR2D2	Q9H210	308 aa		12.03	□□□□□ -0.48
GGA1-218	ENST00000475445	GCH1	P30793	250 aa		12.02	□□□□□ -0.49
GGA1-218	ENST00000475445	TAGLN2	P37802	199 aa	Known RBP	12.02	□□□□□ -0.49
GGA1-218	ENST00000475445	UBE2K	P61086	200 aa		12.02	□□□□□ -0.49
GGA1-218	ENST00000475445	HAPLN4	Q86UW8	402 aa		12.02	□□□□□ -0.49
GGA1-218	ENST00000475445	C1orf87	Q8N0U7	546 aa		12.02	□□□□□ -0.49
GGA1-218	ENST00000475445	COQ2	Q96H96	371 aa		12.02	□□□□□ -0.49
GGA1-218	ENST00000475445	MIEN1	Q9BRT3	115 aa		12.02	□□□□□ -0.49
GGA1-218	ENST00000475445	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	12.02	□□□□□ -0.49
GGA1-218	ENST00000475445	PTPRB	P23467	1997 aa		12.02	□□□□□ -0.49
GGA1-218	ENST00000475445	HPRT1	P00492	218 aa		12.02	□□□□□ -0.49
GGA1-218	ENST00000475445		P0C879	139 aa		12.02	□□□□□ -0.49
GGA1-218	ENST00000475445	CCKAR	P32238	428 aa		12.02	□□□□□ -0.49
GGA1-218	ENST00000475445	RPL19	P84098	196 aa	Known RBP	12.02	□□□□□ -0.49
GGA1-218	ENST00000475445	AES	Q08117	197 aa		12.02	□□□□□ -0.49
GGA1-218	ENST00000475445	ARL16	Q0P5N6	197 aa		12.02	□□□□□ -0.49
GGA1-218	ENST00000475445	C4orf17	Q53FE4	359 aa		12.02	□□□□□ -0.49
GGA1-218	ENST00000475445	TRAT1	Q6PIZ9	186 aa		12.02	□□□□□ -0.49
GGA1-218	ENST00000475445	IGF2-AS	Q6U949	168 aa		12.02	□□□□□ -0.49
GGA1-218	ENST00000475445		Q6ZR03	302 aa		12.02	□□□□□ -0.49
GGA1-218	ENST00000475445	CXorf67	Q86X51	503 aa	Predicted RBP	12.02	□□□□□ -0.49
GGA1-218	ENST00000475445	FAM169B	Q8N8A8	192 aa		12.02	□□□□□ -0.49
GGA1-218	ENST00000475445	OR2D3	Q8NGH3	330 aa		12.02	□□□□□ -0.49
GGA1-218	ENST00000475445	MBD3L1	Q8WWY6	194 aa		12.02	□□□□□ -0.49
GGA1-218	ENST00000475445	HSPB7	Q9UBY9	170 aa		12.02	□□□□□ -0.49
GGA1-218	ENST00000475445	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	12.02	□□□□□ -0.49
GGA1-218	ENST00000475445	URGCP-MRPS24	S4R325	110 aa		12.02	□□□□□ -0.49
GGA1-218	ENST00000475445	KIAA2026	Q5HYC2	2103 aa		12.02	□□□□□ -0.49
GGA1-218	ENST00000475445	LOC102723971	A0A1B0GUV8	181 aa		12.01	□□□□□ -0.49
GGA1-218	ENST00000475445		H3BQ15	152 aa		12.01	□□□□□ -0.49
GGA1-218	ENST00000475445	NBEAP1	P0C6P0	100 aa		12.01	□□□□□ -0.49
GGA1-218	ENST00000475445	P2RY6	Q15077	328 aa		12.01	□□□□□ -0.49
GGA1-218	ENST00000475445	PRAMEF6	Q5VXH4	476 aa		12.01	□□□□□ -0.49
GGA1-218	ENST00000475445	RSG1	Q9BU20	258 aa		12.01	□□□□□ -0.49
GGA1-218	ENST00000475445	WISP2	O76076	250 aa		12.01	□□□□□ -0.49
GGA1-218	ENST00000475445	WT1	P19544	449 aa	Predicted RBP	12.01	□□□□□ -0.49
GGA1-218	ENST00000475445	GABRA2	P47869	451 aa		12.01	□□□□□ -0.49
GGA1-218	ENST00000475445	TMEM14EP	Q6UXP3	125 aa		12.01	□□□□□ -0.49
GGA1-218	ENST00000475445	OR52L2P	Q8NGH6	319 aa		12.01	□□□□□ -0.49
GGA1-218	ENST00000475445	PINX1	Q96BK5	328 aa	Known RBP	12.01	□□□□□ -0.49
GGA1-218	ENST00000475445	SLC35E1	Q96K37	410 aa		12.01	□□□□□ -0.49
GGA1-218	ENST00000475445	RPRM	Q9NS64	109 aa		12.01	□□□□□ -0.49
GGA1-218	ENST00000475445	PROCR	Q9UNN8	238 aa		12.01	□□□□□ -0.49
GGA1-218	ENST00000475445	LOC105371242	A0A075B767	164 aa		12	□□□□□ -0.49
GGA1-218	ENST00000475445	IGHV2OR16-5	A0A0B4J2B6	119 aa		12	□□□□□ -0.49
GGA1-218	ENST00000475445	PPP5D1	E7EU14	171 aa		12	□□□□□ -0.49
GGA1-218	ENST00000475445	TFPI2	P48307	235 aa		12	□□□□□ -0.49
GGA1-218	ENST00000475445	FOXF2	Q12947	444 aa		12	□□□□□ -0.49
GGA1-218	ENST00000475445	BATF	Q16520	125 aa		12	□□□□□ -0.49
GGA1-218	ENST00000475445	SPANXN5	Q5MJ07	72 aa		12	□□□□□ -0.49
GGA1-218	ENST00000475445	TMEM18	Q96B42	140 aa		12	□□□□□ -0.49
GGA1-218	ENST00000475445	WDR61	Q9GZS3	305 aa	Known RBP	12	□□□□□ -0.49
GGA1-218	ENST00000475445	RBKS	Q9H477	322 aa		12	□□□□□ -0.49
GGA1-218	ENST00000475445	ZNF430	Q9H8G1	570 aa	Predicted RBP	12	□□□□□ -0.49
GGA1-218	ENST00000475445	ZNF71	Q9NQZ8	489 aa	Predicted RBP	12	□□□□□ -0.49
GGA1-218	ENST00000475445	LAMP3	Q9UQV4	416 aa		12	□□□□□ -0.49
GGA1-218	ENST00000475445	TIMM9	Q9Y5J7	89 aa		12	□□□□□ -0.49
GGA1-218	ENST00000475445	IGHV1-18	A0A0C4DH31	117 aa		12	□□□□□ -0.49
GGA1-218	ENST00000475445	GLIPR1	P48060	266 aa		12	□□□□□ -0.49
GGA1-218	ENST00000475445	ZNF66	Q6ZN08	573 aa		12	□□□□□ -0.49
GGA1-218	ENST00000475445	ZNF429	Q86V71	674 aa		12	□□□□□ -0.49
GGA1-218	ENST00000475445	GBGT1	Q8N5D6	347 aa		12	□□□□□ -0.49
GGA1-218	ENST00000475445	CYB561D1	Q8N8Q1	229 aa		12	□□□□□ -0.49
GGA1-218	ENST00000475445	C5orf30	Q96GV9	206 aa		12	□□□□□ -0.49
GGA1-218	ENST00000475445	TAAR6	Q96RI8	345 aa		12	□□□□□ -0.49
GGA1-218	ENST00000475445	CEACAM4	O75871	244 aa		11.99	□□□□□ -0.49
GGA1-218	ENST00000475445	TNFSF13	O75888	250 aa		11.99	□□□□□ -0.49
GGA1-218	ENST00000475445	OR10J1	P30954	320 aa		11.99	□□□□□ -0.49
GGA1-218	ENST00000475445	FABP6	P51161	128 aa		11.99	□□□□□ -0.49
GGA1-218	ENST00000475445	RPL30	P62888	115 aa	Known RBP	11.99	□□□□□ -0.49
GGA1-218	ENST00000475445	COL10A1	Q03692	680 aa		11.99	□□□□□ -0.49
GGA1-218	ENST00000475445	SLC38A11	Q08AI6	406 aa		11.99	□□□□□ -0.49
GGA1-218	ENST00000475445	ZNF787	Q6DD87	383 aa		11.99	□□□□□ -0.49
GGA1-218	ENST00000475445	BHLHA15	Q7RTS1	189 aa	Predicted RBP	11.99	□□□□□ -0.49
GGA1-218	ENST00000475445	LINC01551	Q86U37	167 aa		11.99	□□□□□ -0.49
GGA1-218	ENST00000475445	TVP23C	Q96ET8	276 aa		11.99	□□□□□ -0.49
GGA1-218	ENST00000475445	C20orf144	Q9BQM9	153 aa		11.99	□□□□□ -0.49
GGA1-218	ENST00000475445	NIPSNAP3B	Q9BS92	247 aa		11.99	□□□□□ -0.49
GGA1-218	ENST00000475445	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	11.99	□□□□□ -0.49
GGA1-218	ENST00000475445	CISD1	Q9NZ45	108 aa	Known RBP	11.99	□□□□□ -0.49
GGA1-218	ENST00000475445	GTF3C1	Q12789	2109 aa		11.99	□□□□□ -0.49
GGA1-218	ENST00000475445	RAB29	O14966	203 aa		11.99	□□□□□ -0.49
GGA1-218	ENST00000475445	RAMP3	O60896	148 aa		11.99	□□□□□ -0.49
GGA1-218	ENST00000475445	CLDN14	O95500	239 aa		11.99	□□□□□ -0.49
GGA1-218	ENST00000475445	CGA	P01215	116 aa		11.99	□□□□□ -0.49
GGA1-218	ENST00000475445	TMEM41B	Q5BJD5	291 aa		11.99	□□□□□ -0.49
GGA1-218	ENST00000475445	FAM216A	Q8WUB2	273 aa		11.99	□□□□□ -0.49
GGA1-218	ENST00000475445	STARD4	Q96DR4	205 aa		11.99	□□□□□ -0.49
GGA1-218	ENST00000475445	OR4C12	Q96R67	309 aa		11.99	□□□□□ -0.49
GGA1-218	ENST00000475445	LRRC30	A6NM36	301 aa		11.98	□□□□□ -0.49
GGA1-218	ENST00000475445	CLDN1	O95832	211 aa		11.98	□□□□□ -0.49
GGA1-218	ENST00000475445	HTD2	P86397	168 aa		11.98	□□□□□ -0.49
GGA1-218	ENST00000475445	ZNF808	Q8N4W9	903 aa	Predicted RBP	11.98	□□□□□ -0.49
GGA1-218	ENST00000475445	TAF15	Q92804	592 aa	Known RBP eCLIP	11.98	□□□□□ -0.49
GGA1-218	ENST00000475445	HSD17B10	Q99714	261 aa	Known RBP	11.98	□□□□□ -0.49
GGA1-218	ENST00000475445	DKK4	Q9UBT3	224 aa		11.98	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms