RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 STPG2Q8N412 459 aa9.39□□□□□ -0.91
VAPB-204ENST00000475243 PPP1R3EQ9H7J1 279 aa9.39□□□□□ -0.91
VAPB-204ENST00000475243 FAM206AQ9NX38 181 aa9.39□□□□□ -0.91
VAPB-204ENST00000475243 LCTP09848 1927 aa9.39□□□□□ -0.91
VAPB-204ENST00000475243 NPIPB6E9PJ23 425 aa9.39□□□□□ -0.91
VAPB-204ENST00000475243 FCARP24071 287 aa9.39□□□□□ -0.91
VAPB-204ENST00000475243 DLX6P56179 175 aa9.39□□□□□ -0.91
VAPB-204ENST00000475243 STPG3Q8N7X2 389 aa9.39□□□□□ -0.91
VAPB-204ENST00000475243 NPIPB8E9PQR5 432 aa9.39□□□□□ -0.91
VAPB-204ENST00000475243 ERGP11308 486 aa9.39□□□□□ -0.91
VAPB-204ENST00000475243 ANOS1P23352 680 aa9.39□□□□□ -0.91
VAPB-204ENST00000475243 DNLZQ5SXM8 178 aa9.39□□□□□ -0.91
VAPB-204ENST00000475243 FADS6Q8N9I5 356 aa9.39□□□□□ -0.91
VAPB-204ENST00000475243 OR4C13Q8NGP0 309 aa9.39□□□□□ -0.91
VAPB-204ENST00000475243 PF4P02776 101 aa9.38□□□□□ -0.91
VAPB-204ENST00000475243 AMY1AP04745 511 aa9.38□□□□□ -0.91
VAPB-204ENST00000475243 HKR1P10072 659 aa9.38□□□□□ -0.91
VAPB-204ENST00000475243 PRB3Q04118 309 aaPredicted RBP9.38□□□□□ -0.91
VAPB-204ENST00000475243 ZNF345Q14585 488 aa9.38□□□□□ -0.91
VAPB-204ENST00000475243 FAM106AQ4KMX7 169 aa9.38□□□□□ -0.91
VAPB-204ENST00000475243 FHL5Q5TD97 284 aa9.38□□□□□ -0.91
VAPB-204ENST00000475243 SIGLEC12Q96PQ1 595 aa9.38□□□□□ -0.91
VAPB-204ENST00000475243 ZNF430Q9H8G1 570 aaPredicted RBP9.38□□□□□ -0.91
VAPB-204ENST00000475243 MOB4Q9Y3A3 225 aa9.38□□□□□ -0.91
VAPB-204ENST00000475243 CRYBB3P26998 211 aa9.38□□□□□ -0.91
VAPB-204ENST00000475243 LCN2P80188 198 aa9.38□□□□□ -0.91
VAPB-204ENST00000475243 IFITM3Q01628 133 aa9.38□□□□□ -0.91
VAPB-204ENST00000475243 GTF3C1Q12789 2109 aa9.38□□□□□ -0.91
VAPB-204ENST00000475243 LOXL4Q96JB6 756 aa9.38□□□□□ -0.91
VAPB-204ENST00000475243 LRRK1Q38SD2 2015 aa9.38□□□□□ -0.91
VAPB-204ENST00000475243 PCSK4Q6UW60 755 aa9.38□□□□□ -0.91
VAPB-204ENST00000475243 LSM10Q969L4 123 aaKnown RBP9.38□□□□□ -0.91
VAPB-204ENST00000475243 KCNE5Q9UJ90 142 aa9.38□□□□□ -0.91
VAPB-204ENST00000475243 FSTP19883 344 aa9.38□□□□□ -0.91
VAPB-204ENST00000475243 RELQ04864 619 aaPredicted RBP9.38□□□□□ -0.91
VAPB-204ENST00000475243 TNFRSF9Q07011 255 aa9.38□□□□□ -0.91
VAPB-204ENST00000475243 ABLIM2Q6H8Q1 611 aa9.38□□□□□ -0.91
VAPB-204ENST00000475243 CACNA1BQ00975 2339 aa9.38□□□□□ -0.91
VAPB-204ENST00000475243 GDF9O60383 454 aa9.38□□□□□ -0.91
VAPB-204ENST00000475243 PCOLCEQ15113 449 aa9.38□□□□□ -0.91
VAPB-204ENST00000475243 WNT5BQ9H1J7 359 aa9.38□□□□□ -0.91
VAPB-204ENST00000475243 F11RQ9Y624 299 aaKnown RBP9.38□□□□□ -0.91
VAPB-204ENST00000475243 NYNRINQ9P2P1 1898 aaKnown RBP9.38□□□□□ -0.91
VAPB-204ENST00000475243 RFPL3SP0C7P2 107 aa9.38□□□□□ -0.91
VAPB-204ENST00000475243 ZNF56Q15929 161 aa9.38□□□□□ -0.91
VAPB-204ENST00000475243 SPATA45Q537H7 98 aa9.38□□□□□ -0.91
VAPB-204ENST00000475243 ZCCHC14Q8WYQ9 949 aaKnown RBP9.38□□□□□ -0.91
VAPB-204ENST00000475243 DOCK4Q8N1I0 1966 aa9.38□□□□□ -0.91
VAPB-204ENST00000475243 DSPPQ9NZW4 1301 aa9.38□□□□□ -0.91
VAPB-204ENST00000475243 KLF4O43474 513 aa9.37□□□□□ -0.91
VAPB-204ENST00000475243 STAG3L2P0CL84 134 aa9.37□□□□□ -0.91
VAPB-204ENST00000475243 PKIAP61925 76 aa9.37□□□□□ -0.91
VAPB-204ENST00000475243 MRPL18Q9H0U6 180 aaKnown RBP9.37□□□□□ -0.91
VAPB-204ENST00000475243 LNP1A1A4G5 178 aa9.37□□□□□ -0.91
VAPB-204ENST00000475243 TCF21O43680 179 aa9.37□□□□□ -0.91
VAPB-204ENST00000475243 PPP1R17O96001 155 aa9.37□□□□□ -0.91
VAPB-204ENST00000475243 DNASE2BQ8WZ79 361 aa9.37□□□□□ -0.91
VAPB-204ENST00000475243 SYNGR3O43761 229 aa9.37□□□□□ -0.91
VAPB-204ENST00000475243 MEF2BQ02080 365 aaPredicted RBP9.37□□□□□ -0.91
VAPB-204ENST00000475243 ZNF818PQ6ZRF7 136 aa9.37□□□□□ -0.91
VAPB-204ENST00000475243 AQP3Q92482 292 aa9.37□□□□□ -0.91
VAPB-204ENST00000475243 WFIKKN1Q96NZ8 548 aa9.37□□□□□ -0.91
VAPB-204ENST00000475243 COL4A5P29400 1685 aa9.37□□□□□ -0.91
VAPB-204ENST00000475243 MPDU1O75352 247 aa9.37□□□□□ -0.91
VAPB-204ENST00000475243 GCM2O75603 506 aaPredicted RBP9.37□□□□□ -0.91
VAPB-204ENST00000475243 GCGP01275 180 aa9.37□□□□□ -0.91
VAPB-204ENST00000475243 CELA3AP09093 270 aa9.37□□□□□ -0.91
VAPB-204ENST00000475243 PDLIM4P50479 330 aa9.37□□□□□ -0.91
VAPB-204ENST00000475243 SELENOTP62341 195 aa9.37□□□□□ -0.91
VAPB-204ENST00000475243 FAM27E3Q08E93 113 aa9.37□□□□□ -0.91
VAPB-204ENST00000475243 OR4A47Q6IF82 309 aa9.37□□□□□ -0.91
VAPB-204ENST00000475243 HIST1H4GQ99525 98 aa9.37□□□□□ -0.91
VAPB-204ENST00000475243 GPR132Q9UNW8 380 aa9.37□□□□□ -0.91
VAPB-204ENST00000475243 TRBV5-5A0A0J9YX44 114 aa9.37□□□□□ -0.91
VAPB-204ENST00000475243 MOSP00540 346 aa9.37□□□□□ -0.91
VAPB-204ENST00000475243 FAM201AQ5SY85 155 aa9.37□□□□□ -0.91
VAPB-204ENST00000475243 TIMP4Q99727 224 aa9.37□□□□□ -0.91
VAPB-204ENST00000475243 OR51M1Q9H341 326 aa9.37□□□□□ -0.91
VAPB-204ENST00000475243 LINC00862A6NCI5 91 aa9.37□□□□□ -0.91
VAPB-204ENST00000475243 LIPFP07098 398 aa9.37□□□□□ -0.91
VAPB-204ENST00000475243 C5orf66Q9H5L9 145 aa9.37□□□□□ -0.91
VAPB-204ENST00000475243 HINT1P49773 126 aaPredicted RBP9.37□□□□□ -0.91
VAPB-204ENST00000475243 RPL39P5Q59GN2 51 aa9.37□□□□□ -0.91
VAPB-204ENST00000475243 GOLT1AQ6ZVE7 132 aa9.37□□□□□ -0.91
VAPB-204ENST00000475243 ATOH7Q8N100 152 aa9.37□□□□□ -0.91
VAPB-204ENST00000475243 CLEC7AQ9BXN2 247 aa9.37□□□□□ -0.91
VAPB-204ENST00000475243 TUBD1Q9UJT1 453 aa9.37□□□□□ -0.91
VAPB-204ENST00000475243 C9JCJ5 164 aa9.36□□□□□ -0.91
VAPB-204ENST00000475243 SMAGPQ0VAQ4 97 aa9.36□□□□□ -0.91
VAPB-204ENST00000475243 OR51G1Q8NGK1 321 aa9.36□□□□□ -0.91
VAPB-204ENST00000475243 MAP1LC3AQ9H492 121 aa9.36□□□□□ -0.91
VAPB-204ENST00000475243 TGIF2-C20orf24A0A0A6YYL0 155 aa9.36□□□□□ -0.91
VAPB-204ENST00000475243 C7orf71A4D174 169 aa9.36□□□□□ -0.91
VAPB-204ENST00000475243 H0YL77 283 aa9.36□□□□□ -0.91
VAPB-204ENST00000475243 NDUFA2O43678 99 aa9.36□□□□□ -0.91
VAPB-204ENST00000475243 NPIPB3Q92617 1050 aa9.36□□□□□ -0.91
VAPB-204ENST00000475243 HSPE1P61604 102 aaKnown RBP9.36□□□□□ -0.91
VAPB-204ENST00000475243 RALYQ9UKM9 306 aaKnown RBP9.36□□□□□ -0.91
VAPB-204ENST00000475243 FOXI3A8MTJ6 420 aaPredicted RBP9.36□□□□□ -0.91
VAPB-204ENST00000475243 RECKO95980 971 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms