RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 RTTNQ86VV8 2226 aa3.37□□□□□ -1.87
USP16-205ENST00000474835 TMEM265A0A087WTH1 108 aa3.37□□□□□ -1.87
USP16-205ENST00000474835 TRAV24A0A0B4J272 114 aa3.37□□□□□ -1.87
USP16-205ENST00000474835 PIGBOS1A0A0B4J2F0 54 aa3.37□□□□□ -1.87
USP16-205ENST00000474835 DPRXA6NFQ7 191 aa3.37□□□□□ -1.87
USP16-205ENST00000474835 PRR33A8MZF0 331 aa3.37□□□□□ -1.87
USP16-205ENST00000474835 B4DGG1 531 aa3.37□□□□□ -1.87
USP16-205ENST00000474835 C2CD4DB7Z1M9 353 aa3.37□□□□□ -1.87
USP16-205ENST00000474835 SSSCA1O60232 199 aa3.37□□□□□ -1.87
USP16-205ENST00000474835 VAMP5O95183 116 aa3.37□□□□□ -1.87
USP16-205ENST00000474835 HLA-HP01893 362 aa3.37□□□□□ -1.87
USP16-205ENST00000474835 BLVRBP30043 206 aaPredicted RBP3.37□□□□□ -1.87
USP16-205ENST00000474835 DNASE1L1P49184 302 aa3.37□□□□□ -1.87
USP16-205ENST00000474835 CCL11P51671 97 aa3.37□□□□□ -1.87
USP16-205ENST00000474835 CARD18P57730 90 aa3.37□□□□□ -1.87
USP16-205ENST00000474835 PPP1CBP62140 327 aa3.37□□□□□ -1.87
USP16-205ENST00000474835 DLX2Q07687 328 aaPredicted RBP3.37□□□□□ -1.87
USP16-205ENST00000474835 GPM6BQ13491 265 aa3.37□□□□□ -1.87
USP16-205ENST00000474835 POU2AF1Q16633 256 aa3.37□□□□□ -1.87
USP16-205ENST00000474835 OTPQ5XKR4 325 aa3.37□□□□□ -1.87
USP16-205ENST00000474835 CCDC71LQ8N9Z2 235 aa3.37□□□□□ -1.87
USP16-205ENST00000474835 C5orf17Q8NAS9 161 aa3.37□□□□□ -1.87
USP16-205ENST00000474835 MYOZ3Q8TDC0 251 aa3.37□□□□□ -1.87
USP16-205ENST00000474835 H1FXQ92522 213 aaKnown RBP3.37□□□□□ -1.87
USP16-205ENST00000474835 LIN37Q96GY3 246 aaPredicted RBP3.37□□□□□ -1.87
USP16-205ENST00000474835 MGST2Q99735 147 aa3.37□□□□□ -1.87
USP16-205ENST00000474835 SMIM7Q9BQ49 75 aa3.37□□□□□ -1.87
USP16-205ENST00000474835 FGF21Q9NSA1 209 aa3.37□□□□□ -1.87
USP16-205ENST00000474835 TP73-AS1Q9UF72 201 aa3.37□□□□□ -1.87
USP16-205ENST00000474835 GAGE12BA1L429 117 aa3.36□□□□□ -1.87
USP16-205ENST00000474835 OR2T8A6NH00 312 aa3.36□□□□□ -1.87
USP16-205ENST00000474835 SYNGR2O43760 224 aa3.36□□□□□ -1.87
USP16-205ENST00000474835 CGB3P0DN86 165 aa3.36□□□□□ -1.87
USP16-205ENST00000474835 CGB7P0DN87 165 aa3.36□□□□□ -1.87
USP16-205ENST00000474835 ATP5G3P48201 142 aa3.36□□□□□ -1.87
USP16-205ENST00000474835 PPOXP50336 477 aa3.36□□□□□ -1.87
USP16-205ENST00000474835 ASCL1P50553 236 aa3.36□□□□□ -1.87
USP16-205ENST00000474835 SLC16A1P53985 500 aa3.36□□□□□ -1.87
USP16-205ENST00000474835 PPP1CAP62136 330 aa3.36□□□□□ -1.87
USP16-205ENST00000474835 MRPS34P82930 218 aaKnown RBP3.36□□□□□ -1.87
USP16-205ENST00000474835 CCDC144NLQ6NUI1 221 aa3.36□□□□□ -1.87
USP16-205ENST00000474835 WDR82Q6UXN9 313 aa3.36□□□□□ -1.87
USP16-205ENST00000474835 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.36□□□□□ -1.87
USP16-205ENST00000474835 TMEFF1Q8IYR6 380 aa3.36□□□□□ -1.87
USP16-205ENST00000474835 VN1R17PQ8TDU5 208 aa3.36□□□□□ -1.87
USP16-205ENST00000474835 CHCHD1Q96BP2 118 aaKnown RBP3.36□□□□□ -1.87
USP16-205ENST00000474835 GAL3ST4Q96RP7 486 aa3.36□□□□□ -1.87
USP16-205ENST00000474835 NDFIP1Q9BT67 221 aa3.36□□□□□ -1.87
USP16-205ENST00000474835 QTRT1Q9BXR0 403 aaKnown RBP3.36□□□□□ -1.87
USP16-205ENST00000474835 OR1A1Q9P1Q5 309 aa3.36□□□□□ -1.87
USP16-205ENST00000474835 TACC2O95359 2948 aa3.36□□□□□ -1.87
USP16-205ENST00000474835 WI2-2373I1.2A0A1W2PRP0 233 aa3.36□□□□□ -1.87
USP16-205ENST00000474835 OR11H12B2RN74 326 aa3.36□□□□□ -1.87
USP16-205ENST00000474835 SHISA9B4DS77 424 aa3.36□□□□□ -1.87
USP16-205ENST00000474835 MPIG6BO95866 241 aa3.36□□□□□ -1.87
USP16-205ENST00000474835 APCSP02743 223 aa3.36□□□□□ -1.87
USP16-205ENST00000474835 STATHP02808 62 aa3.36□□□□□ -1.87
USP16-205ENST00000474835 CSN2P05814 226 aa3.36□□□□□ -1.87
USP16-205ENST00000474835 HNF1AP20823 631 aa3.36□□□□□ -1.87
USP16-205ENST00000474835 SQSTM1Q13501 440 aa3.36□□□□□ -1.87
USP16-205ENST00000474835 ZNF672Q499Z4 452 aaPredicted RBP3.36□□□□□ -1.87
USP16-205ENST00000474835 ZNF493Q6ZR52 646 aa3.36□□□□□ -1.87
USP16-205ENST00000474835 SFTPA2Q8IWL1 248 aa3.36□□□□□ -1.87
USP16-205ENST00000474835 UEVLDQ8IX04 471 aa3.36□□□□□ -1.87
USP16-205ENST00000474835 SIGLECL1Q8N7X8 197 aa3.36□□□□□ -1.87
USP16-205ENST00000474835 SMRP1Q8NCR6 262 aa3.36□□□□□ -1.87
USP16-205ENST00000474835 OR11H1Q8NG94 326 aa3.36□□□□□ -1.87
USP16-205ENST00000474835 OR10P1Q8NGE3 313 aa3.36□□□□□ -1.87
USP16-205ENST00000474835 OR11H2Q8NH07 326 aa3.36□□□□□ -1.87
USP16-205ENST00000474835 TMEM190Q8WZ59 177 aa3.36□□□□□ -1.87
USP16-205ENST00000474835 LRRC61Q9BV99 259 aa3.36□□□□□ -1.87
USP16-205ENST00000474835 OR2D2Q9H210 308 aa3.36□□□□□ -1.87
USP16-205ENST00000474835 ZNF286AQ9HBT8 521 aa3.36□□□□□ -1.87
USP16-205ENST00000474835 INSIG2Q9Y5U4 225 aa3.36□□□□□ -1.87
USP16-205ENST00000474835 A0A1W2PRU2 124 aa3.36□□□□□ -1.87
USP16-205ENST00000474835 LRP5LA4QPB2 252 aa3.36□□□□□ -1.87
USP16-205ENST00000474835 IZUMO1RA6ND01 250 aa3.36□□□□□ -1.87
USP16-205ENST00000474835 TMEM8BA6NDV4 472 aa3.36□□□□□ -1.87
USP16-205ENST00000474835 CD300LBA8K4G0 201 aa3.36□□□□□ -1.87
USP16-205ENST00000474835 METTL12A8MUP2 240 aa3.36□□□□□ -1.87
USP16-205ENST00000474835 DIRC3C9JPN6 131 aa3.36□□□□□ -1.87
USP16-205ENST00000474835 MPDU1O75352 247 aa3.36□□□□□ -1.87
USP16-205ENST00000474835 ADH1BP00325 375 aa3.36□□□□□ -1.87
USP16-205ENST00000474835 FAM87AP0C7U9 286 aa3.36□□□□□ -1.87
USP16-205ENST00000474835 ADH5P11766 374 aa3.36□□□□□ -1.87
USP16-205ENST00000474835 CD38P28907 300 aa3.36□□□□□ -1.87
USP16-205ENST00000474835 SEC11AP67812 179 aa3.36□□□□□ -1.87
USP16-205ENST00000474835 RPL19P84098 196 aaKnown RBP3.36□□□□□ -1.87
USP16-205ENST00000474835 TFF3Q07654 80 aa3.36□□□□□ -1.87
USP16-205ENST00000474835 GNMTQ14749 295 aa3.36□□□□□ -1.87
USP16-205ENST00000474835 CNN3Q15417 329 aaKnown RBP3.36□□□□□ -1.87
USP16-205ENST00000474835 PIGYQ3MUY2 71 aa3.36□□□□□ -1.87
USP16-205ENST00000474835 DNM1P34Q6PK57 102 aa3.36□□□□□ -1.87
USP16-205ENST00000474835 OR4A5Q8NH83 315 aa3.36□□□□□ -1.87
USP16-205ENST00000474835 ABHD3Q8WU67 409 aa3.36□□□□□ -1.87
USP16-205ENST00000474835 TMEM37Q8WXS4 190 aa3.36□□□□□ -1.87
USP16-205ENST00000474835 GUCD1Q96NT3 240 aa3.36□□□□□ -1.87
USP16-205ENST00000474835 FAM110AQ9BQ89 295 aa3.36□□□□□ -1.87
USP16-205ENST00000474835 GGTLC1Q9BX51 225 aa3.36□□□□□ -1.87
USP16-205ENST00000474835 TM2D2Q9BX73 214 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms