RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 TMUB1Q9BVT8 246 aa8.36□□□□□ -1.07
COL12A1-206ENST00000474564 FKBP11Q9NYL4 201 aa8.36□□□□□ -1.07
COL12A1-206ENST00000474564 MMP24Q9Y5R2 645 aa8.36□□□□□ -1.07
COL12A1-206ENST00000474564 IGHV3-72A0A0B4J1Y9 119 aa8.35□□□□□ -1.07
COL12A1-206ENST00000474564 A0A0U1RQK1 487 aa8.35□□□□□ -1.07
COL12A1-206ENST00000474564 A0A1B0GU03 582 aa8.35□□□□□ -1.07
COL12A1-206ENST00000474564 A0A1W2PPI3 338 aa8.35□□□□□ -1.07
COL12A1-206ENST00000474564 MARCH11A6NNE9 402 aa8.35□□□□□ -1.07
COL12A1-206ENST00000474564 NCBP2LA6PVI3 153 aaKnown RBP8.35□□□□□ -1.07
COL12A1-206ENST00000474564 L7N2F9 121 aa8.35□□□□□ -1.07
COL12A1-206ENST00000474564 PROP1O75360 226 aa8.35□□□□□ -1.07
COL12A1-206ENST00000474564 LY6G6DO95868 133 aa8.35□□□□□ -1.07
COL12A1-206ENST00000474564 AVPP01185 164 aa8.35□□□□□ -1.07
COL12A1-206ENST00000474564 IGKV1D-33P01593 117 aa8.35□□□□□ -1.07
COL12A1-206ENST00000474564 IGKV1-33P01594 117 aa8.35□□□□□ -1.07
COL12A1-206ENST00000474564 TMEM11P17152 192 aa8.35□□□□□ -1.07
COL12A1-206ENST00000474564 H2BFSP57053 126 aa8.35□□□□□ -1.07
COL12A1-206ENST00000474564 C2orf68Q2NKX9 166 aa8.35□□□□□ -1.07
COL12A1-206ENST00000474564 C9orf139Q6ZV77 190 aa8.35□□□□□ -1.07
COL12A1-206ENST00000474564 MRPL41Q8IXM3 137 aaKnown RBP8.35□□□□□ -1.07
COL12A1-206ENST00000474564 SELENOHQ8IZQ5 122 aaKnown RBP8.35□□□□□ -1.07
COL12A1-206ENST00000474564 SLC35G3Q8N808 338 aa8.35□□□□□ -1.07
COL12A1-206ENST00000474564 OR4A5Q8NH83 315 aa8.35□□□□□ -1.07
COL12A1-206ENST00000474564 OR1S1Q8NH92 325 aa8.35□□□□□ -1.07
COL12A1-206ENST00000474564 GRPEL2Q8TAA5 225 aa8.35□□□□□ -1.07
COL12A1-206ENST00000474564 DCUN1D4Q92564 292 aa8.35□□□□□ -1.07
COL12A1-206ENST00000474564 RHOVQ96L33 236 aa8.35□□□□□ -1.07
COL12A1-206ENST00000474564 SSX3Q99909 188 aa8.35□□□□□ -1.07
COL12A1-206ENST00000474564 NMES1Q9C002 83 aa8.35□□□□□ -1.07
COL12A1-206ENST00000474564 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.35□□□□□ -1.07
COL12A1-206ENST00000474564 LSM5Q9Y4Y9 91 aaKnown RBP8.35□□□□□ -1.07
COL12A1-206ENST00000474564 HSPB11Q9Y547 144 aa8.35□□□□□ -1.07
COL12A1-206ENST00000474564 PRRC2AP48634 2157 aaKnown RBP8.35□□□□□ -1.07
COL12A1-206ENST00000474564 FAM90A9PA6NNJ1 464 aa8.34□□□□□ -1.07
COL12A1-206ENST00000474564 M0QZK8 103 aa8.34□□□□□ -1.07
COL12A1-206ENST00000474564 ARPC5O15511 151 aa8.34□□□□□ -1.07
COL12A1-206ENST00000474564 RAMP3O60896 148 aa8.34□□□□□ -1.07
COL12A1-206ENST00000474564 OR2A4O95047 310 aa8.34□□□□□ -1.07
COL12A1-206ENST00000474564 S1PR2O95136 353 aa8.34□□□□□ -1.07
COL12A1-206ENST00000474564 VENTXO95231 258 aa8.34□□□□□ -1.07
COL12A1-206ENST00000474564 SPDEFO95238 335 aa8.34□□□□□ -1.07
COL12A1-206ENST00000474564 SNRNP70P08621 437 aaKnown RBP8.34□□□□□ -1.07
COL12A1-206ENST00000474564 SLC25A6P12236 298 aa8.34□□□□□ -1.07
COL12A1-206ENST00000474564 SRD5A1P18405 259 aa8.34□□□□□ -1.07
COL12A1-206ENST00000474564 PVALBP20472 110 aaPredicted RBP8.34□□□□□ -1.07
COL12A1-206ENST00000474564 G6PCP35575 357 aa8.34□□□□□ -1.07
COL12A1-206ENST00000474564 VAMP2P63027 116 aa8.34□□□□□ -1.07
COL12A1-206ENST00000474564 DIAPH2-AS1Q14236 149 aa8.34□□□□□ -1.07
COL12A1-206ENST00000474564 HABP2Q14520 560 aaPredicted RBP8.34□□□□□ -1.07
COL12A1-206ENST00000474564 HNF4GQ14541 408 aa8.34□□□□□ -1.07
COL12A1-206ENST00000474564 MMDQ15546 238 aa8.34□□□□□ -1.07
COL12A1-206ENST00000474564 ZNF585BQ52M93 769 aa8.34□□□□□ -1.07
COL12A1-206ENST00000474564 KLF17Q5JT82 389 aaPredicted RBP8.34□□□□□ -1.07
COL12A1-206ENST00000474564 LYZL2Q7Z4W2 148 aa8.34□□□□□ -1.07
COL12A1-206ENST00000474564 TEX45Q8NA69 505 aa8.34□□□□□ -1.07
COL12A1-206ENST00000474564 INO80EQ8NBZ0 244 aaPredicted RBP8.34□□□□□ -1.07
COL12A1-206ENST00000474564 ZNF418Q8TF45 676 aaPredicted RBP8.34□□□□□ -1.07
COL12A1-206ENST00000474564 PPP1R1CQ8WVI7 109 aa8.34□□□□□ -1.07
COL12A1-206ENST00000474564 C5orf30Q96GV9 206 aa8.34□□□□□ -1.07
COL12A1-206ENST00000474564 OR2A7Q96R45 310 aa8.34□□□□□ -1.07
COL12A1-206ENST00000474564 JMJD8Q96S16 334 aa8.34□□□□□ -1.07
COL12A1-206ENST00000474564 RASL11BQ9BPW5 248 aa8.34□□□□□ -1.07
COL12A1-206ENST00000474564 PRNDQ9UKY0 176 aa8.34□□□□□ -1.07
COL12A1-206ENST00000474564 DCHS2Q6V1P9 2916 aa8.33□□□□□ -1.08
COL12A1-206ENST00000474564 DBX1A6NMT0 343 aa8.33□□□□□ -1.08
COL12A1-206ENST00000474564 NBR2O15453 112 aa8.33□□□□□ -1.08
COL12A1-206ENST00000474564 MED6O75586 246 aa8.33□□□□□ -1.08
COL12A1-206ENST00000474564 LY86O95711 162 aa8.33□□□□□ -1.08
COL12A1-206ENST00000474564 HLA-GP17693 338 aa8.33□□□□□ -1.08
COL12A1-206ENST00000474564 PSMB6P28072 239 aa8.33□□□□□ -1.08
COL12A1-206ENST00000474564 MAS1LP35410 378 aa8.33□□□□□ -1.08
COL12A1-206ENST00000474564 AP2S1P53680 142 aaPredicted RBP8.33□□□□□ -1.08
COL12A1-206ENST00000474564 UBE2KP61086 200 aa8.33□□□□□ -1.08
COL12A1-206ENST00000474564 C11orf87Q6NUJ2 197 aa8.33□□□□□ -1.08
COL12A1-206ENST00000474564 C1orf229Q6ZS94 237 aaPredicted RBP8.33□□□□□ -1.08
COL12A1-206ENST00000474564 SSX9Q7RTT3 188 aa8.33□□□□□ -1.08
COL12A1-206ENST00000474564 C16orf82Q7Z2V1 217 aa8.33□□□□□ -1.08
COL12A1-206ENST00000474564 MMD2Q8IY49 270 aa8.33□□□□□ -1.08
COL12A1-206ENST00000474564 ZBTB8BQ8NAP8 495 aaPredicted RBP8.33□□□□□ -1.08
COL12A1-206ENST00000474564 SSMEM1Q8WWF3 244 aa8.33□□□□□ -1.08
COL12A1-206ENST00000474564 EAF1Q96JC9 268 aaPredicted RBP8.33□□□□□ -1.08
COL12A1-206ENST00000474564 COMMD5Q9GZQ3 224 aa8.33□□□□□ -1.08
COL12A1-206ENST00000474564 ENY2Q9NPA8 101 aa8.33□□□□□ -1.08
COL12A1-206ENST00000474564 KANTRA0A1W2PQU2 76 aa8.32□□□□□ -1.08
COL12A1-206ENST00000474564 CNIH1O95406 144 aa8.32□□□□□ -1.08
COL12A1-206ENST00000474564 FSHBP01225 129 aa8.32□□□□□ -1.08
COL12A1-206ENST00000474564 IGKV1-16P04430 117 aa8.32□□□□□ -1.08
COL12A1-206ENST00000474564 LINC00205P59089 165 aa8.32□□□□□ -1.08
COL12A1-206ENST00000474564 EBI3Q14213 229 aa8.32□□□□□ -1.08
COL12A1-206ENST00000474564 POU2AF1Q16633 256 aa8.32□□□□□ -1.08
COL12A1-206ENST00000474564 DEFB112Q30KQ8 113 aa8.32□□□□□ -1.08
COL12A1-206ENST00000474564 ZNF546Q86UE3 836 aa8.32□□□□□ -1.08
COL12A1-206ENST00000474564 C22orf15Q8WYQ4 148 aa8.32□□□□□ -1.08
COL12A1-206ENST00000474564 CFHR4Q92496 578 aa8.32□□□□□ -1.08
COL12A1-206ENST00000474564 WDR89Q96FK6 387 aaPredicted RBP8.32□□□□□ -1.08
COL12A1-206ENST00000474564 OR10C1Q96KK4 312 aa8.32□□□□□ -1.08
COL12A1-206ENST00000474564 MFFQ9GZY8 342 aa8.32□□□□□ -1.08
COL12A1-206ENST00000474564 TMEM140Q9NV12 185 aa8.32□□□□□ -1.08
COL12A1-206ENST00000474564 COA4Q9NYJ1 87 aa8.32□□□□□ -1.08
COL12A1-206ENST00000474564 BET1LQ9NYM9 111 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms