RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 CCDC74BQ96LY2 380 aa6.78□□□□□ -1.32
CCDC93-208ENST00000474546 QTRT1Q9BXR0 403 aaKnown RBP6.78□□□□□ -1.32
CCDC93-208ENST00000474546 OR2J1Q9GZK6 312 aa6.78□□□□□ -1.32
CCDC93-208ENST00000474546 SH2D2AQ9NP31 389 aa6.78□□□□□ -1.32
CCDC93-208ENST00000474546 ASCL3Q9NQ33 180 aa6.78□□□□□ -1.32
CCDC93-208ENST00000474546 TMEM167BQ9NRX6 74 aa6.78□□□□□ -1.32
CCDC93-208ENST00000474546 CBLN4Q9NTU7 201 aa6.78□□□□□ -1.32
CCDC93-208ENST00000474546 MBNL3Q9NUK0 354 aaKnown RBP6.78□□□□□ -1.32
CCDC93-208ENST00000474546 MRPL27Q9P0M9 148 aaKnown RBP6.78□□□□□ -1.32
CCDC93-208ENST00000474546 B4GALT7Q9UBV7 327 aa6.78□□□□□ -1.32
CCDC93-208ENST00000474546 TRAPPC2LQ9UL33 140 aa6.78□□□□□ -1.32
CCDC93-208ENST00000474546 KCNS2Q9ULS6 477 aa6.78□□□□□ -1.32
CCDC93-208ENST00000474546 WDR83OSQ9Y284 106 aa6.78□□□□□ -1.32
CCDC93-208ENST00000474546 TNRC6AQ8NDV7 1962 aaKnown RBP6.77□□□□□ -1.33
CCDC93-208ENST00000474546 A0A1W2PN81 502 aa6.77□□□□□ -1.33
CCDC93-208ENST00000474546 TMEM30CPA0ZSE6 113 aa6.77□□□□□ -1.33
CCDC93-208ENST00000474546 OOEPA6NGQ2 149 aa6.77□□□□□ -1.33
CCDC93-208ENST00000474546 ZNF716A6NP11 495 aa6.77□□□□□ -1.33
CCDC93-208ENST00000474546 SHISA8B8ZZ34 492 aa6.77□□□□□ -1.33
CCDC93-208ENST00000474546 H3BP45 60 aa6.77□□□□□ -1.33
CCDC93-208ENST00000474546 RBFOX2O43251 390 aaKnown RBP eCLIP6.77□□□□□ -1.33
CCDC93-208ENST00000474546 ZIC3O60481 467 aa6.77□□□□□ -1.33
CCDC93-208ENST00000474546 PAGE4O60829 102 aa6.77□□□□□ -1.33
CCDC93-208ENST00000474546 SS18L1O75177 396 aaPredicted RBP6.77□□□□□ -1.33
CCDC93-208ENST00000474546 ZNF253O75346 499 aa6.77□□□□□ -1.33
CCDC93-208ENST00000474546 MRPL33O75394 65 aaKnown RBP6.77□□□□□ -1.33
CCDC93-208ENST00000474546 IL6RP08887 468 aaPredicted RBP6.77□□□□□ -1.33
CCDC93-208ENST00000474546 SNRPCP09234 159 aaKnown RBP6.77□□□□□ -1.33
CCDC93-208ENST00000474546 IAPPP10997 89 aa6.77□□□□□ -1.33
CCDC93-208ENST00000474546 B4GALT1P15291 398 aa6.77□□□□□ -1.33
CCDC93-208ENST00000474546 GZMHP20718 246 aa6.77□□□□□ -1.33
CCDC93-208ENST00000474546 MDKP21741 143 aaPredicted RBP6.77□□□□□ -1.33
CCDC93-208ENST00000474546 TIMP3P35625 211 aa6.77□□□□□ -1.33
CCDC93-208ENST00000474546 CHRNA7P36544 502 aa6.77□□□□□ -1.33
CCDC93-208ENST00000474546 HTD2P86397 168 aa6.77□□□□□ -1.33
CCDC93-208ENST00000474546 TESK1Q15569 626 aa6.77□□□□□ -1.33
CCDC93-208ENST00000474546 ANKRD39Q53RE8 183 aa6.77□□□□□ -1.33
CCDC93-208ENST00000474546 PHYHD1Q5SRE7 291 aa6.77□□□□□ -1.33
CCDC93-208ENST00000474546 DCAF12Q5T6F0 453 aa6.77□□□□□ -1.33
CCDC93-208ENST00000474546 ZNF497Q6ZNH5 498 aa6.77□□□□□ -1.33
CCDC93-208ENST00000474546 CALHM1Q8IU99 346 aa6.77□□□□□ -1.33
CCDC93-208ENST00000474546 NECAP1Q8NC96 275 aa6.77□□□□□ -1.33
CCDC93-208ENST00000474546 OR56B2PQ8NGI1 322 aa6.77□□□□□ -1.33
CCDC93-208ENST00000474546 GALMQ96C23 342 aa6.77□□□□□ -1.33
CCDC93-208ENST00000474546 SLC25A22Q9H936 323 aa6.77□□□□□ -1.33
CCDC93-208ENST00000474546 PATZ1Q9HBE1 687 aaKnown RBP6.77□□□□□ -1.33
CCDC93-208ENST00000474546 LPAR2Q9HBW0 351 aa6.77□□□□□ -1.33
CCDC93-208ENST00000474546 MSL2Q9HCI7 577 aa6.77□□□□□ -1.33
CCDC93-208ENST00000474546 GP6Q9HCN6 339 aa6.77□□□□□ -1.33
CCDC93-208ENST00000474546 SLC35D1Q9NTN3 355 aa6.77□□□□□ -1.33
CCDC93-208ENST00000474546 BET1LQ9NYM9 111 aa6.77□□□□□ -1.33
CCDC93-208ENST00000474546 SLC25A10Q9UBX3 287 aaPredicted RBP6.77□□□□□ -1.33
CCDC93-208ENST00000474546 BOKQ9UMX3 212 aaPredicted RBP6.77□□□□□ -1.33
CCDC93-208ENST00000474546 TBL2Q9Y4P3 447 aaKnown RBP6.77□□□□□ -1.33
CCDC93-208ENST00000474546 RTTNQ86VV8 2226 aa6.76□□□□□ -1.33
CCDC93-208ENST00000474546 TRGV10A0A0A0MS01 117 aa6.76□□□□□ -1.33
CCDC93-208ENST00000474546 IGHV1-45A0A0A0MS14 117 aa6.76□□□□□ -1.33
CCDC93-208ENST00000474546 IGHV3-20A0A0C4DH32 117 aa6.76□□□□□ -1.33
CCDC93-208ENST00000474546 IGKV1-6A0A0C4DH72 117 aa6.76□□□□□ -1.33
CCDC93-208ENST00000474546 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.76□□□□□ -1.33
CCDC93-208ENST00000474546 A0A0J9YW62 118 aa6.76□□□□□ -1.33
CCDC93-208ENST00000474546 YPEL1O60688 119 aa6.76□□□□□ -1.33
CCDC93-208ENST00000474546 IGKV1-5P01602 117 aa6.76□□□□□ -1.33
CCDC93-208ENST00000474546 ADH4P08319 380 aa6.76□□□□□ -1.33
CCDC93-208ENST00000474546 OR4A8P0C604 315 aa6.76□□□□□ -1.33
CCDC93-208ENST00000474546 P0C879 139 aa6.76□□□□□ -1.33
CCDC93-208ENST00000474546 STAG3L2P0CL84 134 aa6.76□□□□□ -1.33
CCDC93-208ENST00000474546 STAG3L3P0CL85 134 aa6.76□□□□□ -1.33
CCDC93-208ENST00000474546 GCH1P30793 250 aa6.76□□□□□ -1.33
CCDC93-208ENST00000474546 GPM6AP51674 278 aa6.76□□□□□ -1.33
CCDC93-208ENST00000474546 MLF1P58340 268 aa6.76□□□□□ -1.33
CCDC93-208ENST00000474546 TAS2R45P59539 299 aa6.76□□□□□ -1.33
CCDC93-208ENST00000474546 ZNF146Q15072 292 aa6.76□□□□□ -1.33
CCDC93-208ENST00000474546 PCOLCEQ15113 449 aa6.76□□□□□ -1.33
CCDC93-208ENST00000474546 TMEM30BQ3MIR4 351 aa6.76□□□□□ -1.33
CCDC93-208ENST00000474546 MORN2Q502X0 79 aa6.76□□□□□ -1.33
CCDC93-208ENST00000474546 TPTE2P1Q5T6R2 138 aa6.76□□□□□ -1.33
CCDC93-208ENST00000474546 LEMD1Q68G75 181 aa6.76□□□□□ -1.33
CCDC93-208ENST00000474546 OR8G2PQ6IF36 304 aa6.76□□□□□ -1.33
CCDC93-208ENST00000474546 ZNF295-AS1Q8N0V1 137 aa6.76□□□□□ -1.33
CCDC93-208ENST00000474546 ZNF738Q8NE65 137 aa6.76□□□□□ -1.33
CCDC93-208ENST00000474546 DYRK2Q92630 601 aa6.76□□□□□ -1.33
CCDC93-208ENST00000474546 BORCS7Q96B45 105 aa6.76□□□□□ -1.33
CCDC93-208ENST00000474546 KCNS1Q96KK3 526 aa6.76□□□□□ -1.33
CCDC93-208ENST00000474546 YPEL2Q96QA6 119 aa6.76□□□□□ -1.33
CCDC93-208ENST00000474546 OR6C1Q96RD1 312 aa6.76□□□□□ -1.33
CCDC93-208ENST00000474546 COMMD5Q9GZQ3 224 aa6.76□□□□□ -1.33
CCDC93-208ENST00000474546 STAB1Q9NY15 2570 aa6.76□□□□□ -1.33
CCDC93-208ENST00000474546 JMJD1CQ15652 2540 aa6.76□□□□□ -1.33
CCDC93-208ENST00000474546 PCDH15Q96QU1 1955 aa6.75□□□□□ -1.33
CCDC93-208ENST00000474546 GON4LQ3T8J9 2241 aa6.75□□□□□ -1.33
CCDC93-208ENST00000474546 TRGV8A0A0C4DH27 118 aa6.75□□□□□ -1.33
CCDC93-208ENST00000474546 C5orf63A6NC05 138 aa6.75□□□□□ -1.33
CCDC93-208ENST00000474546 K7EP13 123 aa6.75□□□□□ -1.33
CCDC93-208ENST00000474546 FCN1O00602 326 aa6.75□□□□□ -1.33
CCDC93-208ENST00000474546 AGFG2O95081 481 aa6.75□□□□□ -1.33
CCDC93-208ENST00000474546 S1PR2O95136 353 aa6.75□□□□□ -1.33
CCDC93-208ENST00000474546 TNFSF15O95150 251 aa6.75□□□□□ -1.33
CCDC93-208ENST00000474546 CFIP05156 583 aa6.75□□□□□ -1.33
CCDC93-208ENST00000474546 EDN3P14138 238 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms