RNA–Protein interactions for RNA: ENST00000474157.1

GPNMB-209, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 513 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-209ENST00000474157 SIRT6Q8N6T7 355 aa6.12□□□□□ -1.43
GPNMB-209ENST00000474157 ZNF676Q8N7Q3 588 aa6.12□□□□□ -1.43
GPNMB-209ENST00000474157 DEFB124Q8NES8 71 aa6.12□□□□□ -1.43
GPNMB-209ENST00000474157 ARID1BQ8NFD5 2236 aaPredicted RBP6.12□□□□□ -1.43
GPNMB-209ENST00000474157 OR52E2Q8NGJ4 325 aa6.12□□□□□ -1.43
GPNMB-209ENST00000474157 OR51A4Q8NGJ6 313 aa6.12□□□□□ -1.43
GPNMB-209ENST00000474157 FNDC9Q8TBE3 224 aa6.12□□□□□ -1.43
GPNMB-209ENST00000474157 ZNF502Q8TBZ5 544 aa6.12□□□□□ -1.43
GPNMB-209ENST00000474157 FGF13Q92913 245 aa6.12□□□□□ -1.43
GPNMB-209ENST00000474157 KXD1Q9BQD3 176 aa6.12□□□□□ -1.43
GPNMB-209ENST00000474157 LMF2Q9BU23 707 aaKnown RBP6.12□□□□□ -1.43
GPNMB-209ENST00000474157 TM2D1Q9BX74 207 aa6.12□□□□□ -1.43
GPNMB-209ENST00000474157 SMIM3Q9BZL3 60 aa6.12□□□□□ -1.43
GPNMB-209ENST00000474157 ATG10Q9H0Y0 220 aa6.12□□□□□ -1.43
GPNMB-209ENST00000474157 CXCL16Q9H2A7 254 aa6.12□□□□□ -1.43
GPNMB-209ENST00000474157 MAP1LC3AQ9H492 121 aa6.12□□□□□ -1.43
GPNMB-209ENST00000474157 UBTD1Q9HAC8 227 aa6.12□□□□□ -1.43
GPNMB-209ENST00000474157 DHDHQ9UQ10 334 aa6.12□□□□□ -1.43
GPNMB-209ENST00000474157 MYO18BQ8IUG5 2567 aa6.11□□□□□ -1.43
GPNMB-209ENST00000474157 LOC102725191A0A1B0GVB3 256 aa6.11□□□□□ -1.43
GPNMB-209ENST00000474157 A0A1W2PP11 408 aa6.11□□□□□ -1.43
GPNMB-209ENST00000474157 A0A1W2PPM0 123 aa6.11□□□□□ -1.43
GPNMB-209ENST00000474157 WNT2P09544 360 aa6.11□□□□□ -1.43
GPNMB-209ENST00000474157 FBLP22087 321 aaKnown RBP6.11□□□□□ -1.43
GPNMB-209ENST00000474157 AQP1P29972 269 aa6.11□□□□□ -1.43
GPNMB-209ENST00000474157 TIA1P31483 386 aaKnown RBP eCLIP6.11□□□□□ -1.43
GPNMB-209ENST00000474157 EFNA5P52803 228 aa6.11□□□□□ -1.43
GPNMB-209ENST00000474157 ERVK11-1P61568 191 aa6.11□□□□□ -1.43
GPNMB-209ENST00000474157 RPL8P62917 257 aaKnown RBP6.11□□□□□ -1.43
GPNMB-209ENST00000474157 ZNF85Q03923 595 aa6.11□□□□□ -1.43
GPNMB-209ENST00000474157 CD226Q15762 336 aa6.11□□□□□ -1.43
GPNMB-209ENST00000474157 ITPRIPL2Q3MIP1 535 aa6.11□□□□□ -1.43
GPNMB-209ENST00000474157 SPATA31B1PQ5VZV4 182 aa6.11□□□□□ -1.43
GPNMB-209ENST00000474157 ACSM2BQ68CK6 577 aa6.11□□□□□ -1.43
GPNMB-209ENST00000474157 Q6ZVH6 145 aa6.11□□□□□ -1.43
GPNMB-209ENST00000474157 LRRC25Q8N386 305 aaPredicted RBP6.11□□□□□ -1.43
GPNMB-209ENST00000474157 GCSAMQ8N6F7 178 aa6.11□□□□□ -1.43
GPNMB-209ENST00000474157 ZNF433Q8N7K0 673 aaPredicted RBP6.11□□□□□ -1.43
GPNMB-209ENST00000474157 CDRT4Q8N9R6 151 aa6.11□□□□□ -1.43
GPNMB-209ENST00000474157 OR9G4Q8NGQ1 327 aa6.11□□□□□ -1.43
GPNMB-209ENST00000474157 OR4A16Q8NH70 328 aa6.11□□□□□ -1.43
GPNMB-209ENST00000474157 OR10D3Q8NH80 312 aa6.11□□□□□ -1.43
GPNMB-209ENST00000474157 OR4A5Q8NH83 315 aa6.11□□□□□ -1.43
GPNMB-209ENST00000474157 OR1L3Q8NH93 324 aa6.11□□□□□ -1.43
GPNMB-209ENST00000474157 RNF128Q8TEB7 428 aa6.11□□□□□ -1.43
GPNMB-209ENST00000474157 ZNRF4Q8WWF5 429 aa6.11□□□□□ -1.43
GPNMB-209ENST00000474157 MAL2Q969L2 176 aa6.11□□□□□ -1.43
GPNMB-209ENST00000474157 ZBTB45Q96K62 511 aaPredicted RBP6.11□□□□□ -1.43
GPNMB-209ENST00000474157 KCNS1Q96KK3 526 aa6.11□□□□□ -1.43
GPNMB-209ENST00000474157 PECRQ9BY49 303 aa6.11□□□□□ -1.43
GPNMB-209ENST00000474157 GNB1LQ9BYB4 327 aa6.11□□□□□ -1.43
GPNMB-209ENST00000474157 MRPL32Q9BYC8 188 aaKnown RBP6.11□□□□□ -1.43
GPNMB-209ENST00000474157 PNRC2Q9NPJ4 139 aaKnown RBP6.11□□□□□ -1.43
GPNMB-209ENST00000474157 ZNF581Q9P0T4 197 aa6.11□□□□□ -1.43
GPNMB-209ENST00000474157 ZNF443Q9Y2A4 671 aaPredicted RBP6.11□□□□□ -1.43
GPNMB-209ENST00000474157 SPCS1Q9Y6A9 102 aa6.11□□□□□ -1.43
GPNMB-209ENST00000474157 ASXL3Q9C0F0 2248 aa6.11□□□□□ -1.43
GPNMB-209ENST00000474157 HECTD1Q9ULT8 2610 aa6.11□□□□□ -1.43
GPNMB-209ENST00000474157 SPTA1P02549 2419 aa6.1□□□□□ -1.43
GPNMB-209ENST00000474157 ANKRD12Q6UB98 2062 aa6.1□□□□□ -1.43
GPNMB-209ENST00000474157 TRAV36DV7A0A075B6V5 113 aa6.1□□□□□ -1.43
GPNMB-209ENST00000474157 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.1□□□□□ -1.43
GPNMB-209ENST00000474157 TRBV5-5A0A0J9YX44 114 aa6.1□□□□□ -1.43
GPNMB-209ENST00000474157 IFNL4K9M1U5 179 aa6.1□□□□□ -1.43
GPNMB-209ENST00000474157 SLC17A2O00624 439 aa6.1□□□□□ -1.43
GPNMB-209ENST00000474157 CRXO43186 299 aaPredicted RBP6.1□□□□□ -1.43
GPNMB-209ENST00000474157 PITX3O75364 302 aa6.1□□□□□ -1.43
GPNMB-209ENST00000474157 ZNF324O75467 553 aaPredicted RBP6.1□□□□□ -1.43
GPNMB-209ENST00000474157 DHRS3O75911 302 aa6.1□□□□□ -1.43
GPNMB-209ENST00000474157 SERF1AO75920 110 aa6.1□□□□□ -1.43
GPNMB-209ENST00000474157 MOSP00540 346 aa6.1□□□□□ -1.43
GPNMB-209ENST00000474157 GYPAP02724 150 aa6.1□□□□□ -1.43
GPNMB-209ENST00000474157 FGF1P05230 155 aa6.1□□□□□ -1.43
GPNMB-209ENST00000474157 C3orf79P0CE67 100 aa6.1□□□□□ -1.43
GPNMB-209ENST00000474157 C8orf89P0DMQ9 161 aa6.1□□□□□ -1.43
GPNMB-209ENST00000474157 SRD5A1P18405 259 aa6.1□□□□□ -1.43
GPNMB-209ENST00000474157 IL3RAP26951 378 aa6.1□□□□□ -1.43
GPNMB-209ENST00000474157 GPR183P32249 361 aa6.1□□□□□ -1.43
GPNMB-209ENST00000474157 SFTPDP35247 375 aa6.1□□□□□ -1.43
GPNMB-209ENST00000474157 RPL23P62829 140 aaKnown RBP6.1□□□□□ -1.43
GPNMB-209ENST00000474157 MFGE8Q08431 387 aaPredicted RBP6.1□□□□□ -1.43
GPNMB-209ENST00000474157 OR1Q1Q15612 314 aa6.1□□□□□ -1.43
GPNMB-209ENST00000474157 ZIC1Q15915 447 aa6.1□□□□□ -1.43
GPNMB-209ENST00000474157 IGFBP7Q16270 282 aa6.1□□□□□ -1.43
GPNMB-209ENST00000474157 ZNF766Q5HY98 468 aa6.1□□□□□ -1.43
GPNMB-209ENST00000474157 TMEM215Q68D42 235 aa6.1□□□□□ -1.43
GPNMB-209ENST00000474157 FBXL22Q6P050 247 aa6.1□□□□□ -1.43
GPNMB-209ENST00000474157 RNASEKQ6P5S7 137 aaKnown RBP6.1□□□□□ -1.43
GPNMB-209ENST00000474157 GLIPR1L1Q6UWM5 242 aa6.1□□□□□ -1.43
GPNMB-209ENST00000474157 PLXDC2Q6UX71 529 aa6.1□□□□□ -1.43
GPNMB-209ENST00000474157 PRR22Q8IZ63 422 aa6.1□□□□□ -1.43
GPNMB-209ENST00000474157 ZNF843Q8N446 348 aa6.1□□□□□ -1.43
GPNMB-209ENST00000474157 METTL27Q8N6F8 245 aaPredicted RBP6.1□□□□□ -1.43
GPNMB-209ENST00000474157 OR10G9Q8NGN4 311 aa6.1□□□□□ -1.43
GPNMB-209ENST00000474157 ZNRF2Q8NHG8 242 aa6.1□□□□□ -1.43
GPNMB-209ENST00000474157 TMEM54Q969K7 222 aa6.1□□□□□ -1.43
GPNMB-209ENST00000474157 WDR34Q96EX3 536 aa6.1□□□□□ -1.43
GPNMB-209ENST00000474157 SDF2Q99470 211 aa6.1□□□□□ -1.43
GPNMB-209ENST00000474157 GFI1Q99684 422 aa6.1□□□□□ -1.43
GPNMB-209ENST00000474157 SMIM7Q9BQ49 75 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms