RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 LCN2P80188 198 aa11.89□□□□□ -0.51
HIF3A-206ENST00000472815 IZUMO4Q1ZYL8 232 aa11.89□□□□□ -0.51
HIF3A-206ENST00000472815 MIDNQ504T8 468 aa11.89□□□□□ -0.51
HIF3A-206ENST00000472815 STX12Q86Y82 276 aa11.89□□□□□ -0.51
HIF3A-206ENST00000472815 PNKDQ8N490 385 aa11.89□□□□□ -0.51
HIF3A-206ENST00000472815 OR11H6Q8NGC7 330 aa11.89□□□□□ -0.51
HIF3A-206ENST00000472815 RPEQ96AT9 228 aa11.89□□□□□ -0.51
HIF3A-206ENST00000472815 FLYWCH2Q96CP2 140 aaKnown RBP11.89□□□□□ -0.51
HIF3A-206ENST00000472815 PHYHIPLQ96FC7 376 aa11.89□□□□□ -0.51
HIF3A-206ENST00000472815 TMEM140Q9NV12 185 aa11.89□□□□□ -0.51
HIF3A-206ENST00000472815 ZNRD1Q9P1U0 126 aa11.89□□□□□ -0.51
HIF3A-206ENST00000472815 NBPF19A0A087WUL8 3843 aa11.89□□□□□ -0.51
HIF3A-206ENST00000472815 SCAF4O95104 1147 aaKnown RBP11.89□□□□□ -0.51
HIF3A-206ENST00000472815 NXPH3O95157 252 aa11.89□□□□□ -0.51
HIF3A-206ENST00000472815 SPDEFO95238 335 aa11.89□□□□□ -0.51
HIF3A-206ENST00000472815 HTR1DP28221 377 aa11.89□□□□□ -0.51
HIF3A-206ENST00000472815 EXOSC2Q13868 293 aaKnown RBP11.89□□□□□ -0.51
HIF3A-206ENST00000472815 SSX9Q7RTT3 188 aa11.89□□□□□ -0.51
HIF3A-206ENST00000472815 Q8N7P7 452 aa11.89□□□□□ -0.51
HIF3A-206ENST00000472815 VSTM2AQ8TAG5 236 aa11.89□□□□□ -0.51
HIF3A-206ENST00000472815 STOML3Q8TAV4 291 aa11.89□□□□□ -0.51
HIF3A-206ENST00000472815 ST8SIA2Q92186 375 aa11.89□□□□□ -0.51
HIF3A-206ENST00000472815 LHX4Q969G2 390 aa11.89□□□□□ -0.51
HIF3A-206ENST00000472815 NABP2Q9BQ15 211 aa11.89□□□□□ -0.51
HIF3A-206ENST00000472815 POLR3KQ9Y2Y1 108 aaPredicted RBP11.89□□□□□ -0.51
HIF3A-206ENST00000472815 BORCS7-ASMTA0A0B4J1R7 106 aa11.88□□□□□ -0.51
HIF3A-206ENST00000472815 LEUTXA8MZ59 168 aa11.88□□□□□ -0.51
HIF3A-206ENST00000472815 VWC2LB2RUY7 222 aa11.88□□□□□ -0.51
HIF3A-206ENST00000472815 KCNAB3O43448 404 aa11.88□□□□□ -0.51
HIF3A-206ENST00000472815 JTBO76095 146 aa11.88□□□□□ -0.51
HIF3A-206ENST00000472815 ARG1P05089 322 aa11.88□□□□□ -0.51
HIF3A-206ENST00000472815 SLC25A16P16260 332 aa11.88□□□□□ -0.51
HIF3A-206ENST00000472815 ZFP36P26651 326 aaKnown RBP11.88□□□□□ -0.51
HIF3A-206ENST00000472815 REG1BP48304 166 aa11.88□□□□□ -0.51
HIF3A-206ENST00000472815 EIF5AL1Q6IS14 154 aaKnown RBP11.88□□□□□ -0.51
HIF3A-206ENST00000472815 OR52E5Q8NH55 327 aa11.88□□□□□ -0.51
HIF3A-206ENST00000472815 SMIM8Q96KF7 97 aa11.88□□□□□ -0.51
HIF3A-206ENST00000472815 HARBI1Q96MB7 349 aa11.88□□□□□ -0.51
HIF3A-206ENST00000472815 C11orf1Q9H5F2 150 aa11.88□□□□□ -0.51
HIF3A-206ENST00000472815 SIRT7Q9NRC8 400 aa11.88□□□□□ -0.51
HIF3A-206ENST00000472815 FKBP11Q9NYL4 201 aa11.88□□□□□ -0.51
HIF3A-206ENST00000472815 INSIG2Q9Y5U4 225 aa11.88□□□□□ -0.51
HIF3A-206ENST00000472815 TACC2O95359 2948 aa11.87□□□□□ -0.51
HIF3A-206ENST00000472815 IFNA17P01571 189 aa11.87□□□□□ -0.51
HIF3A-206ENST00000472815 SPCS3P61009 180 aa11.87□□□□□ -0.51
HIF3A-206ENST00000472815 EWSR1Q01844 656 aaKnown RBP eCLIP11.87□□□□□ -0.51
HIF3A-206ENST00000472815 AARDQ4LEZ3 155 aa11.87□□□□□ -0.51
HIF3A-206ENST00000472815 TMEM177Q53S58 311 aa11.87□□□□□ -0.51
HIF3A-206ENST00000472815 OR4A47Q6IF82 309 aa11.87□□□□□ -0.51
HIF3A-206ENST00000472815 ZNF429Q86V71 674 aa11.87□□□□□ -0.51
HIF3A-206ENST00000472815 OR8H3Q8N146 312 aa11.87□□□□□ -0.51
HIF3A-206ENST00000472815 OR4P4Q8NGL7 312 aa11.87□□□□□ -0.51
HIF3A-206ENST00000472815 SCARB1Q8WTV0 552 aa11.87□□□□□ -0.51
HIF3A-206ENST00000472815 BEX4Q9NWD9 120 aaPredicted RBP11.87□□□□□ -0.51
HIF3A-206ENST00000472815 PSENENQ9NZ42 101 aa11.87□□□□□ -0.51
HIF3A-206ENST00000472815 DPM3Q9P2X0 92 aa11.87□□□□□ -0.51
HIF3A-206ENST00000472815 NUP50Q9UKX7 468 aa11.87□□□□□ -0.51
HIF3A-206ENST00000472815 PRNDQ9UKY0 176 aa11.87□□□□□ -0.51
HIF3A-206ENST00000472815 BAHCC1Q9P281 2608 aa11.87□□□□□ -0.51
HIF3A-206ENST00000472815 CEBPZOSA8MTT3 80 aa11.86□□□□□ -0.51
HIF3A-206ENST00000472815 TOX4O94842 621 aa11.86□□□□□ -0.51
HIF3A-206ENST00000472815 OR9G9P0C7N8 305 aa11.86□□□□□ -0.51
HIF3A-206ENST00000472815 RPP30P78346 268 aaKnown RBP11.86□□□□□ -0.51
HIF3A-206ENST00000472815 ZNF266Q14584 549 aa11.86□□□□□ -0.51
HIF3A-206ENST00000472815 HIST2H2BCQ6DN03 193 aa11.86□□□□□ -0.51
HIF3A-206ENST00000472815 CCDC144NLQ6NUI1 221 aa11.86□□□□□ -0.51
HIF3A-206ENST00000472815 VMO1Q7Z5L0 202 aa11.86□□□□□ -0.51
HIF3A-206ENST00000472815 TMEM252Q8N6L7 170 aa11.86□□□□□ -0.51
HIF3A-206ENST00000472815 DTD1Q8TEA8 209 aa11.86□□□□□ -0.51
HIF3A-206ENST00000472815 RBKSQ9H477 322 aa11.86□□□□□ -0.51
HIF3A-206ENST00000472815 BET1LQ9NYM9 111 aa11.86□□□□□ -0.51
HIF3A-206ENST00000472815 FBXL17Q9UF56 701 aa11.86□□□□□ -0.51
HIF3A-206ENST00000472815 FAM24AA6NFZ4 105 aa11.86□□□□□ -0.51
HIF3A-206ENST00000472815 C15orf61A6NNL5 157 aa11.86□□□□□ -0.51
HIF3A-206ENST00000472815 IGKV1-16P04430 117 aa11.86□□□□□ -0.51
HIF3A-206ENST00000472815 LGALS7P47929 136 aa11.86□□□□□ -0.51
HIF3A-206ENST00000472815 DVL1P1P54792 670 aaPredicted RBP11.86□□□□□ -0.51
HIF3A-206ENST00000472815 LGALS4P56470 323 aa11.86□□□□□ -0.51
HIF3A-206ENST00000472815 RPS16P62249 146 aaKnown RBP11.86□□□□□ -0.51
HIF3A-206ENST00000472815 HBG1P69891 147 aa11.86□□□□□ -0.51
HIF3A-206ENST00000472815 HBG2P69892 147 aa11.86□□□□□ -0.51
HIF3A-206ENST00000472815 PAX2Q02962 417 aa11.86□□□□□ -0.51
HIF3A-206ENST00000472815 MINOS1Q5TGZ0 78 aa11.86□□□□□ -0.51
HIF3A-206ENST00000472815 BAP18Q8IXM2 172 aa11.86□□□□□ -0.51
HIF3A-206ENST00000472815 OR4A5Q8NH83 315 aa11.86□□□□□ -0.51
HIF3A-206ENST00000472815 MS4A7Q9GZW8 240 aaPredicted RBP11.86□□□□□ -0.51
HIF3A-206ENST00000472815 FOXA2Q9Y261 457 aaPredicted RBP11.86□□□□□ -0.51
HIF3A-206ENST00000472815 MINOS1-NBL1R4GNA1 71 aa11.86□□□□□ -0.51
HIF3A-206ENST00000472815 HECTD1Q9ULT8 2610 aa11.85□□□□□ -0.51
HIF3A-206ENST00000472815 IGHV1-3A0A0C4DH29 117 aa11.85□□□□□ -0.51
HIF3A-206ENST00000472815 ODF3BA8MYP8 253 aa11.85□□□□□ -0.51
HIF3A-206ENST00000472815 OOSP1A8MZH6 123 aa11.85□□□□□ -0.51
HIF3A-206ENST00000472815 FGF2P09038 288 aa11.85□□□□□ -0.51
HIF3A-206ENST00000472815 IAPPP10997 89 aa11.85□□□□□ -0.51
HIF3A-206ENST00000472815 HTR2BP41595 481 aa11.85□□□□□ -0.51
HIF3A-206ENST00000472815 SULT1A1P50225 295 aa11.85□□□□□ -0.51
HIF3A-206ENST00000472815 RELBQ01201 579 aa11.85□□□□□ -0.51
HIF3A-206ENST00000472815 VMA21Q3ZAQ7 101 aa11.85□□□□□ -0.51
HIF3A-206ENST00000472815 PDLIM3Q53GG5 364 aaPredicted RBP11.85□□□□□ -0.51
HIF3A-206ENST00000472815 VKORC1L1Q8N0U8 176 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms