RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 KCTD12Q96CX2 325 aaKnown RBP15.07■□□□□ 0
COMMD1-208ENST00000472729 SPIN2AQ99865 258 aa15.07■□□□□ 0
COMMD1-208ENST00000472729 SPIN2BQ9BPZ2 258 aa15.07■□□□□ 0
COMMD1-208ENST00000472729 IGKV1D-13A0A0B4J2D9 117 aa15.06■□□□□ 0
COMMD1-208ENST00000472729 IGKV1-13P0DP09 117 aa15.06■□□□□ 0
COMMD1-208ENST00000472729 KIR2DS2P43631 304 aa15.06■□□□□ 0
COMMD1-208ENST00000472729 FXYD4P59646 89 aa15.06■□□□□ 0
COMMD1-208ENST00000472729 HERV-K104P61576 105 aa15.06■□□□□ 0
COMMD1-208ENST00000472729 CDK10Q15131 360 aa15.06■□□□□ 0
COMMD1-208ENST00000472729 MMD2Q8IY49 270 aa15.06■□□□□ 0
COMMD1-208ENST00000472729 MFSD4AQ8N468 514 aa15.06■□□□□ 0
COMMD1-208ENST00000472729 SLC25A46Q96AG3 418 aa15.06■□□□□ 0
COMMD1-208ENST00000472729 RANGRFQ9HD47 186 aaPredicted RBP15.06■□□□□ 0
COMMD1-208ENST00000472729 MEIS3P1A6NDR6 274 aa15.05■□□□□ -0
COMMD1-208ENST00000472729 HRASP01112 189 aa15.05■□□□□ -0
COMMD1-208ENST00000472729 SAA1P0DJI8 122 aaPredicted RBP15.05■□□□□ -0
COMMD1-208ENST00000472729 APELAP0DMC3 54 aa15.05■□□□□ -0
COMMD1-208ENST00000472729 ZP3P21754 424 aa15.05■□□□□ -0
COMMD1-208ENST00000472729 SLURP1P55000 103 aa15.05■□□□□ -0
COMMD1-208ENST00000472729 CATR1Q13166 79 aa15.05■□□□□ -0
COMMD1-208ENST00000472729 OVCH2Q7RTZ1 564 aa15.05■□□□□ -0
COMMD1-208ENST00000472729 ZBTB34Q8NCN2 500 aa15.05■□□□□ -0
COMMD1-208ENST00000472729 OR5AP2Q8NGF4 316 aa15.05■□□□□ -0
COMMD1-208ENST00000472729 SRSF12Q8WXF0 261 aaKnown RBP15.05■□□□□ -0
COMMD1-208ENST00000472729 RHOVQ96L33 236 aa15.05■□□□□ -0
COMMD1-208ENST00000472729 OR4C12Q96R67 309 aa15.05■□□□□ -0
COMMD1-208ENST00000472729 ELOVL1Q9BW60 279 aa15.05■□□□□ -0
COMMD1-208ENST00000472729 FUNDC2Q9BWH2 189 aa15.05■□□□□ -0
COMMD1-208ENST00000472729 SLC5A7Q9GZV3 580 aa15.05■□□□□ -0
COMMD1-208ENST00000472729 COMMD3Q9UBI1 195 aa15.05■□□□□ -0
COMMD1-208ENST00000472729 TGP01266 2768 aa15.05■□□□□ -0
COMMD1-208ENST00000472729 IGHV4OR15-8A0A075B7B6 117 aa15.04■□□□□ -0
COMMD1-208ENST00000472729 A0A087WW49 117 aa15.04■□□□□ -0
COMMD1-208ENST00000472729 DPPA5A6NC42 116 aa15.04■□□□□ -0
COMMD1-208ENST00000472729 TNFSF12O43508 249 aa15.04■□□□□ -0
COMMD1-208ENST00000472729 OR2A4O95047 310 aa15.04■□□□□ -0
COMMD1-208ENST00000472729 PPYP01298 95 aa15.04■□□□□ -0
COMMD1-208ENST00000472729 PRSS3P35030 304 aa15.04■□□□□ -0
COMMD1-208ENST00000472729 DLX4Q92988 240 aaPredicted RBP15.04■□□□□ -0
COMMD1-208ENST00000472729 USMG5Q96IX5 58 aa15.04■□□□□ -0
COMMD1-208ENST00000472729 OR2A7Q96R45 310 aa15.04■□□□□ -0
COMMD1-208ENST00000472729 ZNF430Q9H8G1 570 aaPredicted RBP15.04■□□□□ -0
COMMD1-208ENST00000472729 ANKRD34BA5PLL1 514 aa15.03■□□□□ -0
COMMD1-208ENST00000472729 OR9G9P0C7N8 305 aa15.03■□□□□ -0
COMMD1-208ENST00000472729 PTHLHP12272 177 aa15.03■□□□□ -0
COMMD1-208ENST00000472729 TAS2R46P59540 309 aa15.03■□□□□ -0
COMMD1-208ENST00000472729 TAS2R20P59543 309 aa15.03■□□□□ -0
COMMD1-208ENST00000472729 VBP1P61758 197 aa15.03■□□□□ -0
COMMD1-208ENST00000472729 RPL30P62888 115 aaKnown RBP15.03■□□□□ -0
COMMD1-208ENST00000472729 MSMO1Q15800 293 aa15.03■□□□□ -0
COMMD1-208ENST00000472729 TATDN3Q17R31 274 aa15.03■□□□□ -0
COMMD1-208ENST00000472729 SLC25A42Q86VD7 318 aa15.03■□□□□ -0
COMMD1-208ENST00000472729 TMEM17Q86X19 198 aa15.03■□□□□ -0
COMMD1-208ENST00000472729 OR5H2Q8NGV7 314 aa15.03■□□□□ -0
COMMD1-208ENST00000472729 GIMAP1Q8WWP7 306 aa15.03■□□□□ -0
COMMD1-208ENST00000472729 TINAGL1Q9GZM7 467 aaPredicted RBP15.03■□□□□ -0
COMMD1-208ENST00000472729 CCL28Q9NRJ3 127 aa15.03■□□□□ -0
COMMD1-208ENST00000472729 EHFQ9NZC4 300 aa15.03■□□□□ -0
COMMD1-208ENST00000472729 SCOCQ9UIL1 159 aa15.03■□□□□ -0
COMMD1-208ENST00000472729 ZNF256Q9Y2P7 627 aaPredicted RBP15.03■□□□□ -0
COMMD1-208ENST00000472729 RORCP51449 518 aa15.02■□□□□ -0
COMMD1-208ENST00000472729 NCS1P62166 190 aa15.02■□□□□ -0
COMMD1-208ENST00000472729 ASPHD1Q5U4P2 390 aa15.02■□□□□ -0
COMMD1-208ENST00000472729 MZT2AQ6P582 158 aa15.02■□□□□ -0
COMMD1-208ENST00000472729 VKORC1L1Q8N0U8 176 aa15.02■□□□□ -0
COMMD1-208ENST00000472729 SPAG16Q8N0X2 631 aa15.02■□□□□ -0
COMMD1-208ENST00000472729 AP3S1Q92572 193 aa15.02■□□□□ -0
COMMD1-208ENST00000472729 PRR25Q96S07 402 aa15.02■□□□□ -0
COMMD1-208ENST00000472729 PRKDCP78527 4128 aaKnown RBP15.02□□□□□ -0.01
COMMD1-208ENST00000472729 IGLV2-14P01704 120 aa15.01□□□□□ -0.01
COMMD1-208ENST00000472729 S100GP29377 79 aa15.01□□□□□ -0.01
COMMD1-208ENST00000472729 AADACL3Q5VUY0 350 aa15.01□□□□□ -0.01
COMMD1-208ENST00000472729 OR6Q1Q8NGQ2 317 aa15.01□□□□□ -0.01
COMMD1-208ENST00000472729 CD300LFQ8TDQ1 290 aa15.01□□□□□ -0.01
COMMD1-208ENST00000472729 HRASLSQ9HDD0 168 aa15.01□□□□□ -0.01
COMMD1-208ENST00000472729 SULT1C2O00338 296 aa15□□□□□ -0.01
COMMD1-208ENST00000472729 BRI3O95415 125 aa15□□□□□ -0.01
COMMD1-208ENST00000472729 DHFRP00374 187 aa15□□□□□ -0.01
COMMD1-208ENST00000472729 PMP2P02689 132 aa15□□□□□ -0.01
COMMD1-208ENST00000472729 MAS1LP35410 378 aa15□□□□□ -0.01
COMMD1-208ENST00000472729 SSBP2P81877 361 aaPredicted RBP15□□□□□ -0.01
COMMD1-208ENST00000472729 ATP5G2Q06055 141 aa15□□□□□ -0.01
COMMD1-208ENST00000472729 SSX9Q7RTT3 188 aa15□□□□□ -0.01
COMMD1-208ENST00000472729 CMTM1Q8IZ96 169 aa15□□□□□ -0.01
COMMD1-208ENST00000472729 OR6F1Q8NGZ6 308 aa15□□□□□ -0.01
COMMD1-208ENST00000472729 SNAPC3Q92966 411 aa15□□□□□ -0.01
COMMD1-208ENST00000472729 CMTM3Q96MX0 182 aa15□□□□□ -0.01
COMMD1-208ENST00000472729 FYTTD1Q96QD9 318 aaKnown RBP15□□□□□ -0.01
COMMD1-208ENST00000472729 RSRP1Q9BUV0 290 aa15□□□□□ -0.01
COMMD1-208ENST00000472729 PEF1Q9UBV8 284 aaKnown RBP15□□□□□ -0.01
COMMD1-208ENST00000472729 FAM223BA6NKX1 122 aa14.99□□□□□ -0.01
COMMD1-208ENST00000472729 TRIM64CA6NLI5 447 aa14.99□□□□□ -0.01
COMMD1-208ENST00000472729 FAM25AB3EWG3 89 aa14.99□□□□□ -0.01
COMMD1-208ENST00000472729 FAM25CB3EWG5 89 aa14.99□□□□□ -0.01
COMMD1-208ENST00000472729 FAM25GB3EWG6 89 aa14.99□□□□□ -0.01
COMMD1-208ENST00000472729 KBTBD11O94819 623 aa14.99□□□□□ -0.01
COMMD1-208ENST00000472729 APOA1P02647 267 aa14.99□□□□□ -0.01
COMMD1-208ENST00000472729 RFX2P48378 723 aa14.99□□□□□ -0.01
COMMD1-208ENST00000472729 TSPAN5P62079 268 aa14.99□□□□□ -0.01
COMMD1-208ENST00000472729 ANKRD13BQ86YJ7 626 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms