RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 MAP1LC3BQ9GZQ8 125 aa12.38□□□□□ -0.43
UBXN11-213ENST00000472155 COL6A6A6NMZ7 2263 aa12.38□□□□□ -0.43
UBXN11-213ENST00000472155 TRAV1-1A0A0B4J248 108 aa12.38□□□□□ -0.43
UBXN11-213ENST00000472155 C16orf97H3BN30 126 aa12.38□□□□□ -0.43
UBXN11-213ENST00000472155 RRHO14718 337 aa12.38□□□□□ -0.43
UBXN11-213ENST00000472155 HSPB1P04792 205 aaKnown RBP12.38□□□□□ -0.43
UBXN11-213ENST00000472155 EIF2S3LQ2VIR3 472 aaKnown RBP12.38□□□□□ -0.43
UBXN11-213ENST00000472155 OR10P1Q8NGE3 313 aa12.38□□□□□ -0.43
UBXN11-213ENST00000472155 MBD3L1Q8WWY6 194 aa12.38□□□□□ -0.43
UBXN11-213ENST00000472155 IL19Q9UHD0 177 aa12.38□□□□□ -0.43
UBXN11-213ENST00000472155 KBTBD11-OT1A0A1B0GTJ5 212 aa12.37□□□□□ -0.43
UBXN11-213ENST00000472155 PLXNB1O43157 2135 aa12.37□□□□□ -0.43
UBXN11-213ENST00000472155 BCL2P10415 239 aa12.37□□□□□ -0.43
UBXN11-213ENST00000472155 TAGLN2P37802 199 aaKnown RBP12.37□□□□□ -0.43
UBXN11-213ENST00000472155 SNRPEP62304 92 aaKnown RBP12.37□□□□□ -0.43
UBXN11-213ENST00000472155 TBR1Q16650 682 aa12.37□□□□□ -0.43
UBXN11-213ENST00000472155 TRAT1Q6PIZ9 186 aa12.37□□□□□ -0.43
UBXN11-213ENST00000472155 DPPA3Q6W0C5 159 aa12.37□□□□□ -0.43
UBXN11-213ENST00000472155 LYG1Q8N1E2 194 aa12.37□□□□□ -0.43
UBXN11-213ENST00000472155 Q8N7P7 452 aa12.37□□□□□ -0.43
UBXN11-213ENST00000472155 CA5BP1Q8WTZ4 195 aa12.37□□□□□ -0.43
UBXN11-213ENST00000472155 GFOD1Q9NXC2 390 aa12.37□□□□□ -0.43
UBXN11-213ENST00000472155 TMPRSS2O15393 492 aa12.37□□□□□ -0.43
UBXN11-213ENST00000472155 HBE1P02100 147 aa12.37□□□□□ -0.43
UBXN11-213ENST00000472155 RELBQ01201 579 aa12.37□□□□□ -0.43
UBXN11-213ENST00000472155 ZNF383Q8NA42 475 aa12.37□□□□□ -0.43
UBXN11-213ENST00000472155 PPP1R35Q8TAP8 253 aa12.37□□□□□ -0.43
UBXN11-213ENST00000472155 DDB2Q92466 427 aa12.37□□□□□ -0.43
UBXN11-213ENST00000472155 SDSLQ96GA7 329 aa12.37□□□□□ -0.43
UBXN11-213ENST00000472155 YPEL4Q96NS1 127 aa12.37□□□□□ -0.43
UBXN11-213ENST00000472155 HIPK2Q9H2X6 1198 aa12.37□□□□□ -0.43
UBXN11-213ENST00000472155 ANKHD1Q8IWZ3 2542 aaKnown RBP12.36□□□□□ -0.43
UBXN11-213ENST00000472155 OR2C1O95371 312 aa12.36□□□□□ -0.43
UBXN11-213ENST00000472155 HPRT1P00492 218 aa12.36□□□□□ -0.43
UBXN11-213ENST00000472155 SERF2P84101 59 aa12.36□□□□□ -0.43
UBXN11-213ENST00000472155 RHEBQ15382 184 aa12.36□□□□□ -0.43
UBXN11-213ENST00000472155 ZNF788Q6ZQV5 615 aa12.36□□□□□ -0.43
UBXN11-213ENST00000472155 ZNF561Q8N587 486 aa12.36□□□□□ -0.43
UBXN11-213ENST00000472155 TMEM147Q9BVK8 224 aa12.36□□□□□ -0.43
UBXN11-213ENST00000472155 NPCDR1Q9BY65 106 aa12.36□□□□□ -0.43
UBXN11-213ENST00000472155 TMEM140Q9NV12 185 aa12.36□□□□□ -0.43
UBXN11-213ENST00000472155 OPN1MWP04001 364 aa12.36□□□□□ -0.43
UBXN11-213ENST00000472155 OR8U8P0C7N1 319 aa12.36□□□□□ -0.43
UBXN11-213ENST00000472155 OPN1MW2P0DN77 364 aa12.36□□□□□ -0.43
UBXN11-213ENST00000472155 OPN1MW3P0DN78 364 aa12.36□□□□□ -0.43
UBXN11-213ENST00000472155 RAB5AP20339 215 aa12.36□□□□□ -0.43
UBXN11-213ENST00000472155 SELENOVP59797 346 aa12.36□□□□□ -0.43
UBXN11-213ENST00000472155 C3orf36Q3SXR2 165 aa12.36□□□□□ -0.43
UBXN11-213ENST00000472155 KHDC3LQ587J8 217 aa12.36□□□□□ -0.43
UBXN11-213ENST00000472155 FFAR4Q5NUL3 377 aa12.36□□□□□ -0.43
UBXN11-213ENST00000472155 TMEM108Q6UXF1 575 aa12.36□□□□□ -0.43
UBXN11-213ENST00000472155 MRGPRGQ86SM5 289 aa12.36□□□□□ -0.43
UBXN11-213ENST00000472155 LHX4Q969G2 390 aa12.36□□□□□ -0.43
UBXN11-213ENST00000472155 S1PR3Q99500 378 aa12.36□□□□□ -0.43
UBXN11-213ENST00000472155 MT-ND4LP03901 98 aa12.35□□□□□ -0.43
UBXN11-213ENST00000472155 NDUFB7P17568 137 aa12.35□□□□□ -0.43
UBXN11-213ENST00000472155 PTAFRP25105 342 aa12.35□□□□□ -0.43
UBXN11-213ENST00000472155 SLC39A9Q9NUM3 307 aa12.35□□□□□ -0.43
UBXN11-213ENST00000472155 COL12A1Q99715 3063 aa12.35□□□□□ -0.43
UBXN11-213ENST00000472155 IGKV1-16P04430 117 aa12.35□□□□□ -0.43
UBXN11-213ENST00000472155 CXCL1P09341 107 aa12.35□□□□□ -0.43
UBXN11-213ENST00000472155 CCL3L1P16619 93 aa12.35□□□□□ -0.43
UBXN11-213ENST00000472155 OR4A16Q8NH70 328 aa12.35□□□□□ -0.43
UBXN11-213ENST00000472155 ZCCHC14Q8WYQ9 949 aaKnown RBP12.35□□□□□ -0.43
UBXN11-213ENST00000472155 WFIKKN1Q96NZ8 548 aa12.35□□□□□ -0.43
UBXN11-213ENST00000472155 SSX3Q99909 188 aa12.35□□□□□ -0.43
UBXN11-213ENST00000472155 TRGV10A0A0A0MS01 117 aa12.34□□□□□ -0.43
UBXN11-213ENST00000472155 SMCO3A2RU48 225 aa12.34□□□□□ -0.43
UBXN11-213ENST00000472155 IFNA10P01566 189 aa12.34□□□□□ -0.43
UBXN11-213ENST00000472155 PAX6P26367 422 aa12.34□□□□□ -0.43
UBXN11-213ENST00000472155 CD81P60033 236 aa12.34□□□□□ -0.43
UBXN11-213ENST00000472155 LYPD2Q6UXB3 125 aa12.34□□□□□ -0.43
UBXN11-213ENST00000472155 ZNF439Q8NDP4 499 aa12.34□□□□□ -0.43
UBXN11-213ENST00000472155 OR10G4Q8NGN3 311 aa12.34□□□□□ -0.43
UBXN11-213ENST00000472155 OR10G9Q8NGN4 311 aa12.34□□□□□ -0.43
UBXN11-213ENST00000472155 OR10G7Q8NGN6 311 aa12.34□□□□□ -0.43
UBXN11-213ENST00000472155 RND1Q92730 232 aa12.34□□□□□ -0.43
UBXN11-213ENST00000472155 SMDT1Q9H4I9 107 aa12.34□□□□□ -0.43
UBXN11-213ENST00000472155 CISD1Q9NZ45 108 aaKnown RBP12.34□□□□□ -0.43
UBXN11-213ENST00000472155 NAV3Q8IVL0 2385 aa12.34□□□□□ -0.43
UBXN11-213ENST00000472155 FOLR2P14207 255 aa12.34□□□□□ -0.43
UBXN11-213ENST00000472155 VDAC2P45880 294 aaPredicted RBP12.34□□□□□ -0.43
UBXN11-213ENST00000472155 TCTEX1D1Q8N7M0 179 aa12.34□□□□□ -0.43
UBXN11-213ENST00000472155 KDF1Q8NAX2 398 aaPredicted RBP12.34□□□□□ -0.43
UBXN11-213ENST00000472155 NUP37Q8NFH4 326 aa12.34□□□□□ -0.43
UBXN11-213ENST00000472155 Q8WTZ3 238 aa12.34□□□□□ -0.43
UBXN11-213ENST00000472155 NIPSNAP3BQ9BS92 247 aa12.34□□□□□ -0.43
UBXN11-213ENST00000472155 PARD6GQ9BYG4 376 aaPredicted RBP12.34□□□□□ -0.43
UBXN11-213ENST00000472155 TUBA4BQ9H853 241 aa12.34□□□□□ -0.43
UBXN11-213ENST00000472155 TRAV38-1A0A0B4J264 116 aa12.33□□□□□ -0.44
UBXN11-213ENST00000472155 SRRM4A7MD48 611 aaKnown RBP12.33□□□□□ -0.44
UBXN11-213ENST00000472155 C17orf100A8MU93 164 aa12.33□□□□□ -0.44
UBXN11-213ENST00000472155 MDKP21741 143 aaPredicted RBP12.33□□□□□ -0.44
UBXN11-213ENST00000472155 MRPS11P82912 194 aaKnown RBP12.33□□□□□ -0.44
UBXN11-213ENST00000472155 CENPVQ7Z7K6 275 aaPredicted RBP12.33□□□□□ -0.44
UBXN11-213ENST00000472155 CCL17Q92583 94 aa12.33□□□□□ -0.44
UBXN11-213ENST00000472155 C1orf159Q96HA4 380 aa12.33□□□□□ -0.44
UBXN11-213ENST00000472155 RHOVQ96L33 236 aa12.33□□□□□ -0.44
UBXN11-213ENST00000472155 HEYLQ9NQ87 328 aaPredicted RBP12.33□□□□□ -0.44
UBXN11-213ENST00000472155 LAMP3Q9UQV4 416 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms