RNA–Protein interactions for RNA: ENST00000471496.5

LINC00888-202, long intergenic non-protein coding RNA 888, humanhuman

TSL 3 BASIC

Gene LINC00888, Length 1,490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-202ENST00000471496 PARP11Q9NR21 331 aa9.68□□□□□ -0.86
LINC00888-202ENST00000471496 NUBP2Q9Y5Y2 271 aa9.68□□□□□ -0.86
LINC00888-202ENST00000471496 WSB1Q9Y6I7 421 aa9.68□□□□□ -0.86
LINC00888-202ENST00000471496 NOTCH1P46531 2555 aa9.68□□□□□ -0.86
LINC00888-202ENST00000471496 SHOXO15266 292 aa9.67□□□□□ -0.86
LINC00888-202ENST00000471496 SOX15O60248 233 aa9.67□□□□□ -0.86
LINC00888-202ENST00000471496 PSMB8P28062 276 aa9.67□□□□□ -0.86
LINC00888-202ENST00000471496 TNFSF8P32971 234 aa9.67□□□□□ -0.86
LINC00888-202ENST00000471496 RPL23AP62750 156 aaKnown RBP9.67□□□□□ -0.86
LINC00888-202ENST00000471496 FOXE3Q13461 319 aa9.67□□□□□ -0.86
LINC00888-202ENST00000471496 PLGLAQ15195 96 aa9.67□□□□□ -0.86
LINC00888-202ENST00000471496 VAX1Q5SQQ9 334 aa9.67□□□□□ -0.86
LINC00888-202ENST00000471496 TEX38Q6PEX7 206 aa9.67□□□□□ -0.86
LINC00888-202ENST00000471496 TMEM17Q86X19 198 aa9.67□□□□□ -0.86
LINC00888-202ENST00000471496 MINDY2Q8NBR6 621 aa9.67□□□□□ -0.86
LINC00888-202ENST00000471496 ZBTB34Q8NCN2 500 aa9.67□□□□□ -0.86
LINC00888-202ENST00000471496 MCFD2Q8NI22 146 aa9.67□□□□□ -0.86
LINC00888-202ENST00000471496 OSR1Q8TAX0 266 aaPredicted RBP9.67□□□□□ -0.86
LINC00888-202ENST00000471496 MYOZ3Q8TDC0 251 aa9.67□□□□□ -0.86
LINC00888-202ENST00000471496 GON7Q9BXV9 100 aa9.67□□□□□ -0.86
LINC00888-202ENST00000471496 C6orf62Q9GZU0 229 aaPredicted RBP9.67□□□□□ -0.86
LINC00888-202ENST00000471496 RSL24D1Q9UHA3 163 aaKnown RBP9.67□□□□□ -0.86
LINC00888-202ENST00000471496 TRAV41A0A0B4J266 112 aa9.66□□□□□ -0.86
LINC00888-202ENST00000471496 CCDC160A6NGH7 325 aa9.66□□□□□ -0.86
LINC00888-202ENST00000471496 GABARAPH6UMI1 98 aa9.66□□□□□ -0.86
LINC00888-202ENST00000471496 M0QYG6 137 aa9.66□□□□□ -0.86
LINC00888-202ENST00000471496 RAMP3O60896 148 aa9.66□□□□□ -0.86
LINC00888-202ENST00000471496 VDAC1P21796 283 aa9.66□□□□□ -0.86
LINC00888-202ENST00000471496 UBE2KP61086 200 aa9.66□□□□□ -0.86
LINC00888-202ENST00000471496 HERV-K104P61576 105 aa9.66□□□□□ -0.86
LINC00888-202ENST00000471496 KIAA0141Q14154 515 aaPredicted RBP9.66□□□□□ -0.86
LINC00888-202ENST00000471496 AADACL3Q5VUY0 350 aa9.66□□□□□ -0.86
LINC00888-202ENST00000471496 TEX45Q8NA69 505 aa9.66□□□□□ -0.86
LINC00888-202ENST00000471496 OR6F1Q8NGZ6 308 aa9.66□□□□□ -0.86
LINC00888-202ENST00000471496 C15orf40Q8WUR7 153 aa9.66□□□□□ -0.86
LINC00888-202ENST00000471496 TCTEX1D2Q8WW35 142 aa9.66□□□□□ -0.86
LINC00888-202ENST00000471496 FCAMRQ8WWV6 532 aa9.66□□□□□ -0.86
LINC00888-202ENST00000471496 R3HDM4Q96D70 268 aa9.66□□□□□ -0.86
LINC00888-202ENST00000471496 DIRAS2Q96HU8 199 aa9.66□□□□□ -0.86
LINC00888-202ENST00000471496 DCUN1D5Q9BTE7 237 aa9.66□□□□□ -0.86
LINC00888-202ENST00000471496 FAM103A1Q9BTL3 118 aaKnown RBP9.66□□□□□ -0.86
LINC00888-202ENST00000471496 TINAGL1Q9GZM7 467 aaPredicted RBP9.66□□□□□ -0.86
LINC00888-202ENST00000471496 KLK15Q9H2R5 256 aa9.66□□□□□ -0.86
LINC00888-202ENST00000471496 PRELID3BQ9Y3B1 194 aa9.66□□□□□ -0.86
LINC00888-202ENST00000471496 CTDSPLO15194 276 aa9.66□□□□□ -0.86
LINC00888-202ENST00000471496 CD3DP04234 171 aa9.66□□□□□ -0.86
LINC00888-202ENST00000471496 ELANEP08246 267 aa9.66□□□□□ -0.86
LINC00888-202ENST00000471496 SAA1P0DJI8 122 aaPredicted RBP9.66□□□□□ -0.86
LINC00888-202ENST00000471496 CBX3Q13185 183 aa9.66□□□□□ -0.86
LINC00888-202ENST00000471496 PYHIN1Q6K0P9 492 aa9.66□□□□□ -0.86
LINC00888-202ENST00000471496 ETV3LQ6ZN32 361 aa9.66□□□□□ -0.86
LINC00888-202ENST00000471496 IDO2Q6ZQW0 420 aa9.66□□□□□ -0.86
LINC00888-202ENST00000471496 LHFPL1Q86WI0 220 aa9.66□□□□□ -0.86
LINC00888-202ENST00000471496 VKORC1L1Q8N0U8 176 aa9.66□□□□□ -0.86
LINC00888-202ENST00000471496 OR4F17Q8NGA8 305 aa9.66□□□□□ -0.86
LINC00888-202ENST00000471496 OR4D10Q8NGI6 311 aa9.66□□□□□ -0.86
LINC00888-202ENST00000471496 OR4S2Q8NH73 311 aa9.66□□□□□ -0.86
LINC00888-202ENST00000471496 SMIM4Q8WVI0 70 aa9.66□□□□□ -0.86
LINC00888-202ENST00000471496 OR4F4Q96R69 305 aa9.66□□□□□ -0.86
LINC00888-202ENST00000471496 ZFP57Q9NU63 452 aa9.66□□□□□ -0.86
LINC00888-202ENST00000471496 PGLYRP1O75594 196 aaPredicted RBP9.65□□□□□ -0.87
LINC00888-202ENST00000471496 CD74P04233 296 aa9.65□□□□□ -0.87
LINC00888-202ENST00000471496 MRPS10P82664 201 aaKnown RBP9.65□□□□□ -0.87
LINC00888-202ENST00000471496 FXYD3Q14802 87 aa9.65□□□□□ -0.87
LINC00888-202ENST00000471496 PRSS8Q16651 343 aa9.65□□□□□ -0.87
LINC00888-202ENST00000471496 ECSCRQ19T08 205 aa9.65□□□□□ -0.87
LINC00888-202ENST00000471496 ACTBL2Q562R1 376 aa9.65□□□□□ -0.87
LINC00888-202ENST00000471496 KHDC1LQ5JSQ8 128 aa9.65□□□□□ -0.87
LINC00888-202ENST00000471496 ASPHD1Q5U4P2 390 aa9.65□□□□□ -0.87
LINC00888-202ENST00000471496 FOXB2Q5VYV0 432 aa9.65□□□□□ -0.87
LINC00888-202ENST00000471496 TMEM229BQ8NBD8 167 aa9.65□□□□□ -0.87
LINC00888-202ENST00000471496 LFNGQ8NES3 379 aa9.65□□□□□ -0.87
LINC00888-202ENST00000471496 ARPC1AQ92747 370 aa9.65□□□□□ -0.87
LINC00888-202ENST00000471496 A3GALT2U3KPV4 340 aa9.65□□□□□ -0.87
LINC00888-202ENST00000471496 RBFOX2O43251 390 aaKnown RBP eCLIP9.64□□□□□ -0.87
LINC00888-202ENST00000471496 ZNF735P0CB33 412 aa9.64□□□□□ -0.87
LINC00888-202ENST00000471496 TBPP20226 339 aa9.64□□□□□ -0.87
LINC00888-202ENST00000471496 KIR2DS2P43631 304 aa9.64□□□□□ -0.87
LINC00888-202ENST00000471496 CDX1P47902 265 aaPredicted RBP9.64□□□□□ -0.87
LINC00888-202ENST00000471496 UCP3P55916 312 aa9.64□□□□□ -0.87
LINC00888-202ENST00000471496 TSPAN5P62079 268 aa9.64□□□□□ -0.87
LINC00888-202ENST00000471496 SSBP1Q04837 148 aaKnown RBP9.64□□□□□ -0.87
LINC00888-202ENST00000471496 IL18Q14116 193 aa9.64□□□□□ -0.87
LINC00888-202ENST00000471496 VMA21Q3ZAQ7 101 aa9.64□□□□□ -0.87
LINC00888-202ENST00000471496 AKIRIN2Q53H80 203 aa9.64□□□□□ -0.87
LINC00888-202ENST00000471496 RNASE10Q5GAN6 216 aaKnown RBP9.64□□□□□ -0.87
LINC00888-202ENST00000471496 CXorf66Q5JRM2 361 aaPredicted RBP9.64□□□□□ -0.87
LINC00888-202ENST00000471496 SPAG16Q8N0X2 631 aa9.64□□□□□ -0.87
LINC00888-202ENST00000471496 PUSL1Q8N0Z8 303 aaKnown RBP9.64□□□□□ -0.87
LINC00888-202ENST00000471496 OR51H1Q8NH63 302 aa9.64□□□□□ -0.87
LINC00888-202ENST00000471496 MRGPRFQ96AM1 343 aa9.64□□□□□ -0.87
LINC00888-202ENST00000471496 KRTAP4-12Q9BQ66 201 aa9.64□□□□□ -0.87
LINC00888-202ENST00000471496 RSRP1Q9BUV0 290 aa9.64□□□□□ -0.87
LINC00888-202ENST00000471496 ZNF430Q9H8G1 570 aaPredicted RBP9.64□□□□□ -0.87
LINC00888-202ENST00000471496 A0A1W2PN81 502 aa9.63□□□□□ -0.87
LINC00888-202ENST00000471496 DPPA5A6NC42 116 aa9.63□□□□□ -0.87
LINC00888-202ENST00000471496 GPR31O00270 319 aa9.63□□□□□ -0.87
LINC00888-202ENST00000471496 GSTZ1O43708 216 aaPredicted RBP9.63□□□□□ -0.87
LINC00888-202ENST00000471496 RLN1P04808 185 aa9.63□□□□□ -0.87
LINC00888-202ENST00000471496 IL6RP08887 468 aaPredicted RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms