RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 SLC25A40Q8TBP6 338 aa3.57□□□□□ -1.84
VPS50-210ENST00000471188 CT55Q8WUE5 264 aa3.57□□□□□ -1.84
VPS50-210ENST00000471188 PP6455Q8WZ26 134 aa3.57□□□□□ -1.84
VPS50-210ENST00000471188 CLDN23Q96B33 292 aa3.57□□□□□ -1.84
VPS50-210ENST00000471188 POM121L2Q96KW2 1035 aa3.57□□□□□ -1.84
VPS50-210ENST00000471188 PMCHL2Q9BQD1 86 aa3.57□□□□□ -1.84
VPS50-210ENST00000471188 TIMM29Q9BSF4 260 aa3.57□□□□□ -1.84
VPS50-210ENST00000471188 TMEM70Q9BUB7 260 aa3.57□□□□□ -1.84
VPS50-210ENST00000471188 GNB1LQ9BYB4 327 aa3.57□□□□□ -1.84
VPS50-210ENST00000471188 ST20Q9HBF5 79 aa3.57□□□□□ -1.84
VPS50-210ENST00000471188 JKAMPQ9P055 326 aa3.57□□□□□ -1.84
VPS50-210ENST00000471188 C19orf25Q9UFG5 118 aaPredicted RBP3.57□□□□□ -1.84
VPS50-210ENST00000471188 ZNF835Q9Y2P0 537 aa3.57□□□□□ -1.84
VPS50-210ENST00000471188 SPCS1Q9Y6A9 102 aa3.57□□□□□ -1.84
VPS50-210ENST00000471188 SCN10AQ9Y5Y9 1956 aa3.57□□□□□ -1.84
VPS50-210ENST00000471188 COL4A6Q14031 1691 aa3.57□□□□□ -1.84
VPS50-210ENST00000471188 TRBV9A0A0B4J1U6 114 aa3.57□□□□□ -1.84
VPS50-210ENST00000471188 EDDM13A0A1B0GTR0 161 aa3.57□□□□□ -1.84
VPS50-210ENST00000471188 CXorf51AA0A1B0GTR3 108 aa3.57□□□□□ -1.84
VPS50-210ENST00000471188 F8W735 103 aaPredicted RBP3.57□□□□□ -1.84
VPS50-210ENST00000471188 MS4A18H0YCH9 400 aa3.57□□□□□ -1.84
VPS50-210ENST00000471188 H0YJW9 148 aa3.57□□□□□ -1.84
VPS50-210ENST00000471188 BMPR1BO00238 502 aa3.57□□□□□ -1.84
VPS50-210ENST00000471188 CEACAM5P06731 702 aa3.57□□□□□ -1.84
VPS50-210ENST00000471188 ADH4P08319 380 aa3.57□□□□□ -1.84
VPS50-210ENST00000471188 HIST1H1EP10412 219 aaKnown RBP3.57□□□□□ -1.84
VPS50-210ENST00000471188 F2RP25116 425 aa3.57□□□□□ -1.84
VPS50-210ENST00000471188 GPR183P32249 361 aa3.57□□□□□ -1.84
VPS50-210ENST00000471188 RHOBP62745 196 aa3.57□□□□□ -1.84
VPS50-210ENST00000471188 RPL31P62899 125 aaKnown RBP3.57□□□□□ -1.84
VPS50-210ENST00000471188 PLCXD2Q0VAA5 305 aa3.57□□□□□ -1.84
VPS50-210ENST00000471188 KIR2DS3Q14952 304 aa3.57□□□□□ -1.84
VPS50-210ENST00000471188 MS4A18Q3C1V0 323 aa3.57□□□□□ -1.84
VPS50-210ENST00000471188 TMEM95Q3KNT9 176 aa3.57□□□□□ -1.84
VPS50-210ENST00000471188 TMEM52BQ4KMG9 183 aa3.57□□□□□ -1.84
VPS50-210ENST00000471188 TMEM177Q53S58 311 aa3.57□□□□□ -1.84
VPS50-210ENST00000471188 DCAF12Q5T6F0 453 aa3.57□□□□□ -1.84
VPS50-210ENST00000471188 PET117Q6UWS5 81 aa3.57□□□□□ -1.84
VPS50-210ENST00000471188 SSX8Q7RTT4 187 aa3.57□□□□□ -1.84
VPS50-210ENST00000471188 DOLPP1Q86YN1 238 aa3.57□□□□□ -1.84
VPS50-210ENST00000471188 BPIFA4PQ86YQ2 179 aa3.57□□□□□ -1.84
VPS50-210ENST00000471188 KRTAP1-3Q8IUG1 177 aa3.57□□□□□ -1.84
VPS50-210ENST00000471188 TCEAL8Q8IYN2 117 aa3.57□□□□□ -1.84
VPS50-210ENST00000471188 OR2Z1Q8NG97 314 aa3.57□□□□□ -1.84
VPS50-210ENST00000471188 OR10G3Q8NGC4 313 aa3.57□□□□□ -1.84
VPS50-210ENST00000471188 CCL4L1Q8NHW4 92 aa3.57□□□□□ -1.84
VPS50-210ENST00000471188 MMABQ96EY8 250 aaPredicted RBP3.57□□□□□ -1.84
VPS50-210ENST00000471188 SFXN3Q9BWM7 321 aa3.57□□□□□ -1.84
VPS50-210ENST00000471188 GEMIN7Q9H840 131 aaKnown RBP3.57□□□□□ -1.84
VPS50-210ENST00000471188 KCNIP2Q9NS61 270 aa3.57□□□□□ -1.84
VPS50-210ENST00000471188 HRASLS2Q9NWW9 162 aa3.57□□□□□ -1.84
VPS50-210ENST00000471188 PPIAL4EA0A075B759 164 aa3.56□□□□□ -1.84
VPS50-210ENST00000471188 A0A0G2JMM0 328 aa3.56□□□□□ -1.84
VPS50-210ENST00000471188 A0A1W2PPB8 328 aa3.56□□□□□ -1.84
VPS50-210ENST00000471188 KIR3DP1A8MWS1 328 aa3.56□□□□□ -1.84
VPS50-210ENST00000471188 J3QR89 54 aa3.56□□□□□ -1.84
VPS50-210ENST00000471188 CDIPTO14735 213 aa3.56□□□□□ -1.84
VPS50-210ENST00000471188 SLC25A17O43808 307 aa3.56□□□□□ -1.84
VPS50-210ENST00000471188 PDCD6O75340 191 aa3.56□□□□□ -1.84
VPS50-210ENST00000471188 PGLYRP1O75594 196 aaPredicted RBP3.56□□□□□ -1.84
VPS50-210ENST00000471188 TNFP01375 233 aa3.56□□□□□ -1.84
VPS50-210ENST00000471188 HLA-DQA1P01909 254 aa3.56□□□□□ -1.84
VPS50-210ENST00000471188 CISD3P0C7P0 127 aa3.56□□□□□ -1.84
VPS50-210ENST00000471188 PPIAL4FP0DN26 164 aa3.56□□□□□ -1.84
VPS50-210ENST00000471188 ZXDAP98168 799 aa3.56□□□□□ -1.84
VPS50-210ENST00000471188 AESQ08117 197 aa3.56□□□□□ -1.84
VPS50-210ENST00000471188 SPINK9Q5DT21 86 aa3.56□□□□□ -1.84
VPS50-210ENST00000471188 FNDC7Q5VTL7 733 aa3.56□□□□□ -1.84
VPS50-210ENST00000471188 SFTPA1Q8IWL2 248 aa3.56□□□□□ -1.84
VPS50-210ENST00000471188 KIR3DL3Q8N743 410 aa3.56□□□□□ -1.84
VPS50-210ENST00000471188 RDH5Q92781 318 aa3.56□□□□□ -1.84
VPS50-210ENST00000471188 SPSB1Q96BD6 273 aa3.56□□□□□ -1.84
VPS50-210ENST00000471188 LYZL4Q96KX0 146 aa3.56□□□□□ -1.84
VPS50-210ENST00000471188 ULBP2Q9BZM5 246 aa3.56□□□□□ -1.84
VPS50-210ENST00000471188 TMEM191AQ9H0A3 160 aa3.56□□□□□ -1.84
VPS50-210ENST00000471188 RNASE7Q9H1E1 156 aaKnown RBP3.56□□□□□ -1.84
VPS50-210ENST00000471188 FGF22Q9HCT0 170 aa3.56□□□□□ -1.84
VPS50-210ENST00000471188 GCM1Q9NP62 436 aa3.56□□□□□ -1.84
VPS50-210ENST00000471188 PLEK2Q9NYT0 353 aa3.56□□□□□ -1.84
VPS50-210ENST00000471188 IL36GQ9NZH8 169 aa3.56□□□□□ -1.84
VPS50-210ENST00000471188 MTCH1Q9NZJ7 389 aa3.56□□□□□ -1.84
VPS50-210ENST00000471188 SMPXQ9UHP9 88 aa3.56□□□□□ -1.84
VPS50-210ENST00000471188 ADAMTS9Q9P2N4 1935 aa3.56□□□□□ -1.84
VPS50-210ENST00000471188 A0A0G2JLM5 398 aa3.56□□□□□ -1.84
VPS50-210ENST00000471188 A0A1W2PP55 124 aa3.56□□□□□ -1.84
VPS50-210ENST00000471188 GAGE12HA6NDE8 117 aa3.56□□□□□ -1.84
VPS50-210ENST00000471188 SH2D7A6NKC9 451 aaPredicted RBP3.56□□□□□ -1.84
VPS50-210ENST00000471188 H0Y980 276 aa3.56□□□□□ -1.84
VPS50-210ENST00000471188 IGHG1P01857 330 aa3.56□□□□□ -1.84
VPS50-210ENST00000471188 CYC1P08574 325 aa3.56□□□□□ -1.84
VPS50-210ENST00000471188 SCGB1A1P11684 91 aa3.56□□□□□ -1.84
VPS50-210ENST00000471188 EN2P19622 333 aaPredicted RBP3.56□□□□□ -1.84
VPS50-210ENST00000471188 SRD5A2P31213 254 aa3.56□□□□□ -1.84
VPS50-210ENST00000471188 CAMPP49913 170 aa3.56□□□□□ -1.84
VPS50-210ENST00000471188 RPL8P62917 257 aaKnown RBP3.56□□□□□ -1.84
VPS50-210ENST00000471188 GRB2P62993 217 aaKnown RBP3.56□□□□□ -1.84
VPS50-210ENST00000471188 HIST1H1AQ02539 215 aaPredicted RBP3.56□□□□□ -1.84
VPS50-210ENST00000471188 PSG7Q13046 419 aa3.56□□□□□ -1.84
VPS50-210ENST00000471188 IGFBP7Q16270 282 aa3.56□□□□□ -1.84
VPS50-210ENST00000471188 LTC4SQ16873 150 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms