RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.94□□□□□ -1.94
COL9A1-206ENST00000470652 TEP1Q99973 2627 aaKnown RBP2.94□□□□□ -1.94
COL9A1-206ENST00000470652 PPIAL4EA0A075B759 164 aa2.93□□□□□ -1.94
COL9A1-206ENST00000470652 IGHV3-43A0A0B4J1X8 118 aa2.93□□□□□ -1.94
COL9A1-206ENST00000470652 LINC00854A0A1B0GVQ3 168 aa2.93□□□□□ -1.94
COL9A1-206ENST00000470652 A0A1W2PPE3 182 aa2.93□□□□□ -1.94
COL9A1-206ENST00000470652 TMEM210A6NLX4 147 aa2.93□□□□□ -1.94
COL9A1-206ENST00000470652 CLDN25C9JDP6 229 aa2.93□□□□□ -1.94
COL9A1-206ENST00000470652 PPIAL4DF5H284 164 aa2.93□□□□□ -1.94
COL9A1-206ENST00000470652 TRAPPC2LH3BP13 241 aa2.93□□□□□ -1.94
COL9A1-206ENST00000470652 LGALS8O00214 317 aa2.93□□□□□ -1.94
COL9A1-206ENST00000470652 ZNF737O75373 536 aa2.93□□□□□ -1.94
COL9A1-206ENST00000470652 ARL6IP5O75915 188 aa2.93□□□□□ -1.94
COL9A1-206ENST00000470652 OR7C1O76099 320 aaPredicted RBP2.93□□□□□ -1.94
COL9A1-206ENST00000470652 ALDOBP05062 364 aa2.93□□□□□ -1.94
COL9A1-206ENST00000470652 PPIAL4FP0DN26 164 aa2.93□□□□□ -1.94
COL9A1-206ENST00000470652 IGHV3-43DP0DP04 118 aa2.93□□□□□ -1.94
COL9A1-206ENST00000470652 ZNF44P15621 663 aa2.93□□□□□ -1.94
COL9A1-206ENST00000470652 OMGP23515 440 aa2.93□□□□□ -1.94
COL9A1-206ENST00000470652 CDK2P24941 298 aa2.93□□□□□ -1.94
COL9A1-206ENST00000470652 MAPK3P27361 379 aaPredicted RBP2.93□□□□□ -1.94
COL9A1-206ENST00000470652 PRDX2P32119 198 aa2.93□□□□□ -1.94
COL9A1-206ENST00000470652 PEX19P40855 299 aa2.93□□□□□ -1.94
COL9A1-206ENST00000470652 GPR6P46095 362 aaPredicted RBP2.93□□□□□ -1.94
COL9A1-206ENST00000470652 FGF12P61328 243 aa2.93□□□□□ -1.94
COL9A1-206ENST00000470652 AESQ08117 197 aa2.93□□□□□ -1.94
COL9A1-206ENST00000470652 IL24Q13007 206 aa2.93□□□□□ -1.94
COL9A1-206ENST00000470652 KLRD1Q13241 179 aa2.93□□□□□ -1.94
COL9A1-206ENST00000470652 GNMTQ14749 295 aa2.93□□□□□ -1.94
COL9A1-206ENST00000470652 TRAM1Q15629 374 aa2.93□□□□□ -1.94
COL9A1-206ENST00000470652 ZNF79Q15937 498 aa2.93□□□□□ -1.94
COL9A1-206ENST00000470652 HFEQ30201 348 aa2.93□□□□□ -1.94
COL9A1-206ENST00000470652 ZNF404Q494X3 552 aa2.93□□□□□ -1.94
COL9A1-206ENST00000470652 WDR25Q64LD2 544 aaPredicted RBP2.93□□□□□ -1.94
COL9A1-206ENST00000470652 GLT8D1Q68CQ7 371 aa2.93□□□□□ -1.94
COL9A1-206ENST00000470652 OR52W1Q6IF63 320 aa2.93□□□□□ -1.94
COL9A1-206ENST00000470652 CNIH2Q6PI25 160 aa2.93□□□□□ -1.94
COL9A1-206ENST00000470652 ZNF573Q86YE8 665 aa2.93□□□□□ -1.94
COL9A1-206ENST00000470652 OSR2Q8N2R0 312 aa2.93□□□□□ -1.94
COL9A1-206ENST00000470652 NKAIN3Q8N8D7 197 aa2.93□□□□□ -1.94
COL9A1-206ENST00000470652 ZNF491Q8N8L2 437 aa2.93□□□□□ -1.94
COL9A1-206ENST00000470652 ASCC1Q8N9N2 400 aaKnown RBP2.93□□□□□ -1.94
COL9A1-206ENST00000470652 SUMF2Q8NBJ7 301 aa2.93□□□□□ -1.94
COL9A1-206ENST00000470652 CHST4Q8NCG5 386 aa2.93□□□□□ -1.94
COL9A1-206ENST00000470652 TMEM185AQ8NFB2 350 aa2.93□□□□□ -1.94
COL9A1-206ENST00000470652 OR51T1Q8NGJ9 327 aa2.93□□□□□ -1.94
COL9A1-206ENST00000470652 OR4K15Q8NH41 348 aa2.93□□□□□ -1.94
COL9A1-206ENST00000470652 MCFD2Q8NI22 146 aa2.93□□□□□ -1.94
COL9A1-206ENST00000470652 C17orf50Q8WW18 174 aa2.93□□□□□ -1.94
COL9A1-206ENST00000470652 TECTBQ96PL2 329 aa2.93□□□□□ -1.94
COL9A1-206ENST00000470652 SDHCQ99643 169 aaPredicted RBP2.93□□□□□ -1.94
COL9A1-206ENST00000470652 SPAG8Q99932 426 aaPredicted RBP2.93□□□□□ -1.94
COL9A1-206ENST00000470652 TMEM59Q9BXS4 323 aa2.93□□□□□ -1.94
COL9A1-206ENST00000470652 PECRQ9BY49 303 aa2.93□□□□□ -1.94
COL9A1-206ENST00000470652 PKIBQ9C010 78 aa2.93□□□□□ -1.94
COL9A1-206ENST00000470652 METTL9Q9H1A3 318 aa2.93□□□□□ -1.94
COL9A1-206ENST00000470652 FAIMQ9NVQ4 179 aa2.93□□□□□ -1.94
COL9A1-206ENST00000470652 RHBDL2Q9NX52 303 aa2.93□□□□□ -1.94
COL9A1-206ENST00000470652 EXTL2Q9UBQ6 330 aa2.93□□□□□ -1.94
COL9A1-206ENST00000470652 AK3Q9UIJ7 227 aa2.93□□□□□ -1.94
COL9A1-206ENST00000470652 ST3GAL6Q9Y274 331 aa2.93□□□□□ -1.94
COL9A1-206ENST00000470652 MRPS7Q9Y2R9 242 aaKnown RBP2.93□□□□□ -1.94
COL9A1-206ENST00000470652 PPIAL4AQ9Y536 164 aa2.93□□□□□ -1.94
COL9A1-206ENST00000470652 V9GYH0 126 aa2.93□□□□□ -1.94
COL9A1-206ENST00000470652 F8P00451 2351 aa2.92□□□□□ -1.94
COL9A1-206ENST00000470652 IGKV1-6A0A0C4DH72 117 aa2.92□□□□□ -1.94
COL9A1-206ENST00000470652 MDFIC2A0A1B0GVS7 189 aa2.92□□□□□ -1.94
COL9A1-206ENST00000470652 SMIM31A0A1B0GVY4 71 aa2.92□□□□□ -1.94
COL9A1-206ENST00000470652 FAM25AB3EWG3 89 aa2.92□□□□□ -1.94
COL9A1-206ENST00000470652 FAM25CB3EWG5 89 aa2.92□□□□□ -1.94
COL9A1-206ENST00000470652 FAM25GB3EWG6 89 aa2.92□□□□□ -1.94
COL9A1-206ENST00000470652 MFNGO00587 321 aa2.92□□□□□ -1.94
COL9A1-206ENST00000470652 PDCD5O14737 125 aa2.92□□□□□ -1.94
COL9A1-206ENST00000470652 DEGS1O15121 323 aa2.92□□□□□ -1.94
COL9A1-206ENST00000470652 SLC31A2O15432 143 aa2.92□□□□□ -1.94
COL9A1-206ENST00000470652 MAGEB3O15480 346 aa2.92□□□□□ -1.94
COL9A1-206ENST00000470652 RGS5O15539 181 aa2.92□□□□□ -1.94
COL9A1-206ENST00000470652 NOL3O60936 208 aaKnown RBP2.92□□□□□ -1.94
COL9A1-206ENST00000470652 IGHV2-5P01817 119 aa2.92□□□□□ -1.94
COL9A1-206ENST00000470652 HLA-DQB1P01920 261 aa2.92□□□□□ -1.94
COL9A1-206ENST00000470652 SNRPCP09234 159 aaKnown RBP2.92□□□□□ -1.94
COL9A1-206ENST00000470652 WNT2P09544 360 aa2.92□□□□□ -1.94
COL9A1-206ENST00000470652 RCC1P18754 421 aaPredicted RBP2.92□□□□□ -1.94
COL9A1-206ENST00000470652 GALP22466 123 aa2.92□□□□□ -1.94
COL9A1-206ENST00000470652 BLVRBP30043 206 aaPredicted RBP2.92□□□□□ -1.94
COL9A1-206ENST00000470652 SSTR5P35346 364 aa2.92□□□□□ -1.94
COL9A1-206ENST00000470652 RORCP51449 518 aa2.92□□□□□ -1.94
COL9A1-206ENST00000470652 EDDM3BP56851 147 aa2.92□□□□□ -1.94
COL9A1-206ENST00000470652 TAS2R20P59543 309 aa2.92□□□□□ -1.94
COL9A1-206ENST00000470652 IFITM3Q01628 133 aa2.92□□□□□ -1.94
COL9A1-206ENST00000470652 GRK1Q15835 563 aa2.92□□□□□ -1.94
COL9A1-206ENST00000470652 PAN3Q58A45 887 aaKnown RBP2.92□□□□□ -1.94
COL9A1-206ENST00000470652 LDLRAD2Q5SZI1 272 aa2.92□□□□□ -1.94
COL9A1-206ENST00000470652 PRAMEF5Q5TYX0 476 aa2.92□□□□□ -1.94
COL9A1-206ENST00000470652 TEX36Q5VZQ5 186 aa2.92□□□□□ -1.94
COL9A1-206ENST00000470652 RAB12Q6IQ22 244 aa2.92□□□□□ -1.94
COL9A1-206ENST00000470652 C11orf88Q6PI97 169 aa2.92□□□□□ -1.94
COL9A1-206ENST00000470652 CD164L2Q6UWJ8 174 aa2.92□□□□□ -1.94
COL9A1-206ENST00000470652 Q6ZRG5 221 aa2.92□□□□□ -1.94
COL9A1-206ENST00000470652 SSX8Q7RTT4 187 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms