RNA–Protein interactions for RNA: ENST00000470537.1

XRN1-208, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-208ENST00000470537 SRMP19623 302 aa6.6□□□□□ -1.35
XRN1-208ENST00000470537 ETV1P50549 477 aa6.6□□□□□ -1.35
XRN1-208ENST00000470537 UBE2KP61086 200 aa6.6□□□□□ -1.35
XRN1-208ENST00000470537 HLA-DRB3P79483 266 aa6.6□□□□□ -1.35
XRN1-208ENST00000470537 SSX1Q16384 188 aa6.6□□□□□ -1.35
XRN1-208ENST00000470537 TNXAQ16473 311 aa6.6□□□□□ -1.35
XRN1-208ENST00000470537 PRSS8Q16651 343 aa6.6□□□□□ -1.35
XRN1-208ENST00000470537 TM4SF20Q53R12 229 aa6.6□□□□□ -1.35
XRN1-208ENST00000470537 TMEM177Q53S58 311 aa6.6□□□□□ -1.35
XRN1-208ENST00000470537 LINC00336Q6ZUF6 198 aa6.6□□□□□ -1.35
XRN1-208ENST00000470537 TTC9CQ8N5M4 171 aa6.6□□□□□ -1.35
XRN1-208ENST00000470537 OR2C3Q8N628 320 aa6.6□□□□□ -1.35
XRN1-208ENST00000470537 OR1L6Q8NGR2 347 aa6.6□□□□□ -1.35
XRN1-208ENST00000470537 OSR1Q8TAX0 266 aaPredicted RBP6.6□□□□□ -1.35
XRN1-208ENST00000470537 SRSF12Q8WXF0 261 aaKnown RBP6.6□□□□□ -1.35
XRN1-208ENST00000470537 ACOT12Q8WYK0 555 aa6.6□□□□□ -1.35
XRN1-208ENST00000470537 C9orf16Q9BUW7 83 aa6.6□□□□□ -1.35
XRN1-208ENST00000470537 WFDC10AQ9H1F0 79 aa6.6□□□□□ -1.35
XRN1-208ENST00000470537 C12orf4Q9NQ89 552 aa6.6□□□□□ -1.35
XRN1-208ENST00000470537 RDH8Q9NYR8 311 aa6.6□□□□□ -1.35
XRN1-208ENST00000470537 AASSQ9UDR5 926 aa6.6□□□□□ -1.35
XRN1-208ENST00000470537 DIMT1Q9UNQ2 313 aaKnown RBP6.6□□□□□ -1.35
XRN1-208ENST00000470537 ZNF257Q9Y2Q1 563 aa6.6□□□□□ -1.35
XRN1-208ENST00000470537 RBM7Q9Y580 266 aaKnown RBP6.6□□□□□ -1.35
XRN1-208ENST00000470537 TRDCB7Z8K6 153 aa6.59□□□□□ -1.35
XRN1-208ENST00000470537 PROP1O75360 226 aa6.59□□□□□ -1.35
XRN1-208ENST00000470537 DEDDO75618 318 aa6.59□□□□□ -1.35
XRN1-208ENST00000470537 OR2C1O95371 312 aa6.59□□□□□ -1.35
XRN1-208ENST00000470537 IGLV2-23P01705 113 aa6.59□□□□□ -1.35
XRN1-208ENST00000470537 CD1AP06126 327 aa6.59□□□□□ -1.35
XRN1-208ENST00000470537 APELAP0DMC3 54 aa6.59□□□□□ -1.35
XRN1-208ENST00000470537 MYOD1P15172 320 aa6.59□□□□□ -1.35
XRN1-208ENST00000470537 HTR2CP28335 458 aa6.59□□□□□ -1.35
XRN1-208ENST00000470537 CMC4P56277 68 aaPredicted RBP6.59□□□□□ -1.35
XRN1-208ENST00000470537 RPS11P62280 158 aaKnown RBP eCLIP6.59□□□□□ -1.35
XRN1-208ENST00000470537 SSBP2P81877 361 aaPredicted RBP6.59□□□□□ -1.35
XRN1-208ENST00000470537 LAMTOR1Q6IAA8 161 aa6.59□□□□□ -1.35
XRN1-208ENST00000470537 ZFP1Q6P2D0 407 aa6.59□□□□□ -1.35
XRN1-208ENST00000470537 C5orf24Q7Z6I8 188 aa6.59□□□□□ -1.35
XRN1-208ENST00000470537 MMD2Q8IY49 270 aa6.59□□□□□ -1.35
XRN1-208ENST00000470537 TMEM61Q8N0U2 210 aa6.59□□□□□ -1.35
XRN1-208ENST00000470537 CBR4Q8N4T8 237 aa6.59□□□□□ -1.35
XRN1-208ENST00000470537 MS4A15Q8N5U1 240 aa6.59□□□□□ -1.35
XRN1-208ENST00000470537 UXS1Q8NBZ7 420 aa6.59□□□□□ -1.35
XRN1-208ENST00000470537 ZNF555Q8NEP9 628 aa6.59□□□□□ -1.35
XRN1-208ENST00000470537 OR13C5Q8NGS8 318 aa6.59□□□□□ -1.35
XRN1-208ENST00000470537 OR10J5Q8NHC4 309 aa6.59□□□□□ -1.35
XRN1-208ENST00000470537 TMEM80Q96HE8 168 aa6.59□□□□□ -1.35
XRN1-208ENST00000470537 DERL3Q96Q80 235 aa6.59□□□□□ -1.35
XRN1-208ENST00000470537 TM2D1Q9BX74 207 aa6.59□□□□□ -1.35
XRN1-208ENST00000470537 MRPL27Q9P0M9 148 aaKnown RBP6.59□□□□□ -1.35
XRN1-208ENST00000470537 OR1A1Q9P1Q5 309 aa6.59□□□□□ -1.35
XRN1-208ENST00000470537 HSF4Q9ULV5 492 aa6.59□□□□□ -1.35
XRN1-208ENST00000470537 TRBV7-1A0A0A6YYK4 115 aa6.58□□□□□ -1.36
XRN1-208ENST00000470537 A8MWP6 167 aa6.58□□□□□ -1.36
XRN1-208ENST00000470537 SCAF4O95104 1147 aaKnown RBP6.58□□□□□ -1.36
XRN1-208ENST00000470537 DIRAS3O95661 229 aa6.58□□□□□ -1.36
XRN1-208ENST00000470537 SCTP09683 121 aa6.58□□□□□ -1.36
XRN1-208ENST00000470537 HIST1H1BP16401 226 aaKnown RBP6.58□□□□□ -1.36
XRN1-208ENST00000470537 CELP19835 753 aa6.58□□□□□ -1.36
XRN1-208ENST00000470537 GALP22466 123 aa6.58□□□□□ -1.36
XRN1-208ENST00000470537 ARL3P36405 182 aa6.58□□□□□ -1.36
XRN1-208ENST00000470537 ELLP55199 621 aaPredicted RBP6.58□□□□□ -1.36
XRN1-208ENST00000470537 DEFB135Q30KP9 77 aa6.58□□□□□ -1.36
XRN1-208ENST00000470537 CENPSQ8N2Z9 138 aa6.58□□□□□ -1.36
XRN1-208ENST00000470537 OR4A4PQ8NGN8 299 aa6.58□□□□□ -1.36
XRN1-208ENST00000470537 VSTM2AQ8TAG5 236 aa6.58□□□□□ -1.36
XRN1-208ENST00000470537 PHYHIPQ92561 330 aa6.58□□□□□ -1.36
XRN1-208ENST00000470537 EEF1AKMT3Q96AZ1 226 aa6.58□□□□□ -1.36
XRN1-208ENST00000470537 RNF183Q96D59 192 aa6.58□□□□□ -1.36
XRN1-208ENST00000470537 PGLYRP3Q96LB9 341 aa6.58□□□□□ -1.36
XRN1-208ENST00000470537 CXorf58Q96LI9 332 aa6.58□□□□□ -1.36
XRN1-208ENST00000470537 SPAG8Q99932 426 aaPredicted RBP6.58□□□□□ -1.36
XRN1-208ENST00000470537 CMSS1Q9BQ75 279 aaKnown RBP6.58□□□□□ -1.36
XRN1-208ENST00000470537 DCUN1D5Q9BTE7 237 aa6.58□□□□□ -1.36
XRN1-208ENST00000470537 Q9N2K0 584 aa6.58□□□□□ -1.36
XRN1-208ENST00000470537 FBXL7Q9UJT9 491 aa6.58□□□□□ -1.36
XRN1-208ENST00000470537 UFC1Q9Y3C8 167 aa6.58□□□□□ -1.36
XRN1-208ENST00000470537 PPP5D1E7EU14 171 aa6.57□□□□□ -1.36
XRN1-208ENST00000470537 CYB5BO43169 146 aa6.57□□□□□ -1.36
XRN1-208ENST00000470537 OR2J3O76001 311 aa6.57□□□□□ -1.36
XRN1-208ENST00000470537 DEFA4P12838 97 aa6.57□□□□□ -1.36
XRN1-208ENST00000470537 LINC00205P59089 165 aa6.57□□□□□ -1.36
XRN1-208ENST00000470537 DEFA5Q01523 94 aa6.57□□□□□ -1.36
XRN1-208ENST00000470537 CDK10Q15131 360 aa6.57□□□□□ -1.36
XRN1-208ENST00000470537 RBMS2Q15434 407 aaKnown RBP6.57□□□□□ -1.36
XRN1-208ENST00000470537 C1orf100Q5SVJ3 147 aa6.57□□□□□ -1.36
XRN1-208ENST00000470537 C11orf45Q8TAV5 145 aa6.57□□□□□ -1.36
XRN1-208ENST00000470537 C2CD4CQ8TF44 421 aa6.57□□□□□ -1.36
XRN1-208ENST00000470537 PYDC1Q8WXC3 89 aa6.57□□□□□ -1.36
XRN1-208ENST00000470537 GGHQ92820 318 aa6.57□□□□□ -1.36
XRN1-208ENST00000470537 GALNT14Q96FL9 552 aa6.57□□□□□ -1.36
XRN1-208ENST00000470537 OR2D2Q9H210 308 aa6.57□□□□□ -1.36
XRN1-208ENST00000470537 C5orf66Q9H5L9 145 aa6.57□□□□□ -1.36
XRN1-208ENST00000470537 SDHAF2Q9NX18 166 aa6.57□□□□□ -1.36
XRN1-208ENST00000470537 THYN1Q9P016 225 aa6.57□□□□□ -1.36
XRN1-208ENST00000470537 AK3Q9UIJ7 227 aa6.57□□□□□ -1.36
XRN1-208ENST00000470537 MRPS7Q9Y2R9 242 aaKnown RBP6.57□□□□□ -1.36
XRN1-208ENST00000470537 PRELID3BQ9Y3B1 194 aa6.57□□□□□ -1.36
XRN1-208ENST00000470537 TMEM213A2RRL7 107 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms