RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 SCGB3A2Q96PL1 93 aa11.82□□□□□ -0.52
CDC42SE1-203ENST00000470278 WNT10AQ9GZT5 417 aa11.82□□□□□ -0.52
CDC42SE1-203ENST00000470278 PLEKHA2Q9HB19 425 aa11.82□□□□□ -0.52
CDC42SE1-203ENST00000470278 COMMD9Q9P000 198 aa11.82□□□□□ -0.52
CDC42SE1-203ENST00000470278 METTL1Q9UBP6 276 aaKnown RBP11.82□□□□□ -0.52
CDC42SE1-203ENST00000470278 GPR132Q9UNW8 380 aa11.82□□□□□ -0.52
CDC42SE1-203ENST00000470278 RNF114Q9Y508 228 aa11.82□□□□□ -0.52
CDC42SE1-203ENST00000470278 SH2D7A6NKC9 451 aaPredicted RBP11.81□□□□□ -0.52
CDC42SE1-203ENST00000470278 SRRM4A7MD48 611 aaKnown RBP11.81□□□□□ -0.52
CDC42SE1-203ENST00000470278 MPPED1O15442 326 aa11.81□□□□□ -0.52
CDC42SE1-203ENST00000470278 SLC25A17O43808 307 aa11.81□□□□□ -0.52
CDC42SE1-203ENST00000470278 PEX14O75381 377 aa11.81□□□□□ -0.52
CDC42SE1-203ENST00000470278 B3GALNT1O75752 331 aa11.81□□□□□ -0.52
CDC42SE1-203ENST00000470278 HPRT1P00492 218 aa11.81□□□□□ -0.52
CDC42SE1-203ENST00000470278 CRYGBP07316 175 aa11.81□□□□□ -0.52
CDC42SE1-203ENST00000470278 VSIG10L2P0DP72 767 aa11.81□□□□□ -0.52
CDC42SE1-203ENST00000470278 VDAC2P45880 294 aaPredicted RBP11.81□□□□□ -0.52
CDC42SE1-203ENST00000470278 TAS2R31P59538 309 aa11.81□□□□□ -0.52
CDC42SE1-203ENST00000470278 POU2AF1Q16633 256 aa11.81□□□□□ -0.52
CDC42SE1-203ENST00000470278 VMA21Q3ZAQ7 101 aa11.81□□□□□ -0.52
CDC42SE1-203ENST00000470278 LIN54Q6MZP7 749 aa11.81□□□□□ -0.52
CDC42SE1-203ENST00000470278 SLC35E3Q7Z769 313 aa11.81□□□□□ -0.52
CDC42SE1-203ENST00000470278 TEX45Q8NA69 505 aa11.81□□□□□ -0.52
CDC42SE1-203ENST00000470278 WFDC12Q8WWY7 111 aa11.81□□□□□ -0.52
CDC42SE1-203ENST00000470278 SLC25A21Q9BQT8 299 aaPredicted RBP11.81□□□□□ -0.52
CDC42SE1-203ENST00000470278 AIFM2Q9BRQ8 373 aa11.81□□□□□ -0.52
CDC42SE1-203ENST00000470278 FBXL15Q9H469 300 aa11.81□□□□□ -0.52
CDC42SE1-203ENST00000470278 C5orf66Q9H5L9 145 aa11.81□□□□□ -0.52
CDC42SE1-203ENST00000470278 C14orf166Q9Y224 244 aaKnown RBP11.81□□□□□ -0.52
CDC42SE1-203ENST00000470278 SIGLEC9Q9Y336 463 aa11.81□□□□□ -0.52
CDC42SE1-203ENST00000470278 CENPXA8MT69 81 aa11.8□□□□□ -0.52
CDC42SE1-203ENST00000470278 H0Y980 276 aa11.8□□□□□ -0.52
CDC42SE1-203ENST00000470278 HRASP01112 189 aa11.8□□□□□ -0.52
CDC42SE1-203ENST00000470278 IGF1P05019 195 aa11.8□□□□□ -0.52
CDC42SE1-203ENST00000470278 SAA1P0DJI8 122 aaPredicted RBP11.8□□□□□ -0.52
CDC42SE1-203ENST00000470278 PI3P19957 117 aa11.8□□□□□ -0.52
CDC42SE1-203ENST00000470278 PLGLAQ15195 96 aa11.8□□□□□ -0.52
CDC42SE1-203ENST00000470278 TMEM95Q3KNT9 176 aa11.8□□□□□ -0.52
CDC42SE1-203ENST00000470278 PRR31Q5SQ13 230 aa11.8□□□□□ -0.52
CDC42SE1-203ENST00000470278 PPP1R27Q86WC6 154 aa11.8□□□□□ -0.52
CDC42SE1-203ENST00000470278 FOXRED2Q8IWF2 684 aa11.8□□□□□ -0.52
CDC42SE1-203ENST00000470278 CADM3Q8N126 398 aa11.8□□□□□ -0.52
CDC42SE1-203ENST00000470278 C3orf56Q8N813 242 aa11.8□□□□□ -0.52
CDC42SE1-203ENST00000470278 VSTM2AQ8TAG5 236 aa11.8□□□□□ -0.52
CDC42SE1-203ENST00000470278 WIPF2Q8TF74 440 aaPredicted RBP11.8□□□□□ -0.52
CDC42SE1-203ENST00000470278 HSPB9Q9BQS6 159 aa11.8□□□□□ -0.52
CDC42SE1-203ENST00000470278 RTBDNQ9BSG5 229 aaPredicted RBP11.8□□□□□ -0.52
CDC42SE1-203ENST00000470278 COPZ2Q9P299 210 aa11.8□□□□□ -0.52
CDC42SE1-203ENST00000470278 IGHV7-81A0A0B4J1V7 117 aa11.79□□□□□ -0.52
CDC42SE1-203ENST00000470278 AP4M1O00189 453 aa11.79□□□□□ -0.52
CDC42SE1-203ENST00000470278 CREBL2O60519 120 aaPredicted RBP11.79□□□□□ -0.52
CDC42SE1-203ENST00000470278 FGF2P09038 288 aa11.79□□□□□ -0.52
CDC42SE1-203ENST00000470278 NQO2P16083 231 aa11.79□□□□□ -0.52
CDC42SE1-203ENST00000470278 BTCP35070 178 aa11.79□□□□□ -0.52
CDC42SE1-203ENST00000470278 RBMS2Q15434 407 aaKnown RBP11.79□□□□□ -0.52
CDC42SE1-203ENST00000470278 ZNF585BQ52M93 769 aa11.79□□□□□ -0.52
CDC42SE1-203ENST00000470278 ARSJQ5FYB0 599 aaPredicted RBP11.79□□□□□ -0.52
CDC42SE1-203ENST00000470278 C9orf152Q5JTZ5 239 aa11.79□□□□□ -0.52
CDC42SE1-203ENST00000470278 ZNF562Q6V9R5 426 aa11.79□□□□□ -0.52
CDC42SE1-203ENST00000470278 PUSL1Q8N0Z8 303 aaKnown RBP11.79□□□□□ -0.52
CDC42SE1-203ENST00000470278 RHOVQ96L33 236 aa11.79□□□□□ -0.52
CDC42SE1-203ENST00000470278 TPSG1Q9NRR2 321 aa11.79□□□□□ -0.52
CDC42SE1-203ENST00000470278 VSIG4Q9Y279 399 aa11.79□□□□□ -0.52
CDC42SE1-203ENST00000470278 C3orf85A0A1B0GTC6 90 aa11.78□□□□□ -0.52
CDC42SE1-203ENST00000470278 CRYM-AS1A6NIL9 109 aa11.78□□□□□ -0.52
CDC42SE1-203ENST00000470278 PLA2G10O15496 165 aa11.78□□□□□ -0.52
CDC42SE1-203ENST00000470278 UPK1BO75841 260 aa11.78□□□□□ -0.52
CDC42SE1-203ENST00000470278 KBTBD11O94819 623 aa11.78□□□□□ -0.52
CDC42SE1-203ENST00000470278 S1PR2O95136 353 aa11.78□□□□□ -0.52
CDC42SE1-203ENST00000470278 CA2P00918 260 aa11.78□□□□□ -0.52
CDC42SE1-203ENST00000470278 RPA2P15927 270 aa11.78□□□□□ -0.52
CDC42SE1-203ENST00000470278 CRIP2P52943 208 aaPredicted RBP11.78□□□□□ -0.52
CDC42SE1-203ENST00000470278 MRGPRG-AS1Q2M3A8 158 aa11.78□□□□□ -0.52
CDC42SE1-203ENST00000470278 KLHDC1Q8N7A1 406 aa11.78□□□□□ -0.52
CDC42SE1-203ENST00000470278 SGMS2Q8NHU3 365 aa11.78□□□□□ -0.52
CDC42SE1-203ENST00000470278 CHPT1Q8WUD6 406 aa11.78□□□□□ -0.52
CDC42SE1-203ENST00000470278 ZNF747Q9BV97 191 aa11.78□□□□□ -0.52
CDC42SE1-203ENST00000470278 OR51J1Q9H342 316 aa11.78□□□□□ -0.52
CDC42SE1-203ENST00000470278 BET1LQ9NYM9 111 aa11.78□□□□□ -0.52
CDC42SE1-203ENST00000470278 MARCH11A6NNE9 402 aa11.77□□□□□ -0.53
CDC42SE1-203ENST00000470278 LYRM1O43325 122 aa11.77□□□□□ -0.53
CDC42SE1-203ENST00000470278 OR2A4O95047 310 aa11.77□□□□□ -0.53
CDC42SE1-203ENST00000470278 NDUFB6O95139 128 aa11.77□□□□□ -0.53
CDC42SE1-203ENST00000470278 UCP1P25874 307 aa11.77□□□□□ -0.53
CDC42SE1-203ENST00000470278 CX3CL1P78423 397 aa11.77□□□□□ -0.53
CDC42SE1-203ENST00000470278 SSBP2P81877 361 aaPredicted RBP11.77□□□□□ -0.53
CDC42SE1-203ENST00000470278 NDPQ00604 133 aa11.77□□□□□ -0.53
CDC42SE1-203ENST00000470278 PRSS8Q16651 343 aa11.77□□□□□ -0.53
CDC42SE1-203ENST00000470278 OR4A47Q6IF82 309 aa11.77□□□□□ -0.53
CDC42SE1-203ENST00000470278 VKORC1L1Q8N0U8 176 aa11.77□□□□□ -0.53
CDC42SE1-203ENST00000470278 STPG2Q8N412 459 aa11.77□□□□□ -0.53
CDC42SE1-203ENST00000470278 OR4A5Q8NH83 315 aa11.77□□□□□ -0.53
CDC42SE1-203ENST00000470278 TMEM167AQ8TBQ9 72 aa11.77□□□□□ -0.53
CDC42SE1-203ENST00000470278 TMEM230Q96A57 120 aa11.77□□□□□ -0.53
CDC42SE1-203ENST00000470278 GALNT14Q96FL9 552 aa11.77□□□□□ -0.53
CDC42SE1-203ENST00000470278 OR2A7Q96R45 310 aa11.77□□□□□ -0.53
CDC42SE1-203ENST00000470278 TP53RKQ96S44 253 aa11.77□□□□□ -0.53
CDC42SE1-203ENST00000470278 GON7Q9BXV9 100 aa11.77□□□□□ -0.53
CDC42SE1-203ENST00000470278 NAA60Q9H7X0 242 aa11.77□□□□□ -0.53
CDC42SE1-203ENST00000470278 LINC01548A6NM66 108 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms