RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 OR2W1Q9Y3N9 320 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 SOX21Q9Y651 276 aaPredicted RBP3.82□□□□□ -1.8
SF3B1-208ENST00000470268 ITPR3Q14573 2671 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 CUBNO60494 3623 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 KIAA2026Q5HYC2 2103 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 DSCAML1Q8TD84 2053 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 A0A1W2PPH5 198 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 MPTX1A8MV57 137 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 ODF3BA8MYP8 253 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 J3QR06 171 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 CREBL2O60519 120 aaPredicted RBP3.82□□□□□ -1.8
SF3B1-208ENST00000470268 ACTL6BO94805 426 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 IGHV4-38-2P0DP08 117 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 ANXA3P12429 323 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 GNRHRP30968 328 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 FAUP35544 74 aaKnown RBP3.82□□□□□ -1.8
SF3B1-208ENST00000470268 RAG2P55895 527 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 DHRS2Q13268 280 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 LGALSLQ3ZCW2 172 aaPredicted RBP3.82□□□□□ -1.8
SF3B1-208ENST00000470268 LY6G6FQ5SQ64 297 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 CYB5R2Q6BCY4 276 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 C11orf88Q6PI97 169 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 CLEC9AQ6UXN8 241 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 ZNF818PQ6ZRF7 136 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 LHFPL4Q7Z7J7 247 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 OR11H6Q8NGC7 330 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 OR9G1Q8NH87 305 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 ZNF596Q8TC21 504 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 ZFAND1Q8TCF1 268 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 CASTOR1Q8WTX7 329 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 SECTM1Q8WVN6 248 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 LHX4Q969G2 390 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 TOMM40LQ969M1 308 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 ST6GALNAC6Q969X2 333 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 TMEM230Q96A57 120 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 SEC22AQ96IW7 307 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 C18orf12Q96KH6 178 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 ZNF251Q9BRH9 671 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 ABHD14AQ9BUJ0 271 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 MLST8Q9BVC4 326 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 CLEC7AQ9BXN2 247 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 C5orf66Q9H5L9 145 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 CCL28Q9NRJ3 127 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 AUP1Q9Y679 476 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 ANK3Q12955 4377 aaKnown RBP3.81□□□□□ -1.8
SF3B1-208ENST00000470268 SAA2-SAA4A0A096LPE2 208 aa3.81□□□□□ -1.8
SF3B1-208ENST00000470268 TRAV40A0A0B4J280 105 aa3.81□□□□□ -1.8
SF3B1-208ENST00000470268 DISC1C4P0D8 188 aa3.81□□□□□ -1.8
SF3B1-208ENST00000470268 TRIM77I1YAP6 450 aa3.81□□□□□ -1.8
SF3B1-208ENST00000470268 ITGB1BP1O14713 200 aa3.81□□□□□ -1.8
SF3B1-208ENST00000470268 HLA-AP01891 365 aaKnown RBP3.81□□□□□ -1.8
SF3B1-208ENST00000470268 SAA2P0DJI9 122 aaPredicted RBP3.81□□□□□ -1.8
SF3B1-208ENST00000470268 HTR2BP41595 481 aa3.81□□□□□ -1.8
SF3B1-208ENST00000470268 AP2S1P53680 142 aaPredicted RBP3.81□□□□□ -1.8
SF3B1-208ENST00000470268 EIF4EBP1Q13541 118 aaPredicted RBP3.81□□□□□ -1.8
SF3B1-208ENST00000470268 SLC9A3R2Q15599 337 aa3.81□□□□□ -1.8
SF3B1-208ENST00000470268 HLA-DRB5Q30154 266 aa3.81□□□□□ -1.8
SF3B1-208ENST00000470268 TMEM30BQ3MIR4 351 aa3.81□□□□□ -1.8
SF3B1-208ENST00000470268 LRRC37A5PQ49AS3 106 aa3.81□□□□□ -1.8
SF3B1-208ENST00000470268 RPL39P5Q59GN2 51 aa3.81□□□□□ -1.8
SF3B1-208ENST00000470268 PXDC1Q5TGL8 231 aa3.81□□□□□ -1.8
SF3B1-208ENST00000470268 RUSC1-AS1Q66K80 236 aa3.81□□□□□ -1.8
SF3B1-208ENST00000470268 FAM122CQ6P4D5 195 aa3.81□□□□□ -1.8
SF3B1-208ENST00000470268 BRD3OSQ6XYD6 125 aa3.81□□□□□ -1.8
SF3B1-208ENST00000470268 LYG1Q8N1E2 194 aa3.81□□□□□ -1.8
SF3B1-208ENST00000470268 DYNAPQ8N1N2 210 aa3.81□□□□□ -1.8
SF3B1-208ENST00000470268 LINC00311Q8N616 119 aa3.81□□□□□ -1.8
SF3B1-208ENST00000470268 DRAM1Q8N682 238 aa3.81□□□□□ -1.8
SF3B1-208ENST00000470268 OR2AK2Q8NG84 335 aa3.81□□□□□ -1.8
SF3B1-208ENST00000470268 ZNF431Q8TF32 576 aaPredicted RBP3.81□□□□□ -1.8
SF3B1-208ENST00000470268 PRRT1Q99946 306 aa3.81□□□□□ -1.8
SF3B1-208ENST00000470268 RTBDNQ9BSG5 229 aaPredicted RBP3.81□□□□□ -1.8
SF3B1-208ENST00000470268 OR2D2Q9H210 308 aa3.81□□□□□ -1.8
SF3B1-208ENST00000470268 SDHAF2Q9NX18 166 aa3.81□□□□□ -1.8
SF3B1-208ENST00000470268 SCP2D1Q9UJQ7 156 aa3.81□□□□□ -1.8
SF3B1-208ENST00000470268 GPR132Q9UNW8 380 aa3.81□□□□□ -1.8
SF3B1-208ENST00000470268 MYO9AB2RTY4 2548 aa3.81□□□□□ -1.8
SF3B1-208ENST00000470268 TEX15Q9BXT5 2789 aa3.81□□□□□ -1.8
SF3B1-208ENST00000470268 YLPM1P49750 1951 aaKnown RBP3.8□□□□□ -1.8
SF3B1-208ENST00000470268 hCG_1809904A0A1W2PP81 198 aa3.8□□□□□ -1.8
SF3B1-208ENST00000470268 A0A1W2PPE2 198 aa3.8□□□□□ -1.8
SF3B1-208ENST00000470268 A0A1W2PR64 198 aa3.8□□□□□ -1.8
SF3B1-208ENST00000470268 A0A1W2PRV1 198 aa3.8□□□□□ -1.8
SF3B1-208ENST00000470268 LY6LH3BQJ8 138 aa3.8□□□□□ -1.8
SF3B1-208ENST00000470268 BUB1B-PAK6H3BSN5 160 aa3.8□□□□□ -1.8
SF3B1-208ENST00000470268 HSD17B6O14756 317 aa3.8□□□□□ -1.8
SF3B1-208ENST00000470268 TNFSF12O43508 249 aa3.8□□□□□ -1.8
SF3B1-208ENST00000470268 CD5LO43866 347 aa3.8□□□□□ -1.8
SF3B1-208ENST00000470268 ADAP1O75689 374 aa3.8□□□□□ -1.8
SF3B1-208ENST00000470268 RGS11O94810 467 aa3.8□□□□□ -1.8
SF3B1-208ENST00000470268 MPC2O95563 127 aa3.8□□□□□ -1.8
SF3B1-208ENST00000470268 CFDP00746 253 aaPredicted RBP3.8□□□□□ -1.8
SF3B1-208ENST00000470268 ARG1P05089 322 aa3.8□□□□□ -1.8
SF3B1-208ENST00000470268 IL5P05113 134 aa3.8□□□□□ -1.8
SF3B1-208ENST00000470268 HKR1P10072 659 aa3.8□□□□□ -1.8
SF3B1-208ENST00000470268 CXCL2P19875 107 aa3.8□□□□□ -1.8
SF3B1-208ENST00000470268 REG1BP48304 166 aa3.8□□□□□ -1.8
SF3B1-208ENST00000470268 LUMP51884 338 aaPredicted RBP3.8□□□□□ -1.8
SF3B1-208ENST00000470268 UBE2E1P51965 193 aa3.8□□□□□ -1.8
SF3B1-208ENST00000470268 ZNF137PP52743 207 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms