RNA–Protein interactions for RNA: ENST00000470068.2

CCDC144A-212, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-212ENST00000470068 POLR2AP24928 1970 aaKnown RBP5.26□□□□□ -1.57
CCDC144A-212ENST00000470068 FAM231BA6NCW3 169 aa5.26□□□□□ -1.57
CCDC144A-212ENST00000470068 OR2W5A6NFC9 320 aa5.26□□□□□ -1.57
CCDC144A-212ENST00000470068 ZNF98A6NK75 572 aa5.26□□□□□ -1.57
CCDC144A-212ENST00000470068 PPIHO43447 177 aaKnown RBP5.26□□□□□ -1.57
CCDC144A-212ENST00000470068 IL11P20809 199 aa5.26□□□□□ -1.57
CCDC144A-212ENST00000470068 SNRPD3P62318 126 aaKnown RBP5.26□□□□□ -1.57
CCDC144A-212ENST00000470068 PMP22Q01453 160 aa5.26□□□□□ -1.57
CCDC144A-212ENST00000470068 VWA1Q6PCB0 445 aa5.26□□□□□ -1.57
CCDC144A-212ENST00000470068 SCGB1D4Q6XE38 83 aa5.26□□□□□ -1.57
CCDC144A-212ENST00000470068 SELENOHQ8IZQ5 122 aaKnown RBP5.26□□□□□ -1.57
CCDC144A-212ENST00000470068 SAP25Q8TEE9 199 aa5.26□□□□□ -1.57
CCDC144A-212ENST00000470068 MIEN1Q9BRT3 115 aa5.26□□□□□ -1.57
CCDC144A-212ENST00000470068 ZMAT3Q9HA38 289 aaKnown RBP5.26□□□□□ -1.57
CCDC144A-212ENST00000470068 NXT2Q9NPJ8 142 aaKnown RBP5.26□□□□□ -1.57
CCDC144A-212ENST00000470068 ASCL3Q9NQ33 180 aa5.26□□□□□ -1.57
CCDC144A-212ENST00000470068 KCNE3Q9Y6H6 103 aa5.26□□□□□ -1.57
CCDC144A-212ENST00000470068 URGCP-MRPS24S4R325 110 aa5.26□□□□□ -1.57
CCDC144A-212ENST00000470068 TRPM7Q96QT4 1865 aa5.26□□□□□ -1.57
CCDC144A-212ENST00000470068 DIRC3C9JPN6 131 aa5.26□□□□□ -1.57
CCDC144A-212ENST00000470068 PF4P02776 101 aa5.26□□□□□ -1.57
CCDC144A-212ENST00000470068 RPL31P62899 125 aaKnown RBP5.26□□□□□ -1.57
CCDC144A-212ENST00000470068 TMEM187Q14656 261 aa5.26□□□□□ -1.57
CCDC144A-212ENST00000470068 LTC4SQ16873 150 aa5.26□□□□□ -1.57
CCDC144A-212ENST00000470068 C19orf54Q5BKX5 351 aa5.26□□□□□ -1.57
CCDC144A-212ENST00000470068 IBA57Q5T440 356 aaKnown RBP5.26□□□□□ -1.57
CCDC144A-212ENST00000470068 HIST2H2BCQ6DN03 193 aa5.26□□□□□ -1.57
CCDC144A-212ENST00000470068 DTX2Q86UW9 622 aa5.26□□□□□ -1.57
CCDC144A-212ENST00000470068 SGK494Q96LW2 274 aa5.26□□□□□ -1.57
CCDC144A-212ENST00000470068 OTORQ9NRC9 128 aa5.26□□□□□ -1.57
CCDC144A-212ENST00000470068 LINC00312Q9Y6C7 94 aa5.26□□□□□ -1.57
CCDC144A-212ENST00000470068 SEC16AO15027 2179 aa5.26□□□□□ -1.57
CCDC144A-212ENST00000470068 TUBGCP6Q96RT7 1819 aa5.26□□□□□ -1.57
CCDC144A-212ENST00000470068 SPRY3O43610 288 aa5.25□□□□□ -1.57
CCDC144A-212ENST00000470068 EML2O95834 649 aa5.25□□□□□ -1.57
CCDC144A-212ENST00000470068 TGFAP01135 160 aa5.25□□□□□ -1.57
CCDC144A-212ENST00000470068 IGKV3-11P04433 115 aa5.25□□□□□ -1.57
CCDC144A-212ENST00000470068 HBBP68871 147 aa5.25□□□□□ -1.57
CCDC144A-212ENST00000470068 HIST1H1AQ02539 215 aaPredicted RBP5.25□□□□□ -1.57
CCDC144A-212ENST00000470068 C2orf68Q2NKX9 166 aa5.25□□□□□ -1.57
CCDC144A-212ENST00000470068 TMEM95Q3KNT9 176 aa5.25□□□□□ -1.57
CCDC144A-212ENST00000470068 C9orf135Q5VTT2 229 aa5.25□□□□□ -1.57
CCDC144A-212ENST00000470068 TMEM37Q8WXS4 190 aa5.25□□□□□ -1.57
CCDC144A-212ENST00000470068 MRPL37Q9BZE1 423 aaKnown RBP5.25□□□□□ -1.57
CCDC144A-212ENST00000470068 TGIF2-C20orf24A0A0A6YYL0 155 aa5.25□□□□□ -1.57
CCDC144A-212ENST00000470068 FAM221AA4D161 298 aa5.25□□□□□ -1.57
CCDC144A-212ENST00000470068 SLC17A3O00476 420 aa5.25□□□□□ -1.57
CCDC144A-212ENST00000470068 PGLYRP1O75594 196 aaPredicted RBP5.25□□□□□ -1.57
CCDC144A-212ENST00000470068 FAM157BP0CG42 384 aa5.25□□□□□ -1.57
CCDC144A-212ENST00000470068 SPNP16150 400 aa5.25□□□□□ -1.57
CCDC144A-212ENST00000470068 RCC1P18754 421 aaPredicted RBP5.25□□□□□ -1.57
CCDC144A-212ENST00000470068 BIVMQ86UB2 503 aa5.25□□□□□ -1.57
CCDC144A-212ENST00000470068 FAM89BQ8N5H3 189 aa5.25□□□□□ -1.57
CCDC144A-212ENST00000470068 FAM24BQ8N5W8 94 aa5.25□□□□□ -1.57
CCDC144A-212ENST00000470068 MBD3L1Q8WWY6 194 aa5.25□□□□□ -1.57
CCDC144A-212ENST00000470068 IL36BQ9NZH7 164 aa5.25□□□□□ -1.57
CCDC144A-212ENST00000470068 FUT9Q9Y231 359 aa5.25□□□□□ -1.57
CCDC144A-212ENST00000470068 ASCC3Q8N3C0 2202 aaKnown RBP5.25□□□□□ -1.57
CCDC144A-212ENST00000470068 OR4C46A6NHA9 309 aa5.25□□□□□ -1.57
CCDC144A-212ENST00000470068 SNURFLB1AK76 121 aa5.25□□□□□ -1.57
CCDC144A-212ENST00000470068 F8VVB4 439 aa5.25□□□□□ -1.57
CCDC144A-212ENST00000470068 F8VWA3 439 aa5.25□□□□□ -1.57
CCDC144A-212ENST00000470068 HSPB6O14558 160 aa5.25□□□□□ -1.57
CCDC144A-212ENST00000470068 HINT1P49773 126 aaPredicted RBP5.25□□□□□ -1.57
CCDC144A-212ENST00000470068 LYZP61626 148 aa5.25□□□□□ -1.57
CCDC144A-212ENST00000470068 SRSF9Q13242 221 aaKnown RBP eCLIP5.25□□□□□ -1.57
CCDC144A-212ENST00000470068 C9orf40Q8IXQ3 194 aa5.25□□□□□ -1.57
CCDC144A-212ENST00000470068 PLPPR1Q8TBJ4 325 aa5.25□□□□□ -1.57
CCDC144A-212ENST00000470068 MS4A3Q96HJ5 214 aa5.25□□□□□ -1.57
CCDC144A-212ENST00000470068 OR4C12Q96R67 309 aa5.25□□□□□ -1.57
CCDC144A-212ENST00000470068 TTTY12Q9BZ98 90 aa5.25□□□□□ -1.57
CCDC144A-212ENST00000470068 AP5S1Q9NUS5 200 aa5.25□□□□□ -1.57
CCDC144A-212ENST00000470068 SEMA5BQ9P283 1151 aa5.25□□□□□ -1.57
CCDC144A-212ENST00000470068 ING1Q9UK53 422 aaPredicted RBP5.25□□□□□ -1.57
CCDC144A-212ENST00000470068 IGKV3D-15A0A087WSY6 115 aa5.25□□□□□ -1.57
CCDC144A-212ENST00000470068 IGKV3D-11A0A0A0MRZ8 115 aa5.25□□□□□ -1.57
CCDC144A-212ENST00000470068 A8MXK9 166 aa5.25□□□□□ -1.57
CCDC144A-212ENST00000470068 LMX1BO60663 402 aa5.25□□□□□ -1.57
CCDC144A-212ENST00000470068 PSMB2P49721 201 aa5.25□□□□□ -1.57
CCDC144A-212ENST00000470068 PDCD1Q15116 288 aa5.25□□□□□ -1.57
CCDC144A-212ENST00000470068 MINOS1Q5TGZ0 78 aa5.25□□□□□ -1.57
CCDC144A-212ENST00000470068 OR11H7Q8NGC8 314 aa5.25□□□□□ -1.57
CCDC144A-212ENST00000470068 OR9G4Q8NGQ1 327 aa5.25□□□□□ -1.57
CCDC144A-212ENST00000470068 OR5P3Q8WZ94 311 aa5.25□□□□□ -1.57
CCDC144A-212ENST00000470068 NUDT11Q96G61 164 aa5.25□□□□□ -1.57
CCDC144A-212ENST00000470068 AGMATQ9BSE5 352 aa5.25□□□□□ -1.57
CCDC144A-212ENST00000470068 C2orf88Q9BSF0 95 aa5.25□□□□□ -1.57
CCDC144A-212ENST00000470068 CALYQ9NYX4 217 aa5.25□□□□□ -1.57
CCDC144A-212ENST00000470068 RNF115Q9Y4L5 304 aa5.25□□□□□ -1.57
CCDC144A-212ENST00000470068 LIPGQ9Y5X9 500 aa5.25□□□□□ -1.57
CCDC144A-212ENST00000470068 SIRT4Q9Y6E7 314 aaPredicted RBP5.25□□□□□ -1.57
CCDC144A-212ENST00000470068 MINOS1-NBL1R4GNA1 71 aa5.25□□□□□ -1.57
CCDC144A-212ENST00000470068 GREB1LQ9C091 1923 aaPredicted RBP5.24□□□□□ -1.57
CCDC144A-212ENST00000470068 TRBV6-7A0A0A0MS04 114 aa5.24□□□□□ -1.57
CCDC144A-212ENST00000470068 TRAV34A0A0B4J273 112 aa5.24□□□□□ -1.57
CCDC144A-212ENST00000470068 TRAV20A0A0B4J274 112 aa5.24□□□□□ -1.57
CCDC144A-212ENST00000470068 A0A1B0GTL3 188 aa5.24□□□□□ -1.57
CCDC144A-212ENST00000470068 A0A1B0GV72 72 aa5.24□□□□□ -1.57
CCDC144A-212ENST00000470068 NKX2-6A6NCS4 301 aa5.24□□□□□ -1.57
CCDC144A-212ENST00000470068 C9JCJ5 164 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms