RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 RTP5Q14D33 572 aa11.32□□□□□ -0.6
BRCA1-209ENST00000470026 ACTL10Q5JWF8 245 aa11.32□□□□□ -0.6
BRCA1-209ENST00000470026 LINC00469Q8N7U9 141 aa11.32□□□□□ -0.6
BRCA1-209ENST00000470026 ACY3Q96HD9 319 aa11.32□□□□□ -0.6
BRCA1-209ENST00000470026 GAB2Q9UQC2 676 aa11.32□□□□□ -0.6
BRCA1-209ENST00000470026 IGKV1D-17A0A075B6S4 117 aa11.32□□□□□ -0.6
BRCA1-209ENST00000470026 RBMXL2O75526 392 aaKnown RBP11.32□□□□□ -0.6
BRCA1-209ENST00000470026 AMBPP02760 352 aa11.32□□□□□ -0.6
BRCA1-209ENST00000470026 GCH1P30793 250 aa11.32□□□□□ -0.6
BRCA1-209ENST00000470026 LOXL3P58215 753 aa11.32□□□□□ -0.6
BRCA1-209ENST00000470026 RPP30P78346 268 aaKnown RBP11.32□□□□□ -0.6
BRCA1-209ENST00000470026 GAMTQ14353 236 aa11.32□□□□□ -0.6
BRCA1-209ENST00000470026 JOSD1Q15040 202 aaPredicted RBP11.32□□□□□ -0.6
BRCA1-209ENST00000470026 TRIP6Q15654 476 aaKnown RBP11.32□□□□□ -0.6
BRCA1-209ENST00000470026 NECAP1Q8NC96 275 aa11.32□□□□□ -0.6
BRCA1-209ENST00000470026 PCGF1Q9BSM1 259 aa11.32□□□□□ -0.6
BRCA1-209ENST00000470026 KCNIP2Q9NS61 270 aa11.32□□□□□ -0.6
BRCA1-209ENST00000470026 FZR1Q9UM11 496 aa11.32□□□□□ -0.6
BRCA1-209ENST00000470026 ITGB1BP1O14713 200 aa11.31□□□□□ -0.6
BRCA1-209ENST00000470026 MGST3O14880 152 aa11.31□□□□□ -0.6
BRCA1-209ENST00000470026 FCGR3BO75015 233 aa11.31□□□□□ -0.6
BRCA1-209ENST00000470026 CGAP01215 116 aa11.31□□□□□ -0.6
BRCA1-209ENST00000470026 RD3LP0DJH9 198 aa11.31□□□□□ -0.6
BRCA1-209ENST00000470026 DEFA4P12838 97 aa11.31□□□□□ -0.6
BRCA1-209ENST00000470026 GNB1P62873 340 aa11.31□□□□□ -0.6
BRCA1-209ENST00000470026 LCN2P80188 198 aa11.31□□□□□ -0.6
BRCA1-209ENST00000470026 LINC01551Q86U37 167 aa11.31□□□□□ -0.6
BRCA1-209ENST00000470026 CISD2Q8N5K1 135 aaKnown RBP11.31□□□□□ -0.6
BRCA1-209ENST00000470026 FDCSPQ8NFU4 85 aa11.31□□□□□ -0.6
BRCA1-209ENST00000470026 OR2T10Q8NGZ9 312 aa11.31□□□□□ -0.6
BRCA1-209ENST00000470026 DDB2Q92466 427 aa11.31□□□□□ -0.6
BRCA1-209ENST00000470026 TXNDC17Q9BRA2 123 aa11.31□□□□□ -0.6
BRCA1-209ENST00000470026 IFI27L2Q9H2X8 130 aa11.31□□□□□ -0.6
BRCA1-209ENST00000470026 NCOR1P1Q9H4R4 102 aa11.31□□□□□ -0.6
BRCA1-209ENST00000470026 ZNF71Q9NQZ8 489 aaPredicted RBP11.31□□□□□ -0.6
BRCA1-209ENST00000470026 GALR2O43603 387 aaPredicted RBP11.3□□□□□ -0.6
BRCA1-209ENST00000470026 TNFSF13O75888 250 aa11.3□□□□□ -0.6
BRCA1-209ENST00000470026 CGB3P0DN86 165 aa11.3□□□□□ -0.6
BRCA1-209ENST00000470026 CGB7P0DN87 165 aa11.3□□□□□ -0.6
BRCA1-209ENST00000470026 GPX4P36969 197 aaPredicted RBP11.3□□□□□ -0.6
BRCA1-209ENST00000470026 PKIAP61925 76 aa11.3□□□□□ -0.6
BRCA1-209ENST00000470026 RELBQ01201 579 aa11.3□□□□□ -0.6
BRCA1-209ENST00000470026 TREML4Q6UXN2 200 aa11.3□□□□□ -0.6
BRCA1-209ENST00000470026 TMEM144Q7Z5S9 345 aa11.3□□□□□ -0.6
BRCA1-209ENST00000470026 SARAFQ96BY9 339 aa11.3□□□□□ -0.6
BRCA1-209ENST00000470026 MEGF10Q96KG7 1140 aa11.3□□□□□ -0.6
BRCA1-209ENST00000470026 IMMP2LQ96T52 175 aa11.3□□□□□ -0.6
BRCA1-209ENST00000470026 TRGV8A0A0C4DH27 118 aa11.3□□□□□ -0.6
BRCA1-209ENST00000470026 F6UZH7 168 aa11.3□□□□□ -0.6
BRCA1-209ENST00000470026 GFRA3O60609 400 aa11.3□□□□□ -0.6
BRCA1-209ENST00000470026 NUBP1P53384 320 aa11.3□□□□□ -0.6
BRCA1-209ENST00000470026 MSMPQ1L6U9 139 aa11.3□□□□□ -0.6
BRCA1-209ENST00000470026 GCSAMLQ5JQS6 135 aa11.3□□□□□ -0.6
BRCA1-209ENST00000470026 PRAMEF5Q5TYX0 476 aa11.3□□□□□ -0.6
BRCA1-209ENST00000470026 HCFC1P51610 2035 aa11.3□□□□□ -0.6
BRCA1-209ENST00000470026 TRAV38-1A0A0B4J264 116 aa11.29□□□□□ -0.6
BRCA1-209ENST00000470026 RRHO14718 337 aa11.29□□□□□ -0.6
BRCA1-209ENST00000470026 NKX2-8O15522 239 aa11.29□□□□□ -0.6
BRCA1-209ENST00000470026 IFNA10P01566 189 aa11.29□□□□□ -0.6
BRCA1-209ENST00000470026 STAG3L2P0CL84 134 aa11.29□□□□□ -0.6
BRCA1-209ENST00000470026 STAG3L3P0CL85 134 aa11.29□□□□□ -0.6
BRCA1-209ENST00000470026 KIR2DS2P43631 304 aa11.29□□□□□ -0.6
BRCA1-209ENST00000470026 ZNF134P52741 427 aa11.29□□□□□ -0.6
BRCA1-209ENST00000470026 EDDM3AQ14507 147 aa11.29□□□□□ -0.6
BRCA1-209ENST00000470026 P2RY6Q15077 328 aa11.29□□□□□ -0.6
BRCA1-209ENST00000470026 GCSAMQ8N6F7 178 aa11.29□□□□□ -0.6
BRCA1-209ENST00000470026 PPP1R35Q8TAP8 253 aa11.29□□□□□ -0.6
BRCA1-209ENST00000470026 S100PBPQ96BU1 408 aa11.29□□□□□ -0.6
BRCA1-209ENST00000470026 MGST2Q99735 147 aa11.29□□□□□ -0.6
BRCA1-209ENST00000470026 GGTLC1Q9BX51 225 aa11.29□□□□□ -0.6
BRCA1-209ENST00000470026 DKK4Q9UBT3 224 aa11.29□□□□□ -0.6
BRCA1-209ENST00000470026 LSM4Q9Y4Z0 139 aaKnown RBP11.29□□□□□ -0.6
BRCA1-209ENST00000470026 SLC25A15Q9Y619 301 aa11.29□□□□□ -0.6
BRCA1-209ENST00000470026 TRAV17A0A0B4J275 112 aa11.29□□□□□ -0.6
BRCA1-209ENST00000470026 A0A1W2PPQ1 181 aa11.29□□□□□ -0.6
BRCA1-209ENST00000470026 AHRRA9YTQ3 701 aa11.29□□□□□ -0.6
BRCA1-209ENST00000470026 M0R1X1 148 aa11.29□□□□□ -0.6
BRCA1-209ENST00000470026 ATP5G3P48201 142 aa11.29□□□□□ -0.6
BRCA1-209ENST00000470026 DEFA6Q01524 100 aa11.29□□□□□ -0.6
BRCA1-209ENST00000470026 OR4A16Q8NH70 328 aa11.29□□□□□ -0.6
BRCA1-209ENST00000470026 STARD4Q96DR4 205 aa11.29□□□□□ -0.6
BRCA1-209ENST00000470026 C1orf159Q96HA4 380 aa11.29□□□□□ -0.6
BRCA1-209ENST00000470026 C14orf144Q96I85 54 aa11.29□□□□□ -0.6
BRCA1-209ENST00000470026 CHODLQ9H9P2 273 aa11.29□□□□□ -0.6
BRCA1-209ENST00000470026 GNG12Q9UBI6 72 aa11.29□□□□□ -0.6
BRCA1-209ENST00000470026 PCNX2A6NKB5 2137 aa11.28□□□□□ -0.6
BRCA1-209ENST00000470026 XKRY2A2RUG3 117 aa11.28□□□□□ -0.6
BRCA1-209ENST00000470026 GZMBP10144 247 aa11.28□□□□□ -0.6
BRCA1-209ENST00000470026 CCL11P51671 97 aa11.28□□□□□ -0.6
BRCA1-209ENST00000470026 RPL15P61313 204 aaKnown RBP11.28□□□□□ -0.6
BRCA1-209ENST00000470026 KCNIP4Q6PIL6 250 aa11.28□□□□□ -0.6
BRCA1-209ENST00000470026 OR2Z1Q8NG97 314 aa11.28□□□□□ -0.6
BRCA1-209ENST00000470026 BTF3L4Q96K17 158 aa11.28□□□□□ -0.6
BRCA1-209ENST00000470026 MS4A5Q9H3V2 200 aa11.28□□□□□ -0.6
BRCA1-209ENST00000470026 DUSP13Q9UII6 198 aa11.28□□□□□ -0.6
BRCA1-209ENST00000470026 MUC3AQ02505 3323 aa11.28□□□□□ -0.6
BRCA1-209ENST00000470026 CELSR3Q9NYQ7 3312 aa11.28□□□□□ -0.6
BRCA1-209ENST00000470026 PRR14LQ5THK1 2151 aa11.28□□□□□ -0.6
BRCA1-209ENST00000470026 A0A1W2PPV4 95 aa11.27□□□□□ -0.6
BRCA1-209ENST00000470026 MKRN2OSH3BPM6 223 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms