RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, human

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-208	ENST00000469585	LYG1	Q8N1E2	194 aa		4.97	□□□□□ -1.61
PTCD3-208	ENST00000469585	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	4.97	□□□□□ -1.61
PTCD3-208	ENST00000469585	ZDHHC22	Q8N966	263 aa		4.97	□□□□□ -1.61
PTCD3-208	ENST00000469585	C8orf31	Q8N9H6	132 aa		4.97	□□□□□ -1.61
PTCD3-208	ENST00000469585	OR10V1	Q8NGI7	309 aa		4.97	□□□□□ -1.61
PTCD3-208	ENST00000469585	OR4A4P	Q8NGN8	299 aa		4.97	□□□□□ -1.61
PTCD3-208	ENST00000469585	LGALS14	Q8TCE9	139 aa		4.97	□□□□□ -1.61
PTCD3-208	ENST00000469585	RAB2B	Q8WUD1	216 aa		4.97	□□□□□ -1.61
PTCD3-208	ENST00000469585	ARHGAP5-AS1	Q96IT6	56 aa		4.97	□□□□□ -1.61
PTCD3-208	ENST00000469585	BCL7B	Q9BQE9	202 aa		4.97	□□□□□ -1.61
PTCD3-208	ENST00000469585	SULT4A1	Q9BR01	284 aa		4.97	□□□□□ -1.61
PTCD3-208	ENST00000469585	NICN1	Q9BSH3	213 aa		4.97	□□□□□ -1.61
PTCD3-208	ENST00000469585	FUNDC2	Q9BWH2	189 aa		4.97	□□□□□ -1.61
PTCD3-208	ENST00000469585	PECR	Q9BY49	303 aa		4.97	□□□□□ -1.61
PTCD3-208	ENST00000469585	LPAR5	Q9H1C0	372 aa		4.97	□□□□□ -1.61
PTCD3-208	ENST00000469585	RHBDL2	Q9NX52	303 aa		4.97	□□□□□ -1.61
PTCD3-208	ENST00000469585	AK3	Q9UIJ7	227 aa		4.97	□□□□□ -1.61
PTCD3-208	ENST00000469585	SPATA2	Q9UM82	520 aa		4.97	□□□□□ -1.61
PTCD3-208	ENST00000469585	PSG11	Q9UQ72	335 aa		4.97	□□□□□ -1.61
PTCD3-208	ENST00000469585	ARHGAP32	A7KAX9	2087 aa		4.96	□□□□□ -1.61
PTCD3-208	ENST00000469585	JMJD1C	Q15652	2540 aa		4.96	□□□□□ -1.61
PTCD3-208	ENST00000469585	SETD2	Q9BYW2	2564 aa	Predicted RBP	4.96	□□□□□ -1.62
PTCD3-208	ENST00000469585	IGHV3-43	A0A0B4J1X8	118 aa		4.96	□□□□□ -1.62
PTCD3-208	ENST00000469585	TMEM89	A2RUT3	159 aa		4.96	□□□□□ -1.62
PTCD3-208	ENST00000469585	CLPSL1	A2RUU4	121 aa		4.96	□□□□□ -1.62
PTCD3-208	ENST00000469585	C12orf77	C9JDV5	145 aa		4.96	□□□□□ -1.62
PTCD3-208	ENST00000469585		H7C2Y5	167 aa		4.96	□□□□□ -1.62
PTCD3-208	ENST00000469585	BET1	O15155	118 aa		4.96	□□□□□ -1.62
PTCD3-208	ENST00000469585	SOCS1	O15524	211 aa		4.96	□□□□□ -1.62
PTCD3-208	ENST00000469585	FABP7	O15540	132 aa		4.96	□□□□□ -1.62
PTCD3-208	ENST00000469585	CREBL2	O60519	120 aa	Predicted RBP	4.96	□□□□□ -1.62
PTCD3-208	ENST00000469585	YPEL1	O60688	119 aa		4.96	□□□□□ -1.62
PTCD3-208	ENST00000469585	NDUFA7	O95182	113 aa		4.96	□□□□□ -1.62
PTCD3-208	ENST00000469585	IGHV3-7	P01780	117 aa		4.96	□□□□□ -1.62
PTCD3-208	ENST00000469585	IGHV3-43D	P0DP04	118 aa		4.96	□□□□□ -1.62
PTCD3-208	ENST00000469585	GNB3	P16520	340 aa		4.96	□□□□□ -1.62
PTCD3-208	ENST00000469585	DTYMK	P23919	212 aa		4.96	□□□□□ -1.62
PTCD3-208	ENST00000469585	CD40LG	P29965	261 aa		4.96	□□□□□ -1.62
PTCD3-208	ENST00000469585	MC5R	P33032	325 aa		4.96	□□□□□ -1.62
PTCD3-208	ENST00000469585	CEACAM6	P40199	344 aa		4.96	□□□□□ -1.62
PTCD3-208	ENST00000469585	VDAC2	P45880	294 aa	Predicted RBP	4.96	□□□□□ -1.62
PTCD3-208	ENST00000469585	RPL5	P46777	297 aa	Known RBP	4.96	□□□□□ -1.62
PTCD3-208	ENST00000469585	OR3A3	P47888	321 aa		4.96	□□□□□ -1.62
PTCD3-208	ENST00000469585	DLX6	P56179	175 aa		4.96	□□□□□ -1.62
PTCD3-208	ENST00000469585	SLC35B1	P78383	322 aa		4.96	□□□□□ -1.62
PTCD3-208	ENST00000469585	UNC119	Q13432	240 aa		4.96	□□□□□ -1.62
PTCD3-208	ENST00000469585	RTL8B	Q17RB0	113 aa		4.96	□□□□□ -1.62
PTCD3-208	ENST00000469585	C17orf58	Q2M2W7	97 aa		4.96	□□□□□ -1.62
PTCD3-208	ENST00000469585	CDNF	Q49AH0	187 aa		4.96	□□□□□ -1.62
PTCD3-208	ENST00000469585	GPR107	Q5VW38	600 aa		4.96	□□□□□ -1.62
PTCD3-208	ENST00000469585	OLFML2A	Q68BL7	652 aa		4.96	□□□□□ -1.62
PTCD3-208	ENST00000469585	FAM71F2	Q6NXP2	309 aa		4.96	□□□□□ -1.62
PTCD3-208	ENST00000469585	LHFPL4	Q7Z7J7	247 aa		4.96	□□□□□ -1.62
PTCD3-208	ENST00000469585	FAM89B	Q8N5H3	189 aa		4.96	□□□□□ -1.62
PTCD3-208	ENST00000469585	SAMD12	Q8N8I0	201 aa		4.96	□□□□□ -1.62
PTCD3-208	ENST00000469585	OR8H1	Q8NGG4	311 aa		4.96	□□□□□ -1.62
PTCD3-208	ENST00000469585	OR2T10	Q8NGZ9	312 aa		4.96	□□□□□ -1.62
PTCD3-208	ENST00000469585	SGMS2	Q8NHU3	365 aa		4.96	□□□□□ -1.62
PTCD3-208	ENST00000469585	MRPL30	Q8TCC3	161 aa	Known RBP	4.96	□□□□□ -1.62
PTCD3-208	ENST00000469585	ST6GAL2	Q96JF0	529 aa		4.96	□□□□□ -1.62
PTCD3-208	ENST00000469585	YPEL2	Q96QA6	119 aa		4.96	□□□□□ -1.62
PTCD3-208	ENST00000469585	RASL11B	Q9BPW5	248 aa		4.96	□□□□□ -1.62
PTCD3-208	ENST00000469585	ZNF251	Q9BRH9	671 aa		4.96	□□□□□ -1.62
PTCD3-208	ENST00000469585	ST6GALNAC5	Q9BVH7	336 aa		4.96	□□□□□ -1.62
PTCD3-208	ENST00000469585	DCSTAMP	Q9H295	470 aa		4.96	□□□□□ -1.62
PTCD3-208	ENST00000469585	LINC00574	Q9H8X3	128 aa		4.96	□□□□□ -1.62
PTCD3-208	ENST00000469585	RABL2A	Q9UBK7	228 aa	Predicted RBP	4.96	□□□□□ -1.62
PTCD3-208	ENST00000469585	RABL2B	Q9UNT1	228 aa		4.96	□□□□□ -1.62
PTCD3-208	ENST00000469585	TCF19	Q9Y242	345 aa		4.96	□□□□□ -1.62
PTCD3-208	ENST00000469585	MOB4	Q9Y3A3	225 aa		4.96	□□□□□ -1.62
PTCD3-208	ENST00000469585	NIPBL	Q6KC79	2804 aa	eCLIP	4.95	□□□□□ -1.62
PTCD3-208	ENST00000469585	TRAV18	A0A075B6X5	111 aa		4.95	□□□□□ -1.62
PTCD3-208	ENST00000469585	TRBV6-6	A0A0A6YYG2	114 aa		4.95	□□□□□ -1.62
PTCD3-208	ENST00000469585	TRAV39	A0A0B4J263	110 aa		4.95	□□□□□ -1.62
PTCD3-208	ENST00000469585		A0A0B4J293	547 aa		4.95	□□□□□ -1.62
PTCD3-208	ENST00000469585	IFITM10	A6NMD0	228 aa		4.95	□□□□□ -1.62
PTCD3-208	ENST00000469585	FCN3	O75636	299 aa		4.95	□□□□□ -1.62
PTCD3-208	ENST00000469585	OR2F2	O95006	317 aa		4.95	□□□□□ -1.62
PTCD3-208	ENST00000469585	MOS	P00540	346 aa		4.95	□□□□□ -1.62
PTCD3-208	ENST00000469585	IFNA6	P05013	189 aa		4.95	□□□□□ -1.62
PTCD3-208	ENST00000469585	FCGR3A	P08637	254 aa		4.95	□□□□□ -1.62
PTCD3-208	ENST00000469585	RRAS	P10301	218 aa		4.95	□□□□□ -1.62
PTCD3-208	ENST00000469585	SLC2A2	P11168	524 aa	Predicted RBP	4.95	□□□□□ -1.62
PTCD3-208	ENST00000469585	RCC1	P18754	421 aa	Predicted RBP	4.95	□□□□□ -1.62
PTCD3-208	ENST00000469585	S100A5	P33763	92 aa		4.95	□□□□□ -1.62
PTCD3-208	ENST00000469585	PPP1CC	P36873	323 aa	Known RBP	4.95	□□□□□ -1.62
PTCD3-208	ENST00000469585	TMBIM6	P55061	237 aa		4.95	□□□□□ -1.62
PTCD3-208	ENST00000469585	DLX1	P56177	255 aa		4.95	□□□□□ -1.62
PTCD3-208	ENST00000469585	TAS2R46	P59540	309 aa		4.95	□□□□□ -1.62
PTCD3-208	ENST00000469585	HERV-K104	P61576	105 aa		4.95	□□□□□ -1.62
PTCD3-208	ENST00000469585	VBP1	P61758	197 aa		4.95	□□□□□ -1.62
PTCD3-208	ENST00000469585	ZNF816	Q0VGE8	651 aa	Predicted RBP	4.95	□□□□□ -1.62
PTCD3-208	ENST00000469585	HMGN3	Q15651	99 aa		4.95	□□□□□ -1.62
PTCD3-208	ENST00000469585	MORN2	Q502X0	79 aa		4.95	□□□□□ -1.62
PTCD3-208	ENST00000469585	HACD4	Q5VWC8	232 aa		4.95	□□□□□ -1.62
PTCD3-208	ENST00000469585	BAIAP2L2	Q6UXY1	529 aa		4.95	□□□□□ -1.62
PTCD3-208	ENST00000469585	RBPMS2	Q6ZRY4	209 aa	Known RBP	4.95	□□□□□ -1.62
PTCD3-208	ENST00000469585	SLC25A48	Q6ZT89	311 aa	Known RBP	4.95	□□□□□ -1.62
PTCD3-208	ENST00000469585	TMEM17	Q86X19	198 aa		4.95	□□□□□ -1.62
PTCD3-208	ENST00000469585	CLVS1	Q8IUQ0	354 aa	Predicted RBP	4.95	□□□□□ -1.62

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