RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 GID4Q8IVV7 300 aa3.81□□□□□ -1.8
PTPN4-209ENST00000469511 KIR2DL5AQ8N109 375 aa3.81□□□□□ -1.8
PTPN4-209ENST00000469511 OR1L6Q8NGR2 347 aa3.81□□□□□ -1.8
PTPN4-209ENST00000469511 KIR2DL5BQ8NHK3 375 aa3.81□□□□□ -1.8
PTPN4-209ENST00000469511 GLMPQ8WWB7 406 aa3.81□□□□□ -1.8
PTPN4-209ENST00000469511 CCDC124Q96CT7 223 aaKnown RBP3.81□□□□□ -1.8
PTPN4-209ENST00000469511 TSNAXQ99598 290 aaKnown RBP3.81□□□□□ -1.8
PTPN4-209ENST00000469511 RNF5Q99942 180 aa3.81□□□□□ -1.8
PTPN4-209ENST00000469511 SULT4A1Q9BR01 284 aa3.81□□□□□ -1.8
PTPN4-209ENST00000469511 TEX12Q9BXU0 123 aa3.81□□□□□ -1.8
PTPN4-209ENST00000469511 C11orf68Q9H3H3 251 aaKnown RBP3.81□□□□□ -1.8
PTPN4-209ENST00000469511 PIPOXQ9P0Z9 390 aa3.81□□□□□ -1.8
PTPN4-209ENST00000469511 CELA1Q9UNI1 258 aa3.81□□□□□ -1.8
PTPN4-209ENST00000469511 SRRM2Q9UQ35 2752 aaKnown RBP3.81□□□□□ -1.8
PTPN4-209ENST00000469511 FAT1Q14517 4588 aa3.8□□□□□ -1.8
PTPN4-209ENST00000469511 TRAV8-7A0A075B6U6 113 aa3.8□□□□□ -1.8
PTPN4-209ENST00000469511 IGHV3OR16-8A0A075B7F1 116 aa3.8□□□□□ -1.8
PTPN4-209ENST00000469511 IGKV1-6A0A0C4DH72 117 aa3.8□□□□□ -1.8
PTPN4-209ENST00000469511 A8MWP6 167 aa3.8□□□□□ -1.8
PTPN4-209ENST00000469511 FKBP6O75344 327 aa3.8□□□□□ -1.8
PTPN4-209ENST00000469511 RBBP9O75884 186 aa3.8□□□□□ -1.8
PTPN4-209ENST00000469511 C8orf88P0DMB2 117 aa3.8□□□□□ -1.8
PTPN4-209ENST00000469511 INAFM2P0DMQ5 153 aa3.8□□□□□ -1.8
PTPN4-209ENST00000469511 GTF2F2P13984 249 aa3.8□□□□□ -1.8
PTPN4-209ENST00000469511 MYOD1P15172 320 aa3.8□□□□□ -1.8
PTPN4-209ENST00000469511 RPA2P15927 270 aa3.8□□□□□ -1.8
PTPN4-209ENST00000469511 ARL3P36405 182 aa3.8□□□□□ -1.8
PTPN4-209ENST00000469511 TCTAP57738 103 aa3.8□□□□□ -1.8
PTPN4-209ENST00000469511 MED21Q13503 144 aa3.8□□□□□ -1.8
PTPN4-209ENST00000469511 TNXAQ16473 311 aa3.8□□□□□ -1.8
PTPN4-209ENST00000469511 TMEM30BQ3MIR4 351 aa3.8□□□□□ -1.8
PTPN4-209ENST00000469511 RNASE12Q5GAN4 147 aaKnown RBP3.8□□□□□ -1.8
PTPN4-209ENST00000469511 OR10K2Q6IF99 312 aa3.8□□□□□ -1.8
PTPN4-209ENST00000469511 FAM71F2Q6NXP2 309 aa3.8□□□□□ -1.8
PTPN4-209ENST00000469511 GLIPR1L1Q6UWM5 242 aa3.8□□□□□ -1.8
PTPN4-209ENST00000469511 CEACAM19Q7Z692 300 aa3.8□□□□□ -1.8
PTPN4-209ENST00000469511 LINC00596Q86U02 117 aa3.8□□□□□ -1.8
PTPN4-209ENST00000469511 GPHB5Q86YW7 130 aa3.8□□□□□ -1.8
PTPN4-209ENST00000469511 Q8NAQ8 132 aa3.8□□□□□ -1.8
PTPN4-209ENST00000469511 OR5AK2Q8NH90 309 aa3.8□□□□□ -1.8
PTPN4-209ENST00000469511 CD300LFQ8TDQ1 290 aa3.8□□□□□ -1.8
PTPN4-209ENST00000469511 TSEN15Q8WW01 171 aaKnown RBP3.8□□□□□ -1.8
PTPN4-209ENST00000469511 SRSF12Q8WXF0 261 aaKnown RBP3.8□□□□□ -1.8
PTPN4-209ENST00000469511 NPIPB3Q92617 1050 aa3.8□□□□□ -1.8
PTPN4-209ENST00000469511 THRSPQ92748 146 aa3.8□□□□□ -1.8
PTPN4-209ENST00000469511 GALMQ96C23 342 aa3.8□□□□□ -1.8
PTPN4-209ENST00000469511 ZNF414Q96IQ9 312 aa3.8□□□□□ -1.8
PTPN4-209ENST00000469511 PHB2Q99623 299 aa3.8□□□□□ -1.8
PTPN4-209ENST00000469511 ZNF184Q99676 751 aaPredicted RBP3.8□□□□□ -1.8
PTPN4-209ENST00000469511 HDHD3Q9BSH5 251 aaPredicted RBP3.8□□□□□ -1.8
PTPN4-209ENST00000469511 FAAP24Q9BTP7 215 aa3.8□□□□□ -1.8
PTPN4-209ENST00000469511 SELENOIQ9C0D9 397 aa3.8□□□□□ -1.8
PTPN4-209ENST00000469511 MFFQ9GZY8 342 aa3.8□□□□□ -1.8
PTPN4-209ENST00000469511 CSTL1Q9H114 145 aa3.8□□□□□ -1.8
PTPN4-209ENST00000469511 KCNK15Q9H427 330 aa3.8□□□□□ -1.8
PTPN4-209ENST00000469511 SEPSECSQ9HD40 501 aaKnown RBP3.8□□□□□ -1.8
PTPN4-209ENST00000469511 SLC35D1Q9NTN3 355 aa3.8□□□□□ -1.8
PTPN4-209ENST00000469511 KCNIP1Q9NZI2 227 aa3.8□□□□□ -1.8
PTPN4-209ENST00000469511 ENOPH1Q9UHY7 261 aa3.8□□□□□ -1.8
PTPN4-209ENST00000469511 IGHV4-28A0A0C4DH34 117 aa3.79□□□□□ -1.8
PTPN4-209ENST00000469511 A0A1W2PPK0 400 aa3.79□□□□□ -1.8
PTPN4-209ENST00000469511 MFSD2BA6NFX1 497 aa3.79□□□□□ -1.8
PTPN4-209ENST00000469511 FAM223BA6NKX1 122 aa3.79□□□□□ -1.8
PTPN4-209ENST00000469511 M0R1X1 148 aa3.79□□□□□ -1.8
PTPN4-209ENST00000469511 ZNF207O43670 478 aaKnown RBP3.79□□□□□ -1.8
PTPN4-209ENST00000469511 GPX5O75715 221 aa3.79□□□□□ -1.8
PTPN4-209ENST00000469511 MBPP02686 304 aaPredicted RBP3.79□□□□□ -1.8
PTPN4-209ENST00000469511 GIG44P09565 113 aaPredicted RBP3.79□□□□□ -1.8
PTPN4-209ENST00000469511 SCTP09683 121 aa3.79□□□□□ -1.8
PTPN4-209ENST00000469511 CD3GP09693 182 aa3.79□□□□□ -1.8
PTPN4-209ENST00000469511 T-ENOLP0DO92 83 aa3.79□□□□□ -1.8
PTPN4-209ENST00000469511 MGMTP16455 207 aa3.79□□□□□ -1.8
PTPN4-209ENST00000469511 IGFBP3P17936 291 aaPredicted RBP3.79□□□□□ -1.8
PTPN4-209ENST00000469511 FUT3P21217 361 aa3.79□□□□□ -1.8
PTPN4-209ENST00000469511 CEACAM6P40199 344 aa3.79□□□□□ -1.8
PTPN4-209ENST00000469511 C12orf74Q32Q52 190 aa3.79□□□□□ -1.8
PTPN4-209ENST00000469511 ANKRD55Q3KP44 614 aa3.79□□□□□ -1.8
PTPN4-209ENST00000469511 SLC25A30Q5SVS4 291 aa3.79□□□□□ -1.8
PTPN4-209ENST00000469511 KDM4DQ6B0I6 523 aa3.79□□□□□ -1.8
PTPN4-209ENST00000469511 PVRIGQ6DKI7 326 aa3.79□□□□□ -1.8
PTPN4-209ENST00000469511 DGAT2L7PQ6IED9 249 aa3.79□□□□□ -1.8
PTPN4-209ENST00000469511 ZNF880Q6PDB4 577 aa3.79□□□□□ -1.8
PTPN4-209ENST00000469511 TRAT1Q6PIZ9 186 aa3.79□□□□□ -1.8
PTPN4-209ENST00000469511 RBPMS2Q6ZRY4 209 aaKnown RBP3.79□□□□□ -1.8
PTPN4-209ENST00000469511 C6orf201Q7Z4U5 140 aa3.79□□□□□ -1.8
PTPN4-209ENST00000469511 FAM223AQ8IWN6 122 aa3.79□□□□□ -1.8
PTPN4-209ENST00000469511 TTC9CQ8N5M4 171 aa3.79□□□□□ -1.8
PTPN4-209ENST00000469511 OR4A5Q8NH83 315 aa3.79□□□□□ -1.8
PTPN4-209ENST00000469511 SETD6Q8TBK2 473 aa3.79□□□□□ -1.8
PTPN4-209ENST00000469511 ACOT12Q8WYK0 555 aa3.79□□□□□ -1.8
PTPN4-209ENST00000469511 LGALS12Q96DT0 336 aa3.79□□□□□ -1.8
PTPN4-209ENST00000469511 GALNT14Q96FL9 552 aa3.79□□□□□ -1.8
PTPN4-209ENST00000469511 TMEM68Q96MH6 324 aa3.79□□□□□ -1.8
PTPN4-209ENST00000469511 CIB1Q99828 191 aa3.79□□□□□ -1.8
PTPN4-209ENST00000469511 KRTAP9-9Q9BYP9 154 aa3.79□□□□□ -1.8
PTPN4-209ENST00000469511 KRTAP9-4Q9BYQ2 154 aa3.79□□□□□ -1.8
PTPN4-209ENST00000469511 FAM107BQ9H098 131 aa3.79□□□□□ -1.8
PTPN4-209ENST00000469511 RIBC2Q9H4K1 309 aa3.79□□□□□ -1.8
PTPN4-209ENST00000469511 AMBNQ9NP70 447 aa3.79□□□□□ -1.8
PTPN4-209ENST00000469511 IGKV3-7A0A075B6H7 116 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms