RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 IGHV3-72A0A0B4J1Y9 119 aa12.81□□□□□ -0.36
LIMS2-213ENST00000469300 PF4V1P10720 104 aa12.81□□□□□ -0.36
LIMS2-213ENST00000469300 ATP6V0CP27449 155 aa12.81□□□□□ -0.36
LIMS2-213ENST00000469300 RTN4RL2Q86UN3 420 aa12.81□□□□□ -0.36
LIMS2-213ENST00000469300 MSRB2Q9Y3D2 182 aa12.81□□□□□ -0.36
LIMS2-213ENST00000469300 NBASA2RRP1 2371 aa12.81□□□□□ -0.36
LIMS2-213ENST00000469300 F12P00748 615 aaPredicted RBP12.81□□□□□ -0.36
LIMS2-213ENST00000469300 FGF8P55075 233 aaPredicted RBP12.81□□□□□ -0.36
LIMS2-213ENST00000469300 ASPHD2Q6ICH7 369 aa12.81□□□□□ -0.36
LIMS2-213ENST00000469300 RBM14Q96PK6 669 aaKnown RBP12.81□□□□□ -0.36
LIMS2-213ENST00000469300 SLC25A17O43808 307 aa12.8□□□□□ -0.36
LIMS2-213ENST00000469300 PPOXP50336 477 aa12.8□□□□□ -0.36
LIMS2-213ENST00000469300 QTRT1Q9BXR0 403 aaKnown RBP12.8□□□□□ -0.36
LIMS2-213ENST00000469300 MARCH11A6NNE9 402 aa12.8□□□□□ -0.36
LIMS2-213ENST00000469300 DEDDO75618 318 aa12.8□□□□□ -0.36
LIMS2-213ENST00000469300 CXCL2P19875 107 aa12.8□□□□□ -0.36
LIMS2-213ENST00000469300 MTURNQ8N3F0 131 aa12.8□□□□□ -0.36
LIMS2-213ENST00000469300 DPM3Q9P2X0 92 aa12.8□□□□□ -0.36
LIMS2-213ENST00000469300 SPRR3Q9UBC9 169 aa12.8□□□□□ -0.36
LIMS2-213ENST00000469300 POLEQ07864 2286 aa12.8□□□□□ -0.36
LIMS2-213ENST00000469300 MFAP4P55083 255 aa12.8□□□□□ -0.36
LIMS2-213ENST00000469300 C16orf82Q7Z2V1 217 aa12.8□□□□□ -0.36
LIMS2-213ENST00000469300 H1FOOQ8IZA3 346 aaPredicted RBP12.8□□□□□ -0.36
LIMS2-213ENST00000469300 WDR31Q8NA23 367 aa12.8□□□□□ -0.36
LIMS2-213ENST00000469300 FAM222BQ8WU58 562 aa12.8□□□□□ -0.36
LIMS2-213ENST00000469300 ZNF837Q96EG3 531 aaPredicted RBP12.8□□□□□ -0.36
LIMS2-213ENST00000469300 SDHCQ99643 169 aaPredicted RBP12.8□□□□□ -0.36
LIMS2-213ENST00000469300 FBLN5Q9UBX5 448 aa12.8□□□□□ -0.36
LIMS2-213ENST00000469300 HLA-DRB5Q30154 266 aa12.79□□□□□ -0.36
LIMS2-213ENST00000469300 OR4A47Q6IF82 309 aa12.79□□□□□ -0.36
LIMS2-213ENST00000469300 PNKDQ8N490 385 aa12.79□□□□□ -0.36
LIMS2-213ENST00000469300 VN1R17PQ8TDU5 208 aa12.79□□□□□ -0.36
LIMS2-213ENST00000469300 FAM168AQ92567 244 aa12.79□□□□□ -0.36
LIMS2-213ENST00000469300 ZNF124Q15973 351 aa12.79□□□□□ -0.36
LIMS2-213ENST00000469300 LDLRAD3Q86YD5 345 aa12.79□□□□□ -0.36
LIMS2-213ENST00000469300 RGP1Q92546 391 aaPredicted RBP12.79□□□□□ -0.36
LIMS2-213ENST00000469300 RTN4RQ9BZR6 473 aa12.79□□□□□ -0.36
LIMS2-213ENST00000469300 KCNAB3O43448 404 aa12.79□□□□□ -0.36
LIMS2-213ENST00000469300 CCL1P22362 96 aa12.79□□□□□ -0.36
LIMS2-213ENST00000469300 RPL30P62888 115 aaKnown RBP12.79□□□□□ -0.36
LIMS2-213ENST00000469300 Q1RN00 199 aa12.79□□□□□ -0.36
LIMS2-213ENST00000469300 RPEL1Q2QD12 228 aa12.79□□□□□ -0.36
LIMS2-213ENST00000469300 ZNRF1Q8ND25 227 aa12.79□□□□□ -0.36
LIMS2-213ENST00000469300 OSR1Q8TAX0 266 aaPredicted RBP12.79□□□□□ -0.36
LIMS2-213ENST00000469300 GPR146Q96CH1 333 aa12.79□□□□□ -0.36
LIMS2-213ENST00000469300 PLSCR4Q9NRQ2 329 aa12.79□□□□□ -0.36
LIMS2-213ENST00000469300 CBLN4Q9NTU7 201 aa12.79□□□□□ -0.36
LIMS2-213ENST00000469300 RABAC1Q9UI14 185 aa12.79□□□□□ -0.36
LIMS2-213ENST00000469300 PINLYPA6NC86 204 aa12.79□□□□□ -0.36
LIMS2-213ENST00000469300 OR5AL1P0C617 328 aa12.79□□□□□ -0.36
LIMS2-213ENST00000469300 PGA5P0DJD9 388 aa12.79□□□□□ -0.36
LIMS2-213ENST00000469300 RAB9AP51151 201 aa12.79□□□□□ -0.36
LIMS2-213ENST00000469300 TMEM255AQ5JRV8 349 aa12.79□□□□□ -0.36
LIMS2-213ENST00000469300 ZNF660Q6AZW8 331 aaPredicted RBP12.79□□□□□ -0.36
LIMS2-213ENST00000469300 OR10G8Q8NGN5 311 aa12.79□□□□□ -0.36
LIMS2-213ENST00000469300 WBP1Q96G27 269 aa12.79□□□□□ -0.36
LIMS2-213ENST00000469300 SSBP3Q9BWW4 388 aaPredicted RBP12.79□□□□□ -0.36
LIMS2-213ENST00000469300 TMEM8BA6NDV4 472 aa12.78□□□□□ -0.36
LIMS2-213ENST00000469300 SELENOHQ8IZQ5 122 aaKnown RBP12.78□□□□□ -0.36
LIMS2-213ENST00000469300 MDS2Q8NDY4 140 aa12.78□□□□□ -0.36
LIMS2-213ENST00000469300 ZNF430Q9H8G1 570 aaPredicted RBP12.78□□□□□ -0.36
LIMS2-213ENST00000469300 PLSCR2Q9NRY7 297 aa12.78□□□□□ -0.36
LIMS2-213ENST00000469300 CACNA1DQ01668 2161 aa12.78□□□□□ -0.36
LIMS2-213ENST00000469300 DRAM1Q8N682 238 aa12.78□□□□□ -0.36
LIMS2-213ENST00000469300 GGACTQ9BVM4 153 aa12.78□□□□□ -0.36
LIMS2-213ENST00000469300 LINC00587B1AMM8 73 aa12.78□□□□□ -0.36
LIMS2-213ENST00000469300 HIST3H3Q16695 136 aa12.78□□□□□ -0.36
LIMS2-213ENST00000469300 TMEM97Q5BJF2 176 aa12.78□□□□□ -0.36
LIMS2-213ENST00000469300 GLRX5Q86SX6 157 aa12.78□□□□□ -0.36
LIMS2-213ENST00000469300 TUBD1Q9UJT1 453 aa12.78□□□□□ -0.36
LIMS2-213ENST00000469300 MDC1Q14676 2089 aaKnown RBP12.78□□□□□ -0.36
LIMS2-213ENST00000469300 OR2T8A6NH00 312 aa12.78□□□□□ -0.36
LIMS2-213ENST00000469300 FAM157CP0CG43 387 aa12.78□□□□□ -0.36
LIMS2-213ENST00000469300 FAM3BP58499 235 aaPredicted RBP12.78□□□□□ -0.36
LIMS2-213ENST00000469300 UNQ6494/PRO21346Q6UXR6 183 aa12.78□□□□□ -0.36
LIMS2-213ENST00000469300 GTF3AQ92664 365 aaKnown RBP12.78□□□□□ -0.36
LIMS2-213ENST00000469300 METTL26Q96S19 204 aa12.78□□□□□ -0.36
LIMS2-213ENST00000469300 PAXXQ9BUH6 204 aa12.78□□□□□ -0.36
LIMS2-213ENST00000469300 LINC00312Q9Y6C7 94 aa12.78□□□□□ -0.36
LIMS2-213ENST00000469300 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.77□□□□□ -0.36
LIMS2-213ENST00000469300 F5H697 171 aa12.77□□□□□ -0.36
LIMS2-213ENST00000469300 TNFRSF9Q07011 255 aa12.77□□□□□ -0.36
LIMS2-213ENST00000469300 UNC119Q13432 240 aa12.77□□□□□ -0.36
LIMS2-213ENST00000469300 PQLC2Q6ZP29 291 aa12.77□□□□□ -0.36
LIMS2-213ENST00000469300 Q6ZS92 163 aa12.77□□□□□ -0.36
LIMS2-213ENST00000469300 M0R2Z0 102 aa12.77□□□□□ -0.36
LIMS2-213ENST00000469300 WNT9BO14905 357 aa12.77□□□□□ -0.36
LIMS2-213ENST00000469300 FAM106AQ4KMX7 169 aa12.77□□□□□ -0.36
LIMS2-213ENST00000469300 GGNQ86UU5 652 aa12.77□□□□□ -0.36
LIMS2-213ENST00000469300 RBKSQ9H477 322 aa12.77□□□□□ -0.36
LIMS2-213ENST00000469300 C5orf66Q9H5L9 145 aa12.77□□□□□ -0.36
LIMS2-213ENST00000469300 NAGKQ9UJ70 344 aa12.77□□□□□ -0.36
LIMS2-213ENST00000469300 TCF19Q9Y242 345 aa12.77□□□□□ -0.36
LIMS2-213ENST00000469300 PXMP4Q9Y6I8 212 aa12.77□□□□□ -0.36
LIMS2-213ENST00000469300 HELTA6NFD8 242 aa12.77□□□□□ -0.37
LIMS2-213ENST00000469300 C12orf77C9JDV5 145 aa12.77□□□□□ -0.37
LIMS2-213ENST00000469300 IGFBP3P17936 291 aaPredicted RBP12.77□□□□□ -0.37
LIMS2-213ENST00000469300 COL8A1P27658 744 aa12.77□□□□□ -0.37
LIMS2-213ENST00000469300 ZNF146Q15072 292 aa12.77□□□□□ -0.37
LIMS2-213ENST00000469300 SNRNP40Q96DI7 357 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms