RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 CASQ2O14958 399 aaPredicted RBP9.23□□□□□ -0.93
HDAC3-204ENST00000469207 TPPPO94811 219 aa9.23□□□□□ -0.93
HDAC3-204ENST00000469207 SAA1P0DJI8 122 aaPredicted RBP9.23□□□□□ -0.93
HDAC3-204ENST00000469207 FOLR2P14207 255 aa9.23□□□□□ -0.93
HDAC3-204ENST00000469207 RPL30P62888 115 aaKnown RBP9.23□□□□□ -0.93
HDAC3-204ENST00000469207 MRPS15P82914 257 aaKnown RBP9.23□□□□□ -0.93
HDAC3-204ENST00000469207 VMA21Q3ZAQ7 101 aa9.23□□□□□ -0.93
HDAC3-204ENST00000469207 OR2B11Q5JQS5 317 aa9.23□□□□□ -0.93
HDAC3-204ENST00000469207 H1FOOQ8IZA3 346 aaPredicted RBP9.23□□□□□ -0.93
HDAC3-204ENST00000469207 OR10R2Q8NGX6 335 aa9.23□□□□□ -0.93
HDAC3-204ENST00000469207 GINS4Q9BRT9 223 aa9.23□□□□□ -0.93
HDAC3-204ENST00000469207 DCUN1D5Q9BTE7 237 aa9.23□□□□□ -0.93
HDAC3-204ENST00000469207 SCN3BQ9NY72 215 aa9.23□□□□□ -0.93
HDAC3-204ENST00000469207 NKX1-2Q9UD57 310 aaPredicted RBP9.23□□□□□ -0.93
HDAC3-204ENST00000469207 C2orf70A6NJV1 201 aa9.22□□□□□ -0.93
HDAC3-204ENST00000469207 MFNGO00587 321 aa9.22□□□□□ -0.93
HDAC3-204ENST00000469207 FCGR3BO75015 233 aa9.22□□□□□ -0.93
HDAC3-204ENST00000469207 ARL6IP5O75915 188 aa9.22□□□□□ -0.93
HDAC3-204ENST00000469207 RRASP10301 218 aa9.22□□□□□ -0.93
HDAC3-204ENST00000469207 MYOD1P15172 320 aa9.22□□□□□ -0.93
HDAC3-204ENST00000469207 KIR2DS2P43631 304 aa9.22□□□□□ -0.93
HDAC3-204ENST00000469207 CBX3Q13185 183 aa9.22□□□□□ -0.93
HDAC3-204ENST00000469207 C15orf32Q32M92 178 aa9.22□□□□□ -0.93
HDAC3-204ENST00000469207 TTC9CQ8N5M4 171 aa9.22□□□□□ -0.93
HDAC3-204ENST00000469207 GPHA2Q96T91 129 aa9.22□□□□□ -0.93
HDAC3-204ENST00000469207 CCDC90BQ9GZT6 254 aa9.22□□□□□ -0.93
HDAC3-204ENST00000469207 DUSP21Q9H596 190 aa9.22□□□□□ -0.93
HDAC3-204ENST00000469207 SLC2A8Q9NY64 477 aa9.22□□□□□ -0.93
HDAC3-204ENST00000469207 A0A1B0GW64 132 aa9.21□□□□□ -0.94
HDAC3-204ENST00000469207 FAM223BA6NKX1 122 aa9.21□□□□□ -0.94
HDAC3-204ENST00000469207 TEX22C9J3V5 150 aa9.21□□□□□ -0.94
HDAC3-204ENST00000469207 AIREO43918 545 aa9.21□□□□□ -0.94
HDAC3-204ENST00000469207 TUSC2O75896 110 aa9.21□□□□□ -0.94
HDAC3-204ENST00000469207 JTBO76095 146 aa9.21□□□□□ -0.94
HDAC3-204ENST00000469207 NDUFB8O95169 186 aa9.21□□□□□ -0.94
HDAC3-204ENST00000469207 IL6RP08887 468 aaPredicted RBP9.21□□□□□ -0.94
HDAC3-204ENST00000469207 NFYAP23511 347 aaPredicted RBP9.21□□□□□ -0.94
HDAC3-204ENST00000469207 ARFRP1Q13795 201 aa9.21□□□□□ -0.94
HDAC3-204ENST00000469207 FAM223AQ8IWN6 122 aa9.21□□□□□ -0.94
HDAC3-204ENST00000469207 OR2K2Q8NGT1 345 aa9.21□□□□□ -0.94
HDAC3-204ENST00000469207 DYNLRB2Q8TF09 96 aa9.21□□□□□ -0.94
HDAC3-204ENST00000469207 NRG4Q8WWG1 115 aa9.21□□□□□ -0.94
HDAC3-204ENST00000469207 MGLLQ99685 303 aa9.21□□□□□ -0.94
HDAC3-204ENST00000469207 ZC4H2Q9NQZ6 224 aa9.21□□□□□ -0.94
HDAC3-204ENST00000469207 IGKV1D-13A0A0B4J2D9 117 aa9.2□□□□□ -0.94
HDAC3-204ENST00000469207 SMIM30A4D0T7 59 aa9.2□□□□□ -0.94
HDAC3-204ENST00000469207 RGS10O43665 173 aa9.2□□□□□ -0.94
HDAC3-204ENST00000469207 IGLV2-14P01704 120 aa9.2□□□□□ -0.94
HDAC3-204ENST00000469207 IGKV1-13P0DP09 117 aa9.2□□□□□ -0.94
HDAC3-204ENST00000469207 HIST1H1DP16402 221 aaKnown RBP9.2□□□□□ -0.94
HDAC3-204ENST00000469207 CBLN1P23435 193 aa9.2□□□□□ -0.94
HDAC3-204ENST00000469207 AQP4P55087 323 aa9.2□□□□□ -0.94
HDAC3-204ENST00000469207 BRWD1-AS2P59051 145 aa9.2□□□□□ -0.94
HDAC3-204ENST00000469207 MLLT11Q13015 90 aaPredicted RBP9.2□□□□□ -0.94
HDAC3-204ENST00000469207 CDK10Q15131 360 aa9.2□□□□□ -0.94
HDAC3-204ENST00000469207 CLEC19AQ6UXS0 136 aa9.2□□□□□ -0.94
HDAC3-204ENST00000469207 NR2C2APQ86WQ0 139 aa9.2□□□□□ -0.94
HDAC3-204ENST00000469207 NECAP1Q8NC96 275 aa9.2□□□□□ -0.94
HDAC3-204ENST00000469207 OSR1Q8TAX0 266 aaPredicted RBP9.2□□□□□ -0.94
HDAC3-204ENST00000469207 KCTD12Q96CX2 325 aaKnown RBP9.2□□□□□ -0.94
HDAC3-204ENST00000469207 ADTRPQ96IZ2 230 aa9.2□□□□□ -0.94
HDAC3-204ENST00000469207 FYTTD1Q96QD9 318 aaKnown RBP9.2□□□□□ -0.94
HDAC3-204ENST00000469207 ST6GALNAC5Q9BVH7 336 aa9.2□□□□□ -0.94
HDAC3-204ENST00000469207 FBXL7Q9UJT9 491 aa9.2□□□□□ -0.94
HDAC3-204ENST00000469207 TPRKBQ9Y3C4 175 aa9.2□□□□□ -0.94
HDAC3-204ENST00000469207 FRAS1Q86XX4 4008 aa9.2□□□□□ -0.94
HDAC3-204ENST00000469207 IFITM5A6NNB3 132 aa9.19□□□□□ -0.94
HDAC3-204ENST00000469207 GGCTO75223 188 aaKnown RBP9.19□□□□□ -0.94
HDAC3-204ENST00000469207 ACTL6BO94805 426 aa9.19□□□□□ -0.94
HDAC3-204ENST00000469207 SCAF4O95104 1147 aaKnown RBP9.19□□□□□ -0.94
HDAC3-204ENST00000469207 REG1AP05451 166 aa9.19□□□□□ -0.94
HDAC3-204ENST00000469207 TALDO1P37837 337 aa9.19□□□□□ -0.94
HDAC3-204ENST00000469207 EWSR1Q01844 656 aaKnown RBP eCLIP9.19□□□□□ -0.94
HDAC3-204ENST00000469207 TRAM1Q15629 374 aa9.19□□□□□ -0.94
HDAC3-204ENST00000469207 SSX1Q16384 188 aa9.19□□□□□ -0.94
HDAC3-204ENST00000469207 CDNFQ49AH0 187 aa9.19□□□□□ -0.94
HDAC3-204ENST00000469207 MMD2Q8IY49 270 aa9.19□□□□□ -0.94
HDAC3-204ENST00000469207 TMEM61Q8N0U2 210 aa9.19□□□□□ -0.94
HDAC3-204ENST00000469207 IL17DQ8TAD2 202 aa9.19□□□□□ -0.94
HDAC3-204ENST00000469207 CCDC140Q96MF4 163 aa9.19□□□□□ -0.94
HDAC3-204ENST00000469207 FANCD2OSQ96PS1 177 aa9.19□□□□□ -0.94
HDAC3-204ENST00000469207 SPIN2AQ99865 258 aa9.19□□□□□ -0.94
HDAC3-204ENST00000469207 SPIN2BQ9BPZ2 258 aa9.19□□□□□ -0.94
HDAC3-204ENST00000469207 OVOL2Q9BRP0 275 aa9.19□□□□□ -0.94
HDAC3-204ENST00000469207 OR51E2Q9H255 320 aa9.19□□□□□ -0.94
HDAC3-204ENST00000469207 MLXQ9UH92 298 aa9.19□□□□□ -0.94
HDAC3-204ENST00000469207 SPATA2Q9UM82 520 aa9.19□□□□□ -0.94
HDAC3-204ENST00000469207 KMT2AQ03164 3969 aa9.18□□□□□ -0.94
HDAC3-204ENST00000469207 ZNF320A2RRD8 509 aa9.18□□□□□ -0.94
HDAC3-204ENST00000469207 TMEM213A2RRL7 107 aa9.18□□□□□ -0.94
HDAC3-204ENST00000469207 AREGP15514 252 aa9.18□□□□□ -0.94
HDAC3-204ENST00000469207 GADD45AP24522 165 aa9.18□□□□□ -0.94
HDAC3-204ENST00000469207 PSMA1P25786 263 aaKnown RBP9.18□□□□□ -0.94
HDAC3-204ENST00000469207 ARL3P36405 182 aa9.18□□□□□ -0.94
HDAC3-204ENST00000469207 PSMD7P51665 324 aa9.18□□□□□ -0.94
HDAC3-204ENST00000469207 TM4SF20Q53R12 229 aa9.18□□□□□ -0.94
HDAC3-204ENST00000469207 KCTD9Q7L273 389 aa9.18□□□□□ -0.94
HDAC3-204ENST00000469207 SSX9Q7RTT3 188 aa9.18□□□□□ -0.94
HDAC3-204ENST00000469207 LAX1Q8IWV1 398 aa9.18□□□□□ -0.94
HDAC3-204ENST00000469207 ZNF645Q8N7E2 425 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms