RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 BOKQ9UMX3 212 aaPredicted RBP4.1□□□□□ -1.75
SF3B1-207ENST00000468925 ZNF257Q9Y2Q1 563 aa4.1□□□□□ -1.75
SF3B1-207ENST00000468925 YTHDF2Q9Y5A9 579 aaKnown RBP4.1□□□□□ -1.75
SF3B1-207ENST00000468925 PLXND1Q9Y4D7 1925 aa4.09□□□□□ -1.75
SF3B1-207ENST00000468925 TRIOBPQ9H2D6 2365 aa4.09□□□□□ -1.75
SF3B1-207ENST00000468925 TRGV10A0A0A0MS01 117 aa4.09□□□□□ -1.75
SF3B1-207ENST00000468925 A0A0A6YYD4 124 aa4.09□□□□□ -1.75
SF3B1-207ENST00000468925 A0A0J9YY10 115 aa4.09□□□□□ -1.75
SF3B1-207ENST00000468925 KIR2DS1A0A191URI9 304 aa4.09□□□□□ -1.75
SF3B1-207ENST00000468925 A0A1B0GTH9 108 aa4.09□□□□□ -1.75
SF3B1-207ENST00000468925 A0A1B0GX78 115 aa4.09□□□□□ -1.75
SF3B1-207ENST00000468925 A0A1W2PPV9 198 aa4.09□□□□□ -1.75
SF3B1-207ENST00000468925 OR2T8A6NH00 312 aa4.09□□□□□ -1.75
SF3B1-207ENST00000468925 LRRC30A6NM36 301 aa4.09□□□□□ -1.75
SF3B1-207ENST00000468925 NUPR1O60356 82 aa4.09□□□□□ -1.75
SF3B1-207ENST00000468925 SLC16A7O60669 478 aa4.09□□□□□ -1.75
SF3B1-207ENST00000468925 C8orf89P0DMQ9 161 aa4.09□□□□□ -1.75
SF3B1-207ENST00000468925 HIST1H1EP10412 219 aaKnown RBP4.09□□□□□ -1.75
SF3B1-207ENST00000468925 AREGP15514 252 aa4.09□□□□□ -1.75
SF3B1-207ENST00000468925 IGLL1P15814 213 aa4.09□□□□□ -1.75
SF3B1-207ENST00000468925 DRD1P21728 446 aa4.09□□□□□ -1.75
SF3B1-207ENST00000468925 KIR2DS4P43632 304 aa4.09□□□□□ -1.75
SF3B1-207ENST00000468925 ZNF83P51522 516 aa4.09□□□□□ -1.75
SF3B1-207ENST00000468925 NTHL1P78549 312 aa4.09□□□□□ -1.75
SF3B1-207ENST00000468925 TGFBR3Q03167 851 aa4.09□□□□□ -1.75
SF3B1-207ENST00000468925 ELAVL3Q14576 367 aaKnown RBP4.09□□□□□ -1.75
SF3B1-207ENST00000468925 KIR2DS1Q14954 304 aa4.09□□□□□ -1.75
SF3B1-207ENST00000468925 FAM78AQ5JUQ0 283 aa4.09□□□□□ -1.75
SF3B1-207ENST00000468925 TEPPQ6URK8 271 aa4.09□□□□□ -1.75
SF3B1-207ENST00000468925 ZNF562Q6V9R5 426 aa4.09□□□□□ -1.75
SF3B1-207ENST00000468925 RBPMS2Q6ZRY4 209 aaKnown RBP4.09□□□□□ -1.75
SF3B1-207ENST00000468925 Q6ZSR3 168 aa4.09□□□□□ -1.75
SF3B1-207ENST00000468925 ATP5L2Q7Z4Y8 100 aa4.09□□□□□ -1.75
SF3B1-207ENST00000468925 DOLPP1Q86YN1 238 aa4.09□□□□□ -1.75
SF3B1-207ENST00000468925 BPIFA4PQ86YQ2 179 aa4.09□□□□□ -1.75
SF3B1-207ENST00000468925 UBALD2Q8IYN6 164 aa4.09□□□□□ -1.75
SF3B1-207ENST00000468925 ZNF525Q8N782 197 aa4.09□□□□□ -1.75
SF3B1-207ENST00000468925 ZNF645Q8N7E2 425 aa4.09□□□□□ -1.75
SF3B1-207ENST00000468925 TMEM116Q8NCL8 245 aa4.09□□□□□ -1.75
SF3B1-207ENST00000468925 OR52E5Q8NH55 327 aa4.09□□□□□ -1.75
SF3B1-207ENST00000468925 ZPLD1Q8TCW7 415 aa4.09□□□□□ -1.75
SF3B1-207ENST00000468925 ZNF721Q8TF20 911 aa4.09□□□□□ -1.75
SF3B1-207ENST00000468925 TSKUQ8WUA8 353 aa4.09□□□□□ -1.75
SF3B1-207ENST00000468925 BLNKQ8WV28 456 aa4.09□□□□□ -1.75
SF3B1-207ENST00000468925 SCAMP4Q969E2 229 aa4.09□□□□□ -1.75
SF3B1-207ENST00000468925 C1orf147Q96MC9 270 aaPredicted RBP4.09□□□□□ -1.75
SF3B1-207ENST00000468925 CLEC7AQ9BXN2 247 aa4.09□□□□□ -1.75
SF3B1-207ENST00000468925 UBE2ZQ9H832 354 aaPredicted RBP4.09□□□□□ -1.75
SF3B1-207ENST00000468925 GNB4Q9HAV0 340 aa4.09□□□□□ -1.75
SF3B1-207ENST00000468925 ZNF160Q9HCG1 818 aa4.09□□□□□ -1.75
SF3B1-207ENST00000468925 ZNF331Q9NQX6 463 aaPredicted RBP4.09□□□□□ -1.75
SF3B1-207ENST00000468925 ZNF581Q9P0T4 197 aa4.09□□□□□ -1.75
SF3B1-207ENST00000468925 WNT16Q9UBV4 365 aa4.09□□□□□ -1.75
SF3B1-207ENST00000468925 ZNF391Q9UJN7 358 aa4.09□□□□□ -1.75
SF3B1-207ENST00000468925 ERG28Q9UKR5 140 aa4.09□□□□□ -1.75
SF3B1-207ENST00000468925 SOX21Q9Y651 276 aaPredicted RBP4.09□□□□□ -1.75
SF3B1-207ENST00000468925 BPTFQ12830 3046 aa4.09□□□□□ -1.75
SF3B1-207ENST00000468925 RANBP2P49792 3224 aaKnown RBP4.09□□□□□ -1.76
SF3B1-207ENST00000468925 COL4A2P08572 1712 aa4.09□□□□□ -1.76
SF3B1-207ENST00000468925 PAPPA2Q9BXP8 1791 aa4.09□□□□□ -1.76
SF3B1-207ENST00000468925 IGKV1D-42A0A075B6H8 117 aa4.08□□□□□ -1.76
SF3B1-207ENST00000468925 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.08□□□□□ -1.76
SF3B1-207ENST00000468925 A0A0G2JLM5 398 aa4.08□□□□□ -1.76
SF3B1-207ENST00000468925 A0A1W2PPM0 123 aa4.08□□□□□ -1.76
SF3B1-207ENST00000468925 A0A1W2PQF6 199 aa4.08□□□□□ -1.76
SF3B1-207ENST00000468925 A0A1W2PQM1 296 aa4.08□□□□□ -1.76
SF3B1-207ENST00000468925 FEZF1A0PJY2 475 aa4.08□□□□□ -1.76
SF3B1-207ENST00000468925 GRIFINA4D1Z8 144 aa4.08□□□□□ -1.76
SF3B1-207ENST00000468925 FAM231BA6NCW3 169 aa4.08□□□□□ -1.76
SF3B1-207ENST00000468925 OR4C46A6NHA9 309 aa4.08□□□□□ -1.76
SF3B1-207ENST00000468925 SH2D7A6NKC9 451 aaPredicted RBP4.08□□□□□ -1.76
SF3B1-207ENST00000468925 TMEM262E9PQX1 116 aa4.08□□□□□ -1.76
SF3B1-207ENST00000468925 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.08□□□□□ -1.76
SF3B1-207ENST00000468925 M0R2Z0 102 aa4.08□□□□□ -1.76
SF3B1-207ENST00000468925 SYNGR2O43760 224 aa4.08□□□□□ -1.76
SF3B1-207ENST00000468925 CST7O76096 145 aa4.08□□□□□ -1.76
SF3B1-207ENST00000468925 CXorf1O96002 111 aa4.08□□□□□ -1.76
SF3B1-207ENST00000468925 PPYP01298 95 aa4.08□□□□□ -1.76
SF3B1-207ENST00000468925 APCSP02743 223 aa4.08□□□□□ -1.76
SF3B1-207ENST00000468925 TTRP02766 147 aa4.08□□□□□ -1.76
SF3B1-207ENST00000468925 SMIM10L1P0DMW3 83 aa4.08□□□□□ -1.76
SF3B1-207ENST00000468925 COX8AP10176 69 aa4.08□□□□□ -1.76
SF3B1-207ENST00000468925 ZNF17P17021 662 aa4.08□□□□□ -1.76
SF3B1-207ENST00000468925 HTR1DP28221 377 aa4.08□□□□□ -1.76
SF3B1-207ENST00000468925 GPR1P46091 355 aa4.08□□□□□ -1.76
SF3B1-207ENST00000468925 GPR12P47775 334 aa4.08□□□□□ -1.76
SF3B1-207ENST00000468925 COL4A3Q01955 1670 aa4.08□□□□□ -1.76
SF3B1-207ENST00000468925 ID2Q02363 134 aa4.08□□□□□ -1.76
SF3B1-207ENST00000468925 CD69Q07108 199 aa4.08□□□□□ -1.76
SF3B1-207ENST00000468925 SMAGPQ0VAQ4 97 aa4.08□□□□□ -1.76
SF3B1-207ENST00000468925 IL11RAQ14626 422 aa4.08□□□□□ -1.76
SF3B1-207ENST00000468925 ZNF726P1Q15940 193 aa4.08□□□□□ -1.76
SF3B1-207ENST00000468925 PARM1Q6UWI2 310 aa4.08□□□□□ -1.76
SF3B1-207ENST00000468925 SPATA12Q7Z6I5 190 aa4.08□□□□□ -1.76
SF3B1-207ENST00000468925 RTN4RL2Q86UN3 420 aa4.08□□□□□ -1.76
SF3B1-207ENST00000468925 MMD2Q8IY49 270 aa4.08□□□□□ -1.76
SF3B1-207ENST00000468925 BOD1L2Q8IYS8 172 aa4.08□□□□□ -1.76
SF3B1-207ENST00000468925 SAXO1Q8IYX7 474 aa4.08□□□□□ -1.76
SF3B1-207ENST00000468925 KMT2EQ8IZD2 1858 aa4.08□□□□□ -1.76
SF3B1-207ENST00000468925 OR5AS1Q8N127 324 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms