RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 ZNF66Q6ZN08 573 aa13.16□□□□□ -0.3
TSPAN4-211ENST00000468468 TMEM183AQ8IXX5 376 aa13.16□□□□□ -0.3
TSPAN4-211ENST00000468468 TCTEX1D1Q8N7M0 179 aa13.16□□□□□ -0.3
TSPAN4-211ENST00000468468 FZR1Q9UM11 496 aa13.16□□□□□ -0.3
TSPAN4-211ENST00000468468 PPP5D1E7EU14 171 aa13.16□□□□□ -0.3
TSPAN4-211ENST00000468468 GYPAP02724 150 aa13.16□□□□□ -0.3
TSPAN4-211ENST00000468468 VWC2Q2TAL6 325 aa13.16□□□□□ -0.3
TSPAN4-211ENST00000468468 WDR82Q6UXN9 313 aa13.16□□□□□ -0.3
TSPAN4-211ENST00000468468 NEIL1Q96FI4 390 aaPredicted RBP13.16□□□□□ -0.3
TSPAN4-211ENST00000468468 TRIB1Q96RU8 372 aa13.16□□□□□ -0.3
TSPAN4-211ENST00000468468 PCGF1Q9BSM1 259 aa13.16□□□□□ -0.3
TSPAN4-211ENST00000468468 C17orf112F2Z3M2 114 aa13.15□□□□□ -0.3
TSPAN4-211ENST00000468468 GNB2P62879 340 aa13.15□□□□□ -0.3
TSPAN4-211ENST00000468468 DNLZQ5SXM8 178 aa13.15□□□□□ -0.3
TSPAN4-211ENST00000468468 TGIF2LYQ8IUE0 185 aa13.15□□□□□ -0.3
TSPAN4-211ENST00000468468 CNEP1R1Q8N9A8 125 aa13.15□□□□□ -0.3
TSPAN4-211ENST00000468468 PRR7Q8TB68 274 aa13.15□□□□□ -0.3
TSPAN4-211ENST00000468468 TIMM8AO60220 97 aaPredicted RBP13.15□□□□□ -0.3
TSPAN4-211ENST00000468468 LTC4SQ16873 150 aa13.15□□□□□ -0.3
TSPAN4-211ENST00000468468 DEFB109BQ30KR1 87 aa13.15□□□□□ -0.3
TSPAN4-211ENST00000468468 Q6ZT83 130 aa13.15□□□□□ -0.3
TSPAN4-211ENST00000468468 FAM214BQ7L5A3 538 aa13.15□□□□□ -0.3
TSPAN4-211ENST00000468468 HSD17B10Q99714 261 aaKnown RBP13.15□□□□□ -0.3
TSPAN4-211ENST00000468468 QTRT1Q9BXR0 403 aaKnown RBP13.15□□□□□ -0.3
TSPAN4-211ENST00000468468 MSL2Q9HCI7 577 aa13.15□□□□□ -0.3
TSPAN4-211ENST00000468468 CLCF1Q9UBD9 225 aa13.15□□□□□ -0.3
TSPAN4-211ENST00000468468 DOCK11Q5JSL3 2073 aa13.15□□□□□ -0.3
TSPAN4-211ENST00000468468 A0A1W2PPQ1 181 aa13.15□□□□□ -0.31
TSPAN4-211ENST00000468468 HRASP01112 189 aa13.15□□□□□ -0.31
TSPAN4-211ENST00000468468 CDC34P49427 236 aaPredicted RBP13.15□□□□□ -0.31
TSPAN4-211ENST00000468468 FABP6P51161 128 aa13.15□□□□□ -0.31
TSPAN4-211ENST00000468468 ACOT6Q3I5F7 207 aaPredicted RBP13.15□□□□□ -0.31
TSPAN4-211ENST00000468468 PRSS33Q8NF86 280 aa13.15□□□□□ -0.31
TSPAN4-211ENST00000468468 OR5T1Q8NG75 326 aa13.15□□□□□ -0.31
TSPAN4-211ENST00000468468 ANAPC16Q96DE5 110 aa13.15□□□□□ -0.31
TSPAN4-211ENST00000468468 DCTN5Q9BTE1 182 aa13.15□□□□□ -0.31
TSPAN4-211ENST00000468468 BOD1L1Q8NFC6 3051 aa13.15□□□□□ -0.31
TSPAN4-211ENST00000468468 ZNF292O60281 2723 aa13.14□□□□□ -0.31
TSPAN4-211ENST00000468468 RIF1Q5UIP0 2472 aaKnown RBP13.14□□□□□ -0.31
TSPAN4-211ENST00000468468 RAB4AP20338 218 aa13.14□□□□□ -0.31
TSPAN4-211ENST00000468468 HOXC12P31275 282 aa13.14□□□□□ -0.31
TSPAN4-211ENST00000468468 OR1P1Q8NH06 330 aa13.14□□□□□ -0.31
TSPAN4-211ENST00000468468 R3HDM4Q96D70 268 aa13.14□□□□□ -0.31
TSPAN4-211ENST00000468468 USF3Q68DE3 2245 aa13.14□□□□□ -0.31
TSPAN4-211ENST00000468468 C15orf62A8K5M9 175 aa13.14□□□□□ -0.31
TSPAN4-211ENST00000468468 C11orf94C9JXX5 98 aa13.14□□□□□ -0.31
TSPAN4-211ENST00000468468 DLEU1O43261 78 aa13.14□□□□□ -0.31
TSPAN4-211ENST00000468468 JOSD1Q15040 202 aaPredicted RBP13.14□□□□□ -0.31
TSPAN4-211ENST00000468468 LRP11Q86VZ4 500 aa13.14□□□□□ -0.31
TSPAN4-211ENST00000468468 BEND2Q8NDZ0 799 aa13.14□□□□□ -0.31
TSPAN4-211ENST00000468468 NOL4LQ96MY1 436 aaPredicted RBP13.14□□□□□ -0.31
TSPAN4-211ENST00000468468 ZFHX2Q9C0A1 2572 aaPredicted RBP13.14□□□□□ -0.31
TSPAN4-211ENST00000468468 CACNA1DQ01668 2161 aa13.13□□□□□ -0.31
TSPAN4-211ENST00000468468 XKRY2A2RUG3 117 aa13.13□□□□□ -0.31
TSPAN4-211ENST00000468468 ZNF891A8MT65 544 aaPredicted RBP13.13□□□□□ -0.31
TSPAN4-211ENST00000468468 SPINT2O43291 252 aa13.13□□□□□ -0.31
TSPAN4-211ENST00000468468 OR9G9P0C7N8 305 aa13.13□□□□□ -0.31
TSPAN4-211ENST00000468468 NPPCP23582 126 aa13.13□□□□□ -0.31
TSPAN4-211ENST00000468468 FOXF2Q12947 444 aa13.13□□□□□ -0.31
TSPAN4-211ENST00000468468 PLPPR2Q96GM1 343 aa13.13□□□□□ -0.31
TSPAN4-211ENST00000468468 IGKV3-15P01624 115 aa13.13□□□□□ -0.31
TSPAN4-211ENST00000468468 AMBPP02760 352 aa13.13□□□□□ -0.31
TSPAN4-211ENST00000468468 TDGF1P3P51864 188 aa13.13□□□□□ -0.31
TSPAN4-211ENST00000468468 EDDM3AQ14507 147 aa13.13□□□□□ -0.31
TSPAN4-211ENST00000468468 P2RY6Q15077 328 aa13.13□□□□□ -0.31
TSPAN4-211ENST00000468468 SMIM21Q3B7S5 101 aa13.13□□□□□ -0.31
TSPAN4-211ENST00000468468 WDR31Q8NA23 367 aa13.13□□□□□ -0.31
TSPAN4-211ENST00000468468 PTPRBP23467 1997 aa13.13□□□□□ -0.31
TSPAN4-211ENST00000468468 IFNL4K9M1U5 179 aa13.12□□□□□ -0.31
TSPAN4-211ENST00000468468 CD1BP29016 333 aa13.12□□□□□ -0.31
TSPAN4-211ENST00000468468 FAM3BP58499 235 aaPredicted RBP13.12□□□□□ -0.31
TSPAN4-211ENST00000468468 GCSAMLQ5JQS6 135 aa13.12□□□□□ -0.31
TSPAN4-211ENST00000468468 OR2T10Q8NGZ9 312 aa13.12□□□□□ -0.31
TSPAN4-211ENST00000468468 OR6C3Q9NZP0 311 aa13.12□□□□□ -0.31
TSPAN4-211ENST00000468468 TRAV38-1A0A0B4J264 116 aa13.12□□□□□ -0.31
TSPAN4-211ENST00000468468 FCGR3BO75015 233 aa13.12□□□□□ -0.31
TSPAN4-211ENST00000468468 VENTXO95231 258 aa13.12□□□□□ -0.31
TSPAN4-211ENST00000468468 IGHG3P01860 377 aa13.12□□□□□ -0.31
TSPAN4-211ENST00000468468 CRYAAP02489 173 aa13.12□□□□□ -0.31
TSPAN4-211ENST00000468468 OR4A8P0C604 315 aa13.12□□□□□ -0.31
TSPAN4-211ENST00000468468 BMP5P22003 454 aa13.12□□□□□ -0.31
TSPAN4-211ENST00000468468 IGFL2Q6UWQ7 119 aa13.12□□□□□ -0.31
TSPAN4-211ENST00000468468 CD177Q8N6Q3 437 aa13.12□□□□□ -0.31
TSPAN4-211ENST00000468468 Q8N7P7 452 aa13.12□□□□□ -0.31
TSPAN4-211ENST00000468468 WDR83OSQ9Y284 106 aa13.12□□□□□ -0.31
TSPAN4-211ENST00000468468 C15orf65H3BRN8 121 aa13.11□□□□□ -0.31
TSPAN4-211ENST00000468468 ADH4P08319 380 aa13.11□□□□□ -0.31
TSPAN4-211ENST00000468468 EGR1P18146 543 aa13.11□□□□□ -0.31
TSPAN4-211ENST00000468468 GPR12P47775 334 aa13.11□□□□□ -0.31
TSPAN4-211ENST00000468468 EDDM3BP56851 147 aa13.11□□□□□ -0.31
TSPAN4-211ENST00000468468 BPIFB3P59826 476 aa13.11□□□□□ -0.31
TSPAN4-211ENST00000468468 UBE2G2P60604 165 aa13.11□□□□□ -0.31
TSPAN4-211ENST00000468468 VWA1Q6PCB0 445 aa13.11□□□□□ -0.31
TSPAN4-211ENST00000468468 TMEM37Q8WXS4 190 aa13.11□□□□□ -0.31
TSPAN4-211ENST00000468468 DIRC2Q96SL1 478 aa13.11□□□□□ -0.31
TSPAN4-211ENST00000468468 PRR33A8MZF0 331 aa13.11□□□□□ -0.31
TSPAN4-211ENST00000468468 DVL1O14640 695 aa13.11□□□□□ -0.31
TSPAN4-211ENST00000468468 CECR9P0C854 216 aa13.11□□□□□ -0.31
TSPAN4-211ENST00000468468 KITLGP21583 273 aa13.11□□□□□ -0.31
TSPAN4-211ENST00000468468 DUTP33316 252 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms