RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 LINC00205P59089 165 aa6.79□□□□□ -1.32
BRCA1-208ENST00000468300 AVPI1Q5T686 147 aa6.79□□□□□ -1.32
BRCA1-208ENST00000468300 ZNF295-AS1Q8N0V1 137 aa6.79□□□□□ -1.32
BRCA1-208ENST00000468300 DRAM1Q8N682 238 aa6.79□□□□□ -1.32
BRCA1-208ENST00000468300 SRSF8Q9BRL6 282 aaKnown RBP6.79□□□□□ -1.32
BRCA1-208ENST00000468300 OR6C3Q9NZP0 311 aa6.79□□□□□ -1.32
BRCA1-208ENST00000468300 C3orf85A0A1B0GTC6 90 aa6.78□□□□□ -1.32
BRCA1-208ENST00000468300 YPEL1O60688 119 aa6.78□□□□□ -1.32
BRCA1-208ENST00000468300 IGKV1-39P01597 117 aa6.78□□□□□ -1.32
BRCA1-208ENST00000468300 IGKV1D-39P04432 117 aa6.78□□□□□ -1.32
BRCA1-208ENST00000468300 OR8U9P0C7N5 309 aa6.78□□□□□ -1.32
BRCA1-208ENST00000468300 MAS1LP35410 378 aa6.78□□□□□ -1.32
BRCA1-208ENST00000468300 RAB2AP61019 212 aa6.78□□□□□ -1.32
BRCA1-208ENST00000468300 SRSF2Q01130 221 aaKnown RBP6.78□□□□□ -1.32
BRCA1-208ENST00000468300 C9orf62Q8N4C0 152 aa6.78□□□□□ -1.32
BRCA1-208ENST00000468300 OR8U1Q8NH10 309 aa6.78□□□□□ -1.32
BRCA1-208ENST00000468300 LEAP2Q969E1 77 aa6.78□□□□□ -1.32
BRCA1-208ENST00000468300 YPEL2Q96QA6 119 aa6.78□□□□□ -1.32
BRCA1-208ENST00000468300 TMEM222Q9H0R3 208 aa6.78□□□□□ -1.32
BRCA1-208ENST00000468300 CLEC4MQ9H2X3 399 aaPredicted RBP6.78□□□□□ -1.32
BRCA1-208ENST00000468300 RAB18Q9NP72 206 aa6.78□□□□□ -1.32
BRCA1-208ENST00000468300 OR2S2Q9NQN1 319 aa6.78□□□□□ -1.32
BRCA1-208ENST00000468300 LINC00312Q9Y6C7 94 aa6.78□□□□□ -1.32
BRCA1-208ENST00000468300 LINC00862A6NCI5 91 aa6.78□□□□□ -1.32
BRCA1-208ENST00000468300 NKX6-3A6NJ46 265 aa6.78□□□□□ -1.32
BRCA1-208ENST00000468300 F8WDY8 70 aa6.78□□□□□ -1.32
BRCA1-208ENST00000468300 IFNA10P01566 189 aa6.78□□□□□ -1.32
BRCA1-208ENST00000468300 CCL3L1P16619 93 aa6.78□□□□□ -1.32
BRCA1-208ENST00000468300 IL2RGP31785 369 aa6.78□□□□□ -1.32
BRCA1-208ENST00000468300 RPL30P62888 115 aaKnown RBP6.78□□□□□ -1.32
BRCA1-208ENST00000468300 CLINT1Q14677 625 aa6.78□□□□□ -1.32
BRCA1-208ENST00000468300 ZNF585BQ52M93 769 aa6.78□□□□□ -1.32
BRCA1-208ENST00000468300 SGPP2Q8IWX5 399 aa6.78□□□□□ -1.32
BRCA1-208ENST00000468300 ZNF645Q8N7E2 425 aa6.78□□□□□ -1.32
BRCA1-208ENST00000468300 OR2T35Q8NGX2 323 aa6.78□□□□□ -1.32
BRCA1-208ENST00000468300 SAT2Q96F10 170 aaPredicted RBP6.78□□□□□ -1.32
BRCA1-208ENST00000468300 SEC22AQ96IW7 307 aa6.78□□□□□ -1.32
BRCA1-208ENST00000468300 TMEM56Q96MV1 263 aa6.78□□□□□ -1.32
BRCA1-208ENST00000468300 IFI27L2Q9H2X8 130 aa6.78□□□□□ -1.32
BRCA1-208ENST00000468300 JPT1Q9UK76 154 aa6.78□□□□□ -1.32
BRCA1-208ENST00000468300 UBE2J1Q9Y385 318 aaPredicted RBP6.78□□□□□ -1.32
BRCA1-208ENST00000468300 TMEM56-RWDD3S4R434 201 aa6.78□□□□□ -1.32
BRCA1-208ENST00000468300 TSTD3H0UI37 97 aa6.77□□□□□ -1.33
BRCA1-208ENST00000468300 M0QXV9 152 aa6.77□□□□□ -1.33
BRCA1-208ENST00000468300 IGHV3-7P01780 117 aa6.77□□□□□ -1.33
BRCA1-208ENST00000468300 RAP2BP61225 183 aa6.77□□□□□ -1.33
BRCA1-208ENST00000468300 MEF2CQ06413 473 aaPredicted RBP6.77□□□□□ -1.33
BRCA1-208ENST00000468300 RAB31Q13636 194 aa6.77□□□□□ -1.33
BRCA1-208ENST00000468300 LTC4SQ16873 150 aa6.77□□□□□ -1.33
BRCA1-208ENST00000468300 C5orf64Q2M2E5 130 aa6.77□□□□□ -1.33
BRCA1-208ENST00000468300 PDLIM3Q53GG5 364 aaPredicted RBP6.77□□□□□ -1.33
BRCA1-208ENST00000468300 TMEM177Q53S58 311 aa6.77□□□□□ -1.33
BRCA1-208ENST00000468300 CT45A1Q5HYN5 189 aa6.77□□□□□ -1.33
BRCA1-208ENST00000468300 LIAT1Q6ZQX7 453 aa6.77□□□□□ -1.33
BRCA1-208ENST00000468300 LYZL2Q7Z4W2 148 aa6.77□□□□□ -1.33
BRCA1-208ENST00000468300 CT45A3Q8NHU0 189 aa6.77□□□□□ -1.33
BRCA1-208ENST00000468300 RNF150Q9ULK6 438 aa6.77□□□□□ -1.33
BRCA1-208ENST00000468300 SPINT2O43291 252 aa6.77□□□□□ -1.33
BRCA1-208ENST00000468300 CDS2O95674 445 aa6.77□□□□□ -1.33
BRCA1-208ENST00000468300 NBEAP1P0C6P0 100 aa6.77□□□□□ -1.33
BRCA1-208ENST00000468300 PLA2G2AP14555 144 aa6.77□□□□□ -1.33
BRCA1-208ENST00000468300 AREGP15514 252 aa6.77□□□□□ -1.33
BRCA1-208ENST00000468300 F2RP25116 425 aa6.77□□□□□ -1.33
BRCA1-208ENST00000468300 SNRPEP62304 92 aaKnown RBP6.77□□□□□ -1.33
BRCA1-208ENST00000468300 LGALSLQ3ZCW2 172 aaPredicted RBP6.77□□□□□ -1.33
BRCA1-208ENST00000468300 ABCA11PQ4W5N1 156 aa6.77□□□□□ -1.33
BRCA1-208ENST00000468300 ATRAIDQ6UW56 229 aa6.77□□□□□ -1.33
BRCA1-208ENST00000468300 FAM219AQ8IW50 185 aa6.77□□□□□ -1.33
BRCA1-208ENST00000468300 ABHD14BQ96IU4 210 aa6.77□□□□□ -1.33
BRCA1-208ENST00000468300 OR2D2Q9H210 308 aa6.77□□□□□ -1.33
BRCA1-208ENST00000468300 ZNRD1Q9P1U0 126 aa6.77□□□□□ -1.33
BRCA1-208ENST00000468300 RBM7Q9Y580 266 aaKnown RBP6.77□□□□□ -1.33
BRCA1-208ENST00000468300 TRGV10A0A0A0MS01 117 aa6.77□□□□□ -1.33
BRCA1-208ENST00000468300 LINC00473A8K010 186 aa6.77□□□□□ -1.33
BRCA1-208ENST00000468300 PHF1O43189 567 aaPredicted RBP6.77□□□□□ -1.33
BRCA1-208ENST00000468300 IGHV4-39P01824 125 aa6.77□□□□□ -1.33
BRCA1-208ENST00000468300 ARG1P05089 322 aa6.77□□□□□ -1.33
BRCA1-208ENST00000468300 RPL31P62899 125 aaKnown RBP6.77□□□□□ -1.33
BRCA1-208ENST00000468300 ZNF616Q08AN1 781 aa6.77□□□□□ -1.33
BRCA1-208ENST00000468300 TMEM249Q2WGJ8 235 aa6.77□□□□□ -1.33
BRCA1-208ENST00000468300 TMEM155Q4W5P6 130 aa6.77□□□□□ -1.33
BRCA1-208ENST00000468300 LEMD1Q68G75 181 aa6.77□□□□□ -1.33
BRCA1-208ENST00000468300 C19orf35Q6ZS72 473 aa6.77□□□□□ -1.33
BRCA1-208ENST00000468300 RBPMSQ93062 196 aaKnown RBP6.77□□□□□ -1.33
BRCA1-208ENST00000468300 AKR1E2Q96JD6 320 aa6.77□□□□□ -1.33
BRCA1-208ENST00000468300 IDI2-AS1Q9NZ38 188 aa6.77□□□□□ -1.33
BRCA1-208ENST00000468300 PEF1Q9UBV8 284 aaKnown RBP6.77□□□□□ -1.33
BRCA1-208ENST00000468300 A0A0G2JRQ6 117 aa6.76□□□□□ -1.33
BRCA1-208ENST00000468300 H0Y980 276 aa6.76□□□□□ -1.33
BRCA1-208ENST00000468300 H0YIZ8 118 aa6.76□□□□□ -1.33
BRCA1-208ENST00000468300 CXCL2P19875 107 aa6.76□□□□□ -1.33
BRCA1-208ENST00000468300 EFNA4P52798 201 aa6.76□□□□□ -1.33
BRCA1-208ENST00000468300 MSMO1Q15800 293 aa6.76□□□□□ -1.33
BRCA1-208ENST00000468300 GGNBP1Q5YKI7 109 aa6.76□□□□□ -1.33
BRCA1-208ENST00000468300 EIF4E3Q8N5X7 224 aaKnown RBP6.76□□□□□ -1.33
BRCA1-208ENST00000468300 SLC35G3Q8N808 338 aa6.76□□□□□ -1.33
BRCA1-208ENST00000468300 TMEM116Q8NCL8 245 aa6.76□□□□□ -1.33
BRCA1-208ENST00000468300 LY6G5BQ8NDX9 201 aa6.76□□□□□ -1.33
BRCA1-208ENST00000468300 OR2D3Q8NGH3 330 aa6.76□□□□□ -1.33
BRCA1-208ENST00000468300 COQ8AQ8NI60 647 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms