RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 BMPR1BO00238 502 aa15.99■□□□□ 0.15
COL9A3-207ENST00000467819 ACTL6BO94805 426 aa15.99■□□□□ 0.15
COL9A3-207ENST00000467819 ZNF45Q02386 682 aa15.99■□□□□ 0.15
COL9A3-207ENST00000467819 OR2B11Q5JQS5 317 aa15.99■□□□□ 0.15
COL9A3-207ENST00000467819 C10orf55Q5SWW7 151 aa15.99■□□□□ 0.15
COL9A3-207ENST00000467819 Q6ZS49 121 aa15.99■□□□□ 0.15
COL9A3-207ENST00000467819 CNBD2Q96M20 576 aa15.99■□□□□ 0.15
COL9A3-207ENST00000467819 CENPOQ9BU64 300 aa15.99■□□□□ 0.15
COL9A3-207ENST00000467819 NDUFB11Q9NX14 153 aa15.99■□□□□ 0.15
COL9A3-207ENST00000467819 ERICH4A6NGS2 130 aa15.98■□□□□ 0.15
COL9A3-207ENST00000467819 FAM223BA6NKX1 122 aa15.98■□□□□ 0.15
COL9A3-207ENST00000467819 FCGR3BO75015 233 aa15.98■□□□□ 0.15
COL9A3-207ENST00000467819 ATP5G2Q06055 141 aa15.98■□□□□ 0.15
COL9A3-207ENST00000467819 CDK10Q15131 360 aa15.98■□□□□ 0.15
COL9A3-207ENST00000467819 C22orf42Q6IC83 251 aa15.98■□□□□ 0.15
COL9A3-207ENST00000467819 KCTD9Q7L273 389 aa15.98■□□□□ 0.15
COL9A3-207ENST00000467819 FAM223AQ8IWN6 122 aa15.98■□□□□ 0.15
COL9A3-207ENST00000467819 ZNF645Q8N7E2 425 aa15.98■□□□□ 0.15
COL9A3-207ENST00000467819 CREBL2O60519 120 aaPredicted RBP15.97■□□□□ 0.15
COL9A3-207ENST00000467819 TUSC2O75896 110 aa15.97■□□□□ 0.15
COL9A3-207ENST00000467819 IFNA6P05013 189 aa15.97■□□□□ 0.15
COL9A3-207ENST00000467819 NFYAP23511 347 aaPredicted RBP15.97■□□□□ 0.15
COL9A3-207ENST00000467819 DTYMKP23919 212 aa15.97■□□□□ 0.15
COL9A3-207ENST00000467819 CDNFQ49AH0 187 aa15.97■□□□□ 0.15
COL9A3-207ENST00000467819 ADAMTSL5Q6ZMM2 481 aa15.97■□□□□ 0.15
COL9A3-207ENST00000467819 NR2C2APQ86WQ0 139 aa15.97■□□□□ 0.15
COL9A3-207ENST00000467819 MMD2Q8IY49 270 aa15.97■□□□□ 0.15
COL9A3-207ENST00000467819 SPIN2AQ99865 258 aa15.97■□□□□ 0.15
COL9A3-207ENST00000467819 SPIN2BQ9BPZ2 258 aa15.97■□□□□ 0.15
COL9A3-207ENST00000467819 ST6GALNAC5Q9BVH7 336 aa15.97■□□□□ 0.15
COL9A3-207ENST00000467819 PLEKHA3Q9HB20 300 aa15.97■□□□□ 0.15
COL9A3-207ENST00000467819 RETNQ9HD89 108 aa15.97■□□□□ 0.15
COL9A3-207ENST00000467819 TRBV9A0A0B4J1U6 114 aa15.96■□□□□ 0.15
COL9A3-207ENST00000467819 TRDV1A0A1B0GX56 115 aa15.96■□□□□ 0.15
COL9A3-207ENST00000467819 OR2J3O76001 311 aa15.96■□□□□ 0.15
COL9A3-207ENST00000467819 CD81P60033 236 aa15.96■□□□□ 0.15
COL9A3-207ENST00000467819 RPL30P62888 115 aaKnown RBP15.96■□□□□ 0.15
COL9A3-207ENST00000467819 OR2K2Q8NGT1 345 aa15.96■□□□□ 0.15
COL9A3-207ENST00000467819 BLOC1S6Q9UL45 172 aa15.96■□□□□ 0.15
COL9A3-207ENST00000467819 PRELID3BQ9Y3B1 194 aa15.96■□□□□ 0.15
COL9A3-207ENST00000467819 AIREO43918 545 aa15.95■□□□□ 0.14
COL9A3-207ENST00000467819 MECP2P51608 486 aaKnown RBP15.95■□□□□ 0.14
COL9A3-207ENST00000467819 ARL6IP1Q15041 203 aa15.95■□□□□ 0.14
COL9A3-207ENST00000467819 CD300EQ496F6 205 aaPredicted RBP15.95■□□□□ 0.14
COL9A3-207ENST00000467819 IZUMO2Q6UXV1 221 aa15.95■□□□□ 0.14
COL9A3-207ENST00000467819 VKORC1L1Q8N0U8 176 aa15.95■□□□□ 0.14
COL9A3-207ENST00000467819 TTC9CQ8N5M4 171 aa15.95■□□□□ 0.14
COL9A3-207ENST00000467819 DYNLRB2Q8TF09 96 aa15.95■□□□□ 0.14
COL9A3-207ENST00000467819 NUDCD2Q8WVJ2 157 aa15.95■□□□□ 0.14
COL9A3-207ENST00000467819 MRPS7Q9Y2R9 242 aaKnown RBP15.95■□□□□ 0.14
COL9A3-207ENST00000467819 RBMX2Q9Y388 322 aaKnown RBP15.95■□□□□ 0.14
COL9A3-207ENST00000467819 OR2W1Q9Y3N9 320 aa15.95■□□□□ 0.14
COL9A3-207ENST00000467819 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.94■□□□□ 0.14
COL9A3-207ENST00000467819 IGKV1D-13A0A0B4J2D9 117 aa15.94■□□□□ 0.14
COL9A3-207ENST00000467819 HMX3A6NHT5 357 aa15.94■□□□□ 0.14
COL9A3-207ENST00000467819 PPP5D1E7EU14 171 aa15.94■□□□□ 0.14
COL9A3-207ENST00000467819 IGKV1-13P0DP09 117 aa15.94■□□□□ 0.14
COL9A3-207ENST00000467819 CD36P16671 472 aa15.94■□□□□ 0.14
COL9A3-207ENST00000467819 C15orf32Q32M92 178 aa15.94■□□□□ 0.14
COL9A3-207ENST00000467819 C19orf35Q6ZS72 473 aa15.94■□□□□ 0.14
COL9A3-207ENST00000467819 NECAP1Q8NC96 275 aa15.94■□□□□ 0.14
COL9A3-207ENST00000467819 FAM110AQ9BQ89 295 aa15.94■□□□□ 0.14
COL9A3-207ENST00000467819 NEURL2Q9BR09 285 aa15.94■□□□□ 0.14
COL9A3-207ENST00000467819 VCX3BQ9H321 246 aa15.94■□□□□ 0.14
COL9A3-207ENST00000467819 CEPT1Q9Y6K0 416 aa15.94■□□□□ 0.14
COL9A3-207ENST00000467819 EPPK1P58107 5090 aaKnown RBP15.94■□□□□ 0.14
COL9A3-207ENST00000467819 TPPPO94811 219 aa15.93■□□□□ 0.14
COL9A3-207ENST00000467819 HLA-AP01891 365 aaKnown RBP15.93■□□□□ 0.14
COL9A3-207ENST00000467819 HLA-DQB1P01920 261 aa15.93■□□□□ 0.14
COL9A3-207ENST00000467819 CTXN2P0C2S0 81 aa15.93■□□□□ 0.14
COL9A3-207ENST00000467819 EDN2P20800 178 aa15.93■□□□□ 0.14
COL9A3-207ENST00000467819 HACD4Q5VWC8 232 aa15.93■□□□□ 0.14
COL9A3-207ENST00000467819 SLC25A42Q86VD7 318 aa15.93■□□□□ 0.14
COL9A3-207ENST00000467819 TCTEX1D2Q8WW35 142 aa15.93■□□□□ 0.14
COL9A3-207ENST00000467819 OR51E2Q9H255 320 aa15.93■□□□□ 0.14
COL9A3-207ENST00000467819 TMEM235A6NFC5 223 aa15.92■□□□□ 0.14
COL9A3-207ENST00000467819 TEX22C9J3V5 150 aa15.92■□□□□ 0.14
COL9A3-207ENST00000467819 IGLV2-14P01704 120 aa15.92■□□□□ 0.14
COL9A3-207ENST00000467819 CD7P09564 240 aa15.92■□□□□ 0.14
COL9A3-207ENST00000467819 HSPA13P48723 471 aa15.92■□□□□ 0.14
COL9A3-207ENST00000467819 KCTD12Q96CX2 325 aaKnown RBP15.92■□□□□ 0.14
COL9A3-207ENST00000467819 FYTTD1Q96QD9 318 aaKnown RBP15.92■□□□□ 0.14
COL9A3-207ENST00000467819 WFDC10AQ9H1F0 79 aa15.92■□□□□ 0.14
COL9A3-207ENST00000467819 SLC2A8Q9NY64 477 aa15.92■□□□□ 0.14
COL9A3-207ENST00000467819 SPATA2Q9UM82 520 aa15.92■□□□□ 0.14
COL9A3-207ENST00000467819 ZNF257Q9Y2Q1 563 aa15.92■□□□□ 0.14
COL9A3-207ENST00000467819 DPPA5A6NC42 116 aa15.91■□□□□ 0.14
COL9A3-207ENST00000467819 ZNF785A8K8V0 405 aa15.91■□□□□ 0.14
COL9A3-207ENST00000467819 SLC22A5O76082 557 aa15.91■□□□□ 0.14
COL9A3-207ENST00000467819 IGHV3-23P01764 117 aa15.91■□□□□ 0.14
COL9A3-207ENST00000467819 GALP22466 123 aa15.91■□□□□ 0.14
COL9A3-207ENST00000467819 RPL27AP46776 148 aaKnown RBP15.91■□□□□ 0.14
COL9A3-207ENST00000467819 GUCA2BQ16661 112 aa15.91■□□□□ 0.14
COL9A3-207ENST00000467819 CNIH2Q6PI25 160 aa15.91■□□□□ 0.14
COL9A3-207ENST00000467819 LAX1Q8IWV1 398 aa15.91■□□□□ 0.14
COL9A3-207ENST00000467819 DEFB125Q8N687 156 aa15.91■□□□□ 0.14
COL9A3-207ENST00000467819 OR4S2Q8NH73 311 aa15.91■□□□□ 0.14
COL9A3-207ENST00000467819 OR2A7Q96R45 310 aa15.91■□□□□ 0.14
COL9A3-207ENST00000467819 DCSTAMPQ9H295 470 aa15.91■□□□□ 0.14
COL9A3-207ENST00000467819 HIPK2Q9H2X6 1198 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms