RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 CXCL3P19876 107 aa7.73□□□□□ -1.17
RTFDC1-205ENST00000466260 CNTFRP26992 372 aa7.73□□□□□ -1.17
RTFDC1-205ENST00000466260 CD1BP29016 333 aa7.73□□□□□ -1.17
RTFDC1-205ENST00000466260 S100A11P31949 105 aa7.73□□□□□ -1.17
RTFDC1-205ENST00000466260 ZNF137PP52743 207 aa7.73□□□□□ -1.17
RTFDC1-205ENST00000466260 OPCMLQ14982 345 aa7.73□□□□□ -1.17
RTFDC1-205ENST00000466260 MMDQ15546 238 aa7.73□□□□□ -1.17
RTFDC1-205ENST00000466260 C2orf68Q2NKX9 166 aa7.73□□□□□ -1.17
RTFDC1-205ENST00000466260 CDNFQ49AH0 187 aa7.73□□□□□ -1.17
RTFDC1-205ENST00000466260 TMEM65Q6PI78 240 aa7.73□□□□□ -1.17
RTFDC1-205ENST00000466260 SLC35E3Q7Z769 313 aa7.73□□□□□ -1.17
RTFDC1-205ENST00000466260 ARRDC1Q8N5I2 433 aa7.73□□□□□ -1.17
RTFDC1-205ENST00000466260 C12orf45Q8N5I9 185 aaPredicted RBP7.73□□□□□ -1.17
RTFDC1-205ENST00000466260 OR5AU1Q8NGC0 362 aa7.73□□□□□ -1.17
RTFDC1-205ENST00000466260 LRRC20Q8TCA0 184 aa7.73□□□□□ -1.17
RTFDC1-205ENST00000466260 NOL4LQ96MY1 436 aaPredicted RBP7.73□□□□□ -1.17
RTFDC1-205ENST00000466260 CITED2Q99967 270 aaPredicted RBP7.73□□□□□ -1.17
RTFDC1-205ENST00000466260 NABP2Q9BQ15 211 aa7.73□□□□□ -1.17
RTFDC1-205ENST00000466260 ST6GALNAC5Q9BVH7 336 aa7.73□□□□□ -1.17
RTFDC1-205ENST00000466260 RDH8Q9NYR8 311 aa7.73□□□□□ -1.17
RTFDC1-205ENST00000466260 PIPOXQ9P0Z9 390 aa7.73□□□□□ -1.17
RTFDC1-205ENST00000466260 RBM7Q9Y580 266 aaKnown RBP7.73□□□□□ -1.17
RTFDC1-205ENST00000466260 IGKV1D-8A0A087WSZ0 117 aa7.72□□□□□ -1.17
RTFDC1-205ENST00000466260 H7C2Y5 167 aa7.72□□□□□ -1.17
RTFDC1-205ENST00000466260 RAB29O14966 203 aa7.72□□□□□ -1.17
RTFDC1-205ENST00000466260 FGF16O43320 207 aa7.72□□□□□ -1.17
RTFDC1-205ENST00000466260 B3GALNT1O75752 331 aa7.72□□□□□ -1.17
RTFDC1-205ENST00000466260 PTHLHP12272 177 aa7.72□□□□□ -1.17
RTFDC1-205ENST00000466260 GPR12P47775 334 aa7.72□□□□□ -1.17
RTFDC1-205ENST00000466260 F2RL1P55085 397 aa7.72□□□□□ -1.17
RTFDC1-205ENST00000466260 TAS2R46P59540 309 aa7.72□□□□□ -1.17
RTFDC1-205ENST00000466260 OR2F1Q13607 317 aa7.72□□□□□ -1.17
RTFDC1-205ENST00000466260 ZNF345Q14585 488 aa7.72□□□□□ -1.17
RTFDC1-205ENST00000466260 KIR2DS1Q14954 304 aa7.72□□□□□ -1.17
RTFDC1-205ENST00000466260 LGALSLQ3ZCW2 172 aaPredicted RBP7.72□□□□□ -1.17
RTFDC1-205ENST00000466260 Q5BKY6 102 aa7.72□□□□□ -1.17
RTFDC1-205ENST00000466260 IDO2Q6ZQW0 420 aa7.72□□□□□ -1.17
RTFDC1-205ENST00000466260 ZNF833PQ6ZTB9 187 aa7.72□□□□□ -1.17
RTFDC1-205ENST00000466260 ZNF329Q86UD4 541 aa7.72□□□□□ -1.17
RTFDC1-205ENST00000466260 SLC51BQ86UW2 128 aa7.72□□□□□ -1.17
RTFDC1-205ENST00000466260 Q8N9W7 124 aa7.72□□□□□ -1.17
RTFDC1-205ENST00000466260 OR51S1Q8NGJ8 323 aa7.72□□□□□ -1.17
RTFDC1-205ENST00000466260 OR4A4PQ8NGN8 299 aa7.72□□□□□ -1.17
RTFDC1-205ENST00000466260 EDARADDQ8WWZ3 215 aa7.72□□□□□ -1.17
RTFDC1-205ENST00000466260 S1PR3Q99500 378 aa7.72□□□□□ -1.17
RTFDC1-205ENST00000466260 PHB2Q99623 299 aa7.72□□□□□ -1.17
RTFDC1-205ENST00000466260 RASL11BQ9BPW5 248 aa7.72□□□□□ -1.17
RTFDC1-205ENST00000466260 WNT10AQ9GZT5 417 aa7.72□□□□□ -1.17
RTFDC1-205ENST00000466260 OR2D2Q9H210 308 aa7.72□□□□□ -1.17
RTFDC1-205ENST00000466260 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.72□□□□□ -1.17
RTFDC1-205ENST00000466260 PFDN2Q9UHV9 154 aa7.72□□□□□ -1.17
RTFDC1-205ENST00000466260 TRRAPQ9Y4A5 3859 aa7.72□□□□□ -1.17
RTFDC1-205ENST00000466260 CMYA5Q8N3K9 4069 aa7.72□□□□□ -1.17
RTFDC1-205ENST00000466260 A0A0B4J2A0 478 aa7.71□□□□□ -1.18
RTFDC1-205ENST00000466260 PIGBOS1A0A0B4J2F0 54 aa7.71□□□□□ -1.18
RTFDC1-205ENST00000466260 PSMB11A5LHX3 300 aa7.71□□□□□ -1.18
RTFDC1-205ENST00000466260 MEIS3P1A6NDR6 274 aa7.71□□□□□ -1.18
RTFDC1-205ENST00000466260 LINC01548A6NM66 108 aa7.71□□□□□ -1.18
RTFDC1-205ENST00000466260 EREGO14944 169 aa7.71□□□□□ -1.18
RTFDC1-205ENST00000466260 CD3DP04234 171 aa7.71□□□□□ -1.18
RTFDC1-205ENST00000466260 OR4E1P0C645 316 aa7.71□□□□□ -1.18
RTFDC1-205ENST00000466260 OR8U9P0C7N5 309 aa7.71□□□□□ -1.18
RTFDC1-205ENST00000466260 PET100P0DJ07 73 aa7.71□□□□□ -1.18
RTFDC1-205ENST00000466260 ANXA7P20073 488 aaKnown RBP7.71□□□□□ -1.18
RTFDC1-205ENST00000466260 LINC00205P59089 165 aa7.71□□□□□ -1.18
RTFDC1-205ENST00000466260 EBI3Q14213 229 aa7.71□□□□□ -1.18
RTFDC1-205ENST00000466260 SURF2Q15527 256 aaPredicted RBP7.71□□□□□ -1.18
RTFDC1-205ENST00000466260 ZNF260Q3ZCT1 412 aa7.71□□□□□ -1.18
RTFDC1-205ENST00000466260 VAX1Q5SQQ9 334 aa7.71□□□□□ -1.18
RTFDC1-205ENST00000466260 FOXRED2Q8IWF2 684 aa7.71□□□□□ -1.18
RTFDC1-205ENST00000466260 Q8N6K4 173 aa7.71□□□□□ -1.18
RTFDC1-205ENST00000466260 BEST4Q8NFU0 473 aa7.71□□□□□ -1.18
RTFDC1-205ENST00000466260 OR4X2Q8NGF9 303 aa7.71□□□□□ -1.18
RTFDC1-205ENST00000466260 OR8U1Q8NH10 309 aa7.71□□□□□ -1.18
RTFDC1-205ENST00000466260 OR10J5Q8NHC4 309 aa7.71□□□□□ -1.18
RTFDC1-205ENST00000466260 SCARB1Q8WTV0 552 aa7.71□□□□□ -1.18
RTFDC1-205ENST00000466260 R3HDM4Q96D70 268 aa7.71□□□□□ -1.18
RTFDC1-205ENST00000466260 PHYHIPLQ96FC7 376 aa7.71□□□□□ -1.18
RTFDC1-205ENST00000466260 RITA1Q96K30 269 aa7.71□□□□□ -1.18
RTFDC1-205ENST00000466260 HSPB9Q9BQS6 159 aa7.71□□□□□ -1.18
RTFDC1-205ENST00000466260 ZNF251Q9BRH9 671 aa7.71□□□□□ -1.18
RTFDC1-205ENST00000466260 CABLES2Q9BTV7 478 aa7.71□□□□□ -1.18
RTFDC1-205ENST00000466260 SHPKQ9UHJ6 478 aa7.71□□□□□ -1.18
RTFDC1-205ENST00000466260 ELOA3CA0A087WX78 387 aaPredicted RBP7.7□□□□□ -1.18
RTFDC1-205ENST00000466260 TCRBV4S1A1TA0A5B7 111 aa7.7□□□□□ -1.18
RTFDC1-205ENST00000466260 ADARB2-AS1A8MUL3 147 aa7.7□□□□□ -1.18
RTFDC1-205ENST00000466260 M0R1X1 148 aa7.7□□□□□ -1.18
RTFDC1-205ENST00000466260 SHOXO15266 292 aa7.7□□□□□ -1.18
RTFDC1-205ENST00000466260 CT45A6P0DMU7 189 aa7.7□□□□□ -1.18
RTFDC1-205ENST00000466260 CT45A5P0DMU8 189 aa7.7□□□□□ -1.18
RTFDC1-205ENST00000466260 CT45A7P0DMV0 189 aa7.7□□□□□ -1.18
RTFDC1-205ENST00000466260 RRASP10301 218 aa7.7□□□□□ -1.18
RTFDC1-205ENST00000466260 SLC25A4P12235 298 aa7.7□□□□□ -1.18
RTFDC1-205ENST00000466260 NAT1P18440 290 aa7.7□□□□□ -1.18
RTFDC1-205ENST00000466260 NUP62P37198 522 aaPredicted RBP7.7□□□□□ -1.18
RTFDC1-205ENST00000466260 EIF5AP63241 154 aaKnown RBP7.7□□□□□ -1.18
RTFDC1-205ENST00000466260 EXOSC2Q13868 293 aaKnown RBP7.7□□□□□ -1.18
RTFDC1-205ENST00000466260 PLGLAQ15195 96 aa7.7□□□□□ -1.18
RTFDC1-205ENST00000466260 LY6G6FQ5SQ64 297 aa7.7□□□□□ -1.18
RTFDC1-205ENST00000466260 LYG2Q86SG7 212 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms