RNA–Protein interactions for RNA: ENST00000465339.5

COL28A1-206, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 3

Gene COL28A1, Length 722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-206ENST00000465339 SLC5A7Q9GZV3 580 aa10.18□□□□□ -0.78
COL28A1-206ENST00000465339 TPSG1Q9NRR2 321 aa10.18□□□□□ -0.78
COL28A1-206ENST00000465339 EHFQ9NZC4 300 aa10.18□□□□□ -0.78
COL28A1-206ENST00000465339 FOXA2Q9Y261 457 aaPredicted RBP10.18□□□□□ -0.78
COL28A1-206ENST00000465339 A0A1W2PN81 502 aa10.17□□□□□ -0.78
COL28A1-206ENST00000465339 G3V4G9 280 aa10.17□□□□□ -0.78
COL28A1-206ENST00000465339 CREBL2O60519 120 aaPredicted RBP10.17□□□□□ -0.78
COL28A1-206ENST00000465339 NOL3O60936 208 aaKnown RBP10.17□□□□□ -0.78
COL28A1-206ENST00000465339 DUS4LO95620 317 aaKnown RBP10.17□□□□□ -0.78
COL28A1-206ENST00000465339 PMP2P02689 132 aa10.17□□□□□ -0.78
COL28A1-206ENST00000465339 CHRNA7P36544 502 aa10.17□□□□□ -0.78
COL28A1-206ENST00000465339 KIR2DS2P43631 304 aa10.17□□□□□ -0.78
COL28A1-206ENST00000465339 RAB9AP51151 201 aa10.17□□□□□ -0.78
COL28A1-206ENST00000465339 FXYD4P59646 89 aa10.17□□□□□ -0.78
COL28A1-206ENST00000465339 HERV-K104P61576 105 aa10.17□□□□□ -0.78
COL28A1-206ENST00000465339 ACTBL2Q562R1 376 aa10.17□□□□□ -0.78
COL28A1-206ENST00000465339 KPRPQ5T749 579 aaPredicted RBP10.17□□□□□ -0.78
COL28A1-206ENST00000465339 ETV3LQ6ZN32 361 aa10.17□□□□□ -0.78
COL28A1-206ENST00000465339 LINC00482Q8N8I6 264 aa10.17□□□□□ -0.78
COL28A1-206ENST00000465339 ZNF491Q8N8L2 437 aa10.17□□□□□ -0.78
COL28A1-206ENST00000465339 LFNGQ8NES3 379 aa10.17□□□□□ -0.78
COL28A1-206ENST00000465339 OR6F1Q8NGZ6 308 aa10.17□□□□□ -0.78
COL28A1-206ENST00000465339 OR4S2Q8NH73 311 aa10.17□□□□□ -0.78
COL28A1-206ENST00000465339 C4orf3Q8WVX3 66 aa10.17□□□□□ -0.78
COL28A1-206ENST00000465339 TCTEX1D2Q8WW35 142 aa10.17□□□□□ -0.78
COL28A1-206ENST00000465339 RCC1LQ96I51 464 aaKnown RBP10.17□□□□□ -0.78
COL28A1-206ENST00000465339 TMEM68Q96MH6 324 aa10.17□□□□□ -0.78
COL28A1-206ENST00000465339 P2RX4Q99571 388 aa10.17□□□□□ -0.78
COL28A1-206ENST00000465339 AIFM2Q9BRQ8 373 aa10.17□□□□□ -0.78
COL28A1-206ENST00000465339 KLK15Q9H2R5 256 aa10.17□□□□□ -0.78
COL28A1-206ENST00000465339 TAS2R8Q9NYW2 309 aa10.17□□□□□ -0.78
COL28A1-206ENST00000465339 EXTL2Q9UBQ6 330 aa10.17□□□□□ -0.78
COL28A1-206ENST00000465339 SCOCQ9UIL1 159 aa10.17□□□□□ -0.78
COL28A1-206ENST00000465339 A3GALT2U3KPV4 340 aa10.17□□□□□ -0.78
COL28A1-206ENST00000465339 TNCP24821 2201 aa10.17□□□□□ -0.78
COL28A1-206ENST00000465339 CCL24O00175 119 aa10.16□□□□□ -0.78
COL28A1-206ENST00000465339 ARPC1BO15143 372 aaKnown RBP10.16□□□□□ -0.78
COL28A1-206ENST00000465339 HLA-DMAP28067 261 aa10.16□□□□□ -0.78
COL28A1-206ENST00000465339 RCVRNP35243 200 aa10.16□□□□□ -0.78
COL28A1-206ENST00000465339 GNB1P62873 340 aa10.16□□□□□ -0.78
COL28A1-206ENST00000465339 PJVKQ0ZLH3 352 aa10.16□□□□□ -0.78
COL28A1-206ENST00000465339 CATR1Q13166 79 aa10.16□□□□□ -0.78
COL28A1-206ENST00000465339 KIAA0141Q14154 515 aaPredicted RBP10.16□□□□□ -0.78
COL28A1-206ENST00000465339 BEAN1Q3B7T3 259 aa10.16□□□□□ -0.78
COL28A1-206ENST00000465339 C1QL4Q86Z23 238 aa10.16□□□□□ -0.78
COL28A1-206ENST00000465339 MRPL41Q8IXM3 137 aaKnown RBP10.16□□□□□ -0.78
COL28A1-206ENST00000465339 DYNC2LI1Q8TCX1 351 aa10.16□□□□□ -0.78
COL28A1-206ENST00000465339 RAX2Q96IS3 184 aa10.16□□□□□ -0.78
COL28A1-206ENST00000465339 ZNF2Q9BSG1 426 aaPredicted RBP10.16□□□□□ -0.78
COL28A1-206ENST00000465339 FAM103A1Q9BTL3 118 aaKnown RBP10.16□□□□□ -0.78
COL28A1-206ENST00000465339 VSIG4Q9Y279 399 aa10.16□□□□□ -0.78
COL28A1-206ENST00000465339 CTDSP2O14595 271 aa10.15□□□□□ -0.78
COL28A1-206ENST00000465339 RGS5O15539 181 aa10.15□□□□□ -0.78
COL28A1-206ENST00000465339 RBFOX2O43251 390 aaKnown RBP eCLIP10.15□□□□□ -0.78
COL28A1-206ENST00000465339 TNFSF12O43508 249 aa10.15□□□□□ -0.78
COL28A1-206ENST00000465339 SOX15O60248 233 aa10.15□□□□□ -0.78
COL28A1-206ENST00000465339 HRASP01112 189 aa10.15□□□□□ -0.78
COL28A1-206ENST00000465339 IGLL1P15814 213 aa10.15□□□□□ -0.78
COL28A1-206ENST00000465339 GNRHRP30968 328 aa10.15□□□□□ -0.78
COL28A1-206ENST00000465339 HRH1P35367 487 aa10.15□□□□□ -0.78
COL28A1-206ENST00000465339 BRWD1-AS2P59051 145 aa10.15□□□□□ -0.78
COL28A1-206ENST00000465339 TSPAN5P62079 268 aa10.15□□□□□ -0.78
COL28A1-206ENST00000465339 RUNX1Q01196 453 aa10.15□□□□□ -0.78
COL28A1-206ENST00000465339 PRSS8Q16651 343 aa10.15□□□□□ -0.78
COL28A1-206ENST00000465339 OR2B11Q5JQS5 317 aa10.15□□□□□ -0.78
COL28A1-206ENST00000465339 LPCAT3Q6P1A2 487 aa10.15□□□□□ -0.78
COL28A1-206ENST00000465339 ZNF818PQ6ZRF7 136 aa10.15□□□□□ -0.78
COL28A1-206ENST00000465339 TMEM17Q86X19 198 aa10.15□□□□□ -0.78
COL28A1-206ENST00000465339 GRPEL2Q8TAA5 225 aa10.15□□□□□ -0.78
COL28A1-206ENST00000465339 VSTM2AQ8TAG5 236 aa10.15□□□□□ -0.78
COL28A1-206ENST00000465339 CD300LFQ8TDQ1 290 aa10.15□□□□□ -0.78
COL28A1-206ENST00000465339 FCAMRQ8WWV6 532 aa10.15□□□□□ -0.78
COL28A1-206ENST00000465339 MOB3AQ96BX8 217 aa10.15□□□□□ -0.78
COL28A1-206ENST00000465339 MCRIP2Q9BUT9 160 aaKnown RBP10.15□□□□□ -0.78
COL28A1-206ENST00000465339 GPR61Q9BZJ8 451 aa10.15□□□□□ -0.78
COL28A1-206ENST00000465339 SLA2Q9H6Q3 261 aa10.15□□□□□ -0.78
COL28A1-206ENST00000465339 CCDC59Q9P031 241 aaKnown RBP10.15□□□□□ -0.78
COL28A1-206ENST00000465339 RABL2AQ9UBK7 228 aaPredicted RBP10.15□□□□□ -0.78
COL28A1-206ENST00000465339 RABL2BQ9UNT1 228 aa10.15□□□□□ -0.78
COL28A1-206ENST00000465339 H3BUA1 57 aa10.14□□□□□ -0.79
COL28A1-206ENST00000465339 I3L521 148 aa10.14□□□□□ -0.79
COL28A1-206ENST00000465339 ACTL6BO94805 426 aa10.14□□□□□ -0.79
COL28A1-206ENST00000465339 OR2A4O95047 310 aa10.14□□□□□ -0.79
COL28A1-206ENST00000465339 SAA1P0DJI8 122 aaPredicted RBP10.14□□□□□ -0.79
COL28A1-206ENST00000465339 SSBP2P81877 361 aaPredicted RBP10.14□□□□□ -0.79
COL28A1-206ENST00000465339 TNXAQ16473 311 aa10.14□□□□□ -0.79
COL28A1-206ENST00000465339 MRGPRG-AS1Q2M3A8 158 aa10.14□□□□□ -0.79
COL28A1-206ENST00000465339 MMD2Q8IY49 270 aa10.14□□□□□ -0.79
COL28A1-206ENST00000465339 CMTM1Q8IZ96 169 aa10.14□□□□□ -0.79
COL28A1-206ENST00000465339 SPAG16Q8N0X2 631 aa10.14□□□□□ -0.79
COL28A1-206ENST00000465339 ISOC1Q96CN7 298 aa10.14□□□□□ -0.79
COL28A1-206ENST00000465339 OR2A7Q96R45 310 aa10.14□□□□□ -0.79
COL28A1-206ENST00000465339 ABHD1Q96SE0 405 aa10.14□□□□□ -0.79
COL28A1-206ENST00000465339 GPHA2Q96T91 129 aa10.14□□□□□ -0.79
COL28A1-206ENST00000465339 MIXL1Q9H2W2 232 aa10.14□□□□□ -0.79
COL28A1-206ENST00000465339 ELOA3CA0A087WX78 387 aaPredicted RBP10.13□□□□□ -0.79
COL28A1-206ENST00000465339 MSGN1A6NI15 193 aa10.13□□□□□ -0.79
COL28A1-206ENST00000465339 H3BMQ9 156 aa10.13□□□□□ -0.79
COL28A1-206ENST00000465339 BRI3O95415 125 aa10.13□□□□□ -0.79
COL28A1-206ENST00000465339 HPRT1P00492 218 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms