RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 GLDNQ6ZMI3 551 aaPredicted RBP13.9□□□□□ -0.18
CPSF4-209ENST00000465132 TBC1D26Q86UD7 250 aa13.9□□□□□ -0.18
CPSF4-209ENST00000465132 SPAG16Q8N0X2 631 aa13.9□□□□□ -0.18
CPSF4-209ENST00000465132 CENPSQ8N2Z9 138 aa13.9□□□□□ -0.18
CPSF4-209ENST00000465132 OR51H1Q8NH63 302 aa13.9□□□□□ -0.18
CPSF4-209ENST00000465132 DDB2Q92466 427 aa13.9□□□□□ -0.18
CPSF4-209ENST00000465132 RANBP3Q9H6Z4 567 aaPredicted RBP13.9□□□□□ -0.18
CPSF4-209ENST00000465132 NCBP2LA6PVI3 153 aaKnown RBP13.89□□□□□ -0.19
CPSF4-209ENST00000465132 LINC00473A8K010 186 aa13.89□□□□□ -0.19
CPSF4-209ENST00000465132 NBR2O15453 112 aa13.89□□□□□ -0.19
CPSF4-209ENST00000465132 PLA2G10O15496 165 aa13.89□□□□□ -0.19
CPSF4-209ENST00000465132 SLC6A1P30531 599 aa13.89□□□□□ -0.19
CPSF4-209ENST00000465132 DHODHQ02127 395 aa13.89□□□□□ -0.19
CPSF4-209ENST00000465132 DCTN2Q13561 401 aaKnown RBP13.89□□□□□ -0.19
CPSF4-209ENST00000465132 MMDQ15546 238 aa13.89□□□□□ -0.19
CPSF4-209ENST00000465132 TMEM128Q5BJH2 165 aa13.89□□□□□ -0.19
CPSF4-209ENST00000465132 HARBI1Q96MB7 349 aa13.89□□□□□ -0.19
CPSF4-209ENST00000465132 RASL11BQ9BPW5 248 aa13.89□□□□□ -0.19
CPSF4-209ENST00000465132 PLEKHA2Q9HB19 425 aa13.89□□□□□ -0.19
CPSF4-209ENST00000465132 COMMD9Q9P000 198 aa13.89□□□□□ -0.19
CPSF4-209ENST00000465132 C3orf85A0A1B0GTC6 90 aa13.88□□□□□ -0.19
CPSF4-209ENST00000465132 H0Y980 276 aa13.88□□□□□ -0.19
CPSF4-209ENST00000465132 CRYZL1O95825 349 aa13.88□□□□□ -0.19
CPSF4-209ENST00000465132 CD24P25063 80 aa13.88□□□□□ -0.19
CPSF4-209ENST00000465132 PAX6P26367 422 aa13.88□□□□□ -0.19
CPSF4-209ENST00000465132 ERVK-16P61578 105 aa13.88□□□□□ -0.19
CPSF4-209ENST00000465132 HNF4GQ14541 408 aa13.88□□□□□ -0.19
CPSF4-209ENST00000465132 PLGLAQ15195 96 aa13.88□□□□□ -0.19
CPSF4-209ENST00000465132 TMED4Q7Z7H5 227 aa13.88□□□□□ -0.19
CPSF4-209ENST00000465132 Q8N6K4 173 aa13.88□□□□□ -0.19
CPSF4-209ENST00000465132 NPBQ8NG41 125 aa13.88□□□□□ -0.19
CPSF4-209ENST00000465132 SIGLEC9Q9Y336 463 aa13.88□□□□□ -0.19
CPSF4-209ENST00000465132 TCRBP04435 133 aa13.87□□□□□ -0.19
CPSF4-209ENST00000465132 NQO2P16083 231 aa13.87□□□□□ -0.19
CPSF4-209ENST00000465132 AKR1C4P17516 323 aa13.87□□□□□ -0.19
CPSF4-209ENST00000465132 CCR6P51684 374 aa13.87□□□□□ -0.19
CPSF4-209ENST00000465132 C5orf30Q96GV9 206 aa13.87□□□□□ -0.19
CPSF4-209ENST00000465132 RTBDNQ9BSG5 229 aaPredicted RBP13.87□□□□□ -0.19
CPSF4-209ENST00000465132 PRSS22Q9GZN4 317 aa13.87□□□□□ -0.19
CPSF4-209ENST00000465132 C5orf66Q9H5L9 145 aa13.87□□□□□ -0.19
CPSF4-209ENST00000465132 NAA60Q9H7X0 242 aa13.87□□□□□ -0.19
CPSF4-209ENST00000465132 NUBP2Q9Y5Y2 271 aa13.87□□□□□ -0.19
CPSF4-209ENST00000465132 CRYM-AS1A6NIL9 109 aa13.86□□□□□ -0.19
CPSF4-209ENST00000465132 G3V4G9 280 aa13.86□□□□□ -0.19
CPSF4-209ENST00000465132 PI3P19957 117 aa13.86□□□□□ -0.19
CPSF4-209ENST00000465132 RPL30P62888 115 aaKnown RBP13.86□□□□□ -0.19
CPSF4-209ENST00000465132 BEAN1Q3B7T3 259 aa13.86□□□□□ -0.19
CPSF4-209ENST00000465132 ARSJQ5FYB0 599 aaPredicted RBP13.86□□□□□ -0.19
CPSF4-209ENST00000465132 PLET1Q6UQ28 207 aa13.86□□□□□ -0.19
CPSF4-209ENST00000465132 TMEM219Q86XT9 240 aa13.86□□□□□ -0.19
CPSF4-209ENST00000465132 TEX45Q8NA69 505 aa13.86□□□□□ -0.19
CPSF4-209ENST00000465132 MRGPRFQ96AM1 343 aa13.86□□□□□ -0.19
CPSF4-209ENST00000465132 ALX4Q9H161 411 aaPredicted RBP13.86□□□□□ -0.19
CPSF4-209ENST00000465132 TBC1D24Q9ULP9 559 aa13.86□□□□□ -0.19
CPSF4-209ENST00000465132 VSIG4Q9Y279 399 aa13.86□□□□□ -0.19
CPSF4-209ENST00000465132 TET2Q6N021 2002 aaPredicted RBP13.85□□□□□ -0.19
CPSF4-209ENST00000465132 NDUFA3O95167 84 aa13.85□□□□□ -0.19
CPSF4-209ENST00000465132 PTTG1O95997 202 aa13.85□□□□□ -0.19
CPSF4-209ENST00000465132 OPN1MWP04001 364 aa13.85□□□□□ -0.19
CPSF4-209ENST00000465132 IGKV1-16P04430 117 aa13.85□□□□□ -0.19
CPSF4-209ENST00000465132 OPN1MW2P0DN77 364 aa13.85□□□□□ -0.19
CPSF4-209ENST00000465132 OPN1MW3P0DN78 364 aa13.85□□□□□ -0.19
CPSF4-209ENST00000465132 RAB25P57735 213 aa13.85□□□□□ -0.19
CPSF4-209ENST00000465132 UBE2KP61086 200 aa13.85□□□□□ -0.19
CPSF4-209ENST00000465132 TRIM16LQ309B1 348 aa13.85□□□□□ -0.19
CPSF4-209ENST00000465132 FBLN7Q53RD9 439 aa13.85□□□□□ -0.19
CPSF4-209ENST00000465132 OR2B11Q5JQS5 317 aa13.85□□□□□ -0.19
CPSF4-209ENST00000465132 SLC25A42Q86VD7 318 aa13.85□□□□□ -0.19
CPSF4-209ENST00000465132 CADM3Q8N126 398 aa13.85□□□□□ -0.19
CPSF4-209ENST00000465132 OR4A5Q8NH83 315 aa13.85□□□□□ -0.19
CPSF4-209ENST00000465132 GALNT14Q96FL9 552 aa13.85□□□□□ -0.19
CPSF4-209ENST00000465132 RRHO14718 337 aa13.84□□□□□ -0.19
CPSF4-209ENST00000465132 BTCP35070 178 aa13.84□□□□□ -0.19
CPSF4-209ENST00000465132 LPAR6P43657 344 aa13.84□□□□□ -0.19
CPSF4-209ENST00000465132 C5orf64Q2M2E5 130 aa13.84□□□□□ -0.19
CPSF4-209ENST00000465132 KPRPQ5T749 579 aaPredicted RBP13.84□□□□□ -0.19
CPSF4-209ENST00000465132 HIST2H2BDQ6DRA6 164 aa13.84□□□□□ -0.19
CPSF4-209ENST00000465132 LIN54Q6MZP7 749 aa13.84□□□□□ -0.19
CPSF4-209ENST00000465132 CCBE1Q6UXH8 406 aaPredicted RBP13.84□□□□□ -0.19
CPSF4-209ENST00000465132 KLHDC1Q8N7A1 406 aa13.84□□□□□ -0.19
CPSF4-209ENST00000465132 C11orf44Q8N8P7 122 aa13.84□□□□□ -0.19
CPSF4-209ENST00000465132 DUSP18Q8NEJ0 188 aa13.84□□□□□ -0.19
CPSF4-209ENST00000465132 DMBX1Q8NFW5 382 aa13.84□□□□□ -0.19
CPSF4-209ENST00000465132 OR2T6Q8NHC8 308 aa13.84□□□□□ -0.19
CPSF4-209ENST00000465132 IL22RA2Q969J5 263 aa13.84□□□□□ -0.19
CPSF4-209ENST00000465132 RHOVQ96L33 236 aa13.84□□□□□ -0.19
CPSF4-209ENST00000465132 TMEM222Q9H0R3 208 aa13.84□□□□□ -0.19
CPSF4-209ENST00000465132 C20orf85Q9H1P6 137 aa13.84□□□□□ -0.19
CPSF4-209ENST00000465132 METTL1Q9UBP6 276 aaKnown RBP13.84□□□□□ -0.19
CPSF4-209ENST00000465132 ARPC1BO15143 372 aaKnown RBP13.83□□□□□ -0.2
CPSF4-209ENST00000465132 ACTL6BO94805 426 aa13.83□□□□□ -0.2
CPSF4-209ENST00000465132 OR2A4O95047 310 aa13.83□□□□□ -0.2
CPSF4-209ENST00000465132 FGF2P09038 288 aa13.83□□□□□ -0.2
CPSF4-209ENST00000465132 H2AFB2P0C5Z0 115 aa13.83□□□□□ -0.2
CPSF4-209ENST00000465132 VAMP1P23763 118 aa13.83□□□□□ -0.2
CPSF4-209ENST00000465132 UCP1P25874 307 aa13.83□□□□□ -0.2
CPSF4-209ENST00000465132 IFITM3Q01628 133 aa13.83□□□□□ -0.2
CPSF4-209ENST00000465132 PSG5Q15238 335 aa13.83□□□□□ -0.2
CPSF4-209ENST00000465132 C4orf46Q504U0 113 aa13.83□□□□□ -0.2
CPSF4-209ENST00000465132 SAMD5Q5TGI4 173 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms