RNA–Protein interactions for RNA: ENST00000464263.1

RAB11FIP3-208, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 329 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-208ENST00000464263 RBFOX2O43251 390 aaKnown RBP eCLIP12.07□□□□□ -0.48
RAB11FIP3-208ENST00000464263 RAMP3O60896 148 aa12.07□□□□□ -0.48
RAB11FIP3-208ENST00000464263 IGHG4P01861 327 aa12.07□□□□□ -0.48
RAB11FIP3-208ENST00000464263 OPN1MWP04001 364 aa12.07□□□□□ -0.48
RAB11FIP3-208ENST00000464263 ZNF735P0CB33 412 aa12.07□□□□□ -0.48
RAB11FIP3-208ENST00000464263 OPN1MW2P0DN77 364 aa12.07□□□□□ -0.48
RAB11FIP3-208ENST00000464263 OPN1MW3P0DN78 364 aa12.07□□□□□ -0.48
RAB11FIP3-208ENST00000464263 VDAC1P21796 283 aa12.07□□□□□ -0.48
RAB11FIP3-208ENST00000464263 CATR1Q13166 79 aa12.07□□□□□ -0.48
RAB11FIP3-208ENST00000464263 VMA21Q3ZAQ7 101 aa12.07□□□□□ -0.48
RAB11FIP3-208ENST00000464263 TREML4Q6UXN2 200 aa12.07□□□□□ -0.48
RAB11FIP3-208ENST00000464263 SPAG16Q8N0X2 631 aa12.07□□□□□ -0.48
RAB11FIP3-208ENST00000464263 RNF152Q8N8N0 203 aa12.07□□□□□ -0.48
RAB11FIP3-208ENST00000464263 MINDY2Q8NBR6 621 aa12.07□□□□□ -0.48
RAB11FIP3-208ENST00000464263 OR6Q1Q8NGQ2 317 aa12.07□□□□□ -0.48
RAB11FIP3-208ENST00000464263 VWFP04275 2813 aa12.07□□□□□ -0.48
RAB11FIP3-208ENST00000464263 WNK1Q9H4A3 2382 aa12.06□□□□□ -0.48
RAB11FIP3-208ENST00000464263 TRAV41A0A0B4J266 112 aa12.06□□□□□ -0.48
RAB11FIP3-208ENST00000464263 ANKRD20A5PA0PJZ0 165 aa12.06□□□□□ -0.48
RAB11FIP3-208ENST00000464263 SAA1P0DJI8 122 aaPredicted RBP12.06□□□□□ -0.48
RAB11FIP3-208ENST00000464263 PTBP1P26599 531 aaKnown RBP eCLIP12.06□□□□□ -0.48
RAB11FIP3-208ENST00000464263 ETV6P41212 452 aa12.06□□□□□ -0.48
RAB11FIP3-208ENST00000464263 FOXE3Q13461 319 aa12.06□□□□□ -0.48
RAB11FIP3-208ENST00000464263 FXYD3Q14802 87 aa12.06□□□□□ -0.48
RAB11FIP3-208ENST00000464263 ZNF79Q15937 498 aa12.06□□□□□ -0.48
RAB11FIP3-208ENST00000464263 PRSS8Q16651 343 aa12.06□□□□□ -0.48
RAB11FIP3-208ENST00000464263 IDO2Q6ZQW0 420 aa12.06□□□□□ -0.48
RAB11FIP3-208ENST00000464263 CMTM1Q8IZ96 169 aa12.06□□□□□ -0.48
RAB11FIP3-208ENST00000464263 VKORC1L1Q8N0U8 176 aa12.06□□□□□ -0.48
RAB11FIP3-208ENST00000464263 OR51H1Q8NH63 302 aa12.06□□□□□ -0.48
RAB11FIP3-208ENST00000464263 TERB2Q8NHR7 220 aa12.06□□□□□ -0.48
RAB11FIP3-208ENST00000464263 THAP7Q9BT49 309 aaPredicted RBP12.06□□□□□ -0.48
RAB11FIP3-208ENST00000464263 ZFP57Q9NU63 452 aa12.06□□□□□ -0.48
RAB11FIP3-208ENST00000464263 A0A1W2PRX2 142 aa12.05□□□□□ -0.48
RAB11FIP3-208ENST00000464263 A6NHS1 94 aa12.05□□□□□ -0.48
RAB11FIP3-208ENST00000464263 HRASP01112 189 aa12.05□□□□□ -0.48
RAB11FIP3-208ENST00000464263 IGLV1-40P01703 118 aa12.05□□□□□ -0.48
RAB11FIP3-208ENST00000464263 RLN1P04808 185 aa12.05□□□□□ -0.48
RAB11FIP3-208ENST00000464263 ELANEP08246 267 aa12.05□□□□□ -0.48
RAB11FIP3-208ENST00000464263 PSMB8P28062 276 aa12.05□□□□□ -0.48
RAB11FIP3-208ENST00000464263 MEF2DQ14814 521 aa12.05□□□□□ -0.48
RAB11FIP3-208ENST00000464263 PHLDA2Q53GA4 152 aa12.05□□□□□ -0.48
RAB11FIP3-208ENST00000464263 AKIRIN2Q53H80 203 aa12.05□□□□□ -0.48
RAB11FIP3-208ENST00000464263 PYDC2Q56P42 97 aa12.05□□□□□ -0.48
RAB11FIP3-208ENST00000464263 SLC38A6Q8IZM9 456 aa12.05□□□□□ -0.48
RAB11FIP3-208ENST00000464263 PUSL1Q8N0Z8 303 aaKnown RBP12.05□□□□□ -0.48
RAB11FIP3-208ENST00000464263 FAM110DQ8TAY7 271 aaPredicted RBP12.05□□□□□ -0.48
RAB11FIP3-208ENST00000464263 CD300LFQ8TDQ1 290 aa12.05□□□□□ -0.48
RAB11FIP3-208ENST00000464263 ARPC1AQ92747 370 aa12.05□□□□□ -0.48
RAB11FIP3-208ENST00000464263 MRGPRFQ96AM1 343 aa12.05□□□□□ -0.48
RAB11FIP3-208ENST00000464263 FAM103A1Q9BTL3 118 aaKnown RBP12.05□□□□□ -0.48
RAB11FIP3-208ENST00000464263 SOX15O60248 233 aa12.04□□□□□ -0.48
RAB11FIP3-208ENST00000464263 OR2A4O95047 310 aa12.04□□□□□ -0.48
RAB11FIP3-208ENST00000464263 HPRT1P00492 218 aa12.04□□□□□ -0.48
RAB11FIP3-208ENST00000464263 RPLP1P05386 114 aaKnown RBP12.04□□□□□ -0.48
RAB11FIP3-208ENST00000464263 AKAIN1P0CW23 69 aa12.04□□□□□ -0.48
RAB11FIP3-208ENST00000464263 F2RP25116 425 aa12.04□□□□□ -0.48
RAB11FIP3-208ENST00000464263 RPL23AP62750 156 aaKnown RBP12.04□□□□□ -0.48
RAB11FIP3-208ENST00000464263 TMEM267Q0VDI3 215 aaPredicted RBP12.04□□□□□ -0.48
RAB11FIP3-208ENST00000464263 KIAA0141Q14154 515 aaPredicted RBP12.04□□□□□ -0.48
RAB11FIP3-208ENST00000464263 ZNF585BQ52M93 769 aa12.04□□□□□ -0.48
RAB11FIP3-208ENST00000464263 FAAP20Q6NZ36 180 aa12.04□□□□□ -0.48
RAB11FIP3-208ENST00000464263 LCNL1Q6ZST4 164 aa12.04□□□□□ -0.48
RAB11FIP3-208ENST00000464263 LFNGQ8NES3 379 aa12.04□□□□□ -0.48
RAB11FIP3-208ENST00000464263 OR4C16Q8NGL9 310 aa12.04□□□□□ -0.48
RAB11FIP3-208ENST00000464263 RHOVQ96L33 236 aa12.04□□□□□ -0.48
RAB11FIP3-208ENST00000464263 OR2A7Q96R45 310 aa12.04□□□□□ -0.48
RAB11FIP3-208ENST00000464263 KLK15Q9H2R5 256 aa12.04□□□□□ -0.48
RAB11FIP3-208ENST00000464263 ZNF430Q9H8G1 570 aaPredicted RBP12.04□□□□□ -0.48
RAB11FIP3-208ENST00000464263 PLEKHA2Q9HB19 425 aa12.04□□□□□ -0.48
RAB11FIP3-208ENST00000464263 CNIH1O95406 144 aa12.03□□□□□ -0.48
RAB11FIP3-208ENST00000464263 IL6RP08887 468 aaPredicted RBP12.03□□□□□ -0.48
RAB11FIP3-208ENST00000464263 TAS2R31P59538 309 aa12.03□□□□□ -0.48
RAB11FIP3-208ENST00000464263 GNB1P62873 340 aa12.03□□□□□ -0.48
RAB11FIP3-208ENST00000464263 POU2AF1Q16633 256 aa12.03□□□□□ -0.48
RAB11FIP3-208ENST00000464263 ECSCRQ19T08 205 aa12.03□□□□□ -0.48
RAB11FIP3-208ENST00000464263 SCGB2B2Q4G0G5 96 aa12.03□□□□□ -0.48
RAB11FIP3-208ENST00000464263 CXorf66Q5JRM2 361 aaPredicted RBP12.03□□□□□ -0.48
RAB11FIP3-208ENST00000464263 UNQ5815/PRO19632Q6UWF5 114 aa12.03□□□□□ -0.48
RAB11FIP3-208ENST00000464263 C18orf65Q6ZTR6 163 aa12.03□□□□□ -0.48
RAB11FIP3-208ENST00000464263 TBC1D26Q86UD7 250 aa12.03□□□□□ -0.48
RAB11FIP3-208ENST00000464263 Q8N402 240 aa12.03□□□□□ -0.48
RAB11FIP3-208ENST00000464263 TCTEX1D1Q8N7M0 179 aa12.03□□□□□ -0.48
RAB11FIP3-208ENST00000464263 POC5Q8NA72 575 aa12.03□□□□□ -0.48
RAB11FIP3-208ENST00000464263 VSTM2AQ8TAG5 236 aa12.03□□□□□ -0.48
RAB11FIP3-208ENST00000464263 TMEM167AQ8TBQ9 72 aa12.03□□□□□ -0.48
RAB11FIP3-208ENST00000464263 MYOZ3Q8TDC0 251 aa12.03□□□□□ -0.48
RAB11FIP3-208ENST00000464263 ABHD5Q8WTS1 349 aa12.03□□□□□ -0.48
RAB11FIP3-208ENST00000464263 TRIM63Q969Q1 353 aa12.03□□□□□ -0.48
RAB11FIP3-208ENST00000464263 R3HDM4Q96D70 268 aa12.03□□□□□ -0.48
RAB11FIP3-208ENST00000464263 ZNF486Q96H40 463 aaPredicted RBP12.03□□□□□ -0.48
RAB11FIP3-208ENST00000464263 AIFM2Q9BRQ8 373 aa12.03□□□□□ -0.48
RAB11FIP3-208ENST00000464263 A0A1W2PN81 502 aa12.02□□□□□ -0.49
RAB11FIP3-208ENST00000464263 DISC1C4P0D8 188 aa12.02□□□□□ -0.49
RAB11FIP3-208ENST00000464263 KBTBD11O94819 623 aa12.02□□□□□ -0.49
RAB11FIP3-208ENST00000464263 S1PR2O95136 353 aa12.02□□□□□ -0.49
RAB11FIP3-208ENST00000464263 PGAM2P15259 253 aa12.02□□□□□ -0.49
RAB11FIP3-208ENST00000464263 NQO2P16083 231 aa12.02□□□□□ -0.49
RAB11FIP3-208ENST00000464263 PI3P19957 117 aa12.02□□□□□ -0.49
RAB11FIP3-208ENST00000464263 CHRNA7P36544 502 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms