RNA–Protein interactions for RNA: ENST00000464168.5

USP4-208, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 601 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-208ENST00000464168 NECAP1Q8NC96 275 aa17.05■□□□□ 0.32
USP4-208ENST00000464168 OR10R2Q8NGX6 335 aa17.05■□□□□ 0.32
USP4-208ENST00000464168 DUSP21Q9H596 190 aa17.05■□□□□ 0.32
USP4-208ENST00000464168 RAB27BO00194 218 aa17.04■□□□□ 0.32
USP4-208ENST00000464168 TUSC2O75896 110 aa17.04■□□□□ 0.32
USP4-208ENST00000464168 SAA1P0DJI8 122 aaPredicted RBP17.04■□□□□ 0.32
USP4-208ENST00000464168 EDN2P20800 178 aa17.04■□□□□ 0.32
USP4-208ENST00000464168 RANBP1P43487 201 aa17.04■□□□□ 0.32
USP4-208ENST00000464168 KIR2DS2P43631 304 aa17.04■□□□□ 0.32
USP4-208ENST00000464168 PSMD7P51665 324 aa17.04■□□□□ 0.32
USP4-208ENST00000464168 MLLT11Q13015 90 aaPredicted RBP17.04■□□□□ 0.32
USP4-208ENST00000464168 C10orf55Q5SWW7 151 aa17.04■□□□□ 0.32
USP4-208ENST00000464168 KCTD12Q96CX2 325 aaKnown RBP17.04■□□□□ 0.32
USP4-208ENST00000464168 SPIN2AQ99865 258 aa17.04■□□□□ 0.32
USP4-208ENST00000464168 SPIN2BQ9BPZ2 258 aa17.04■□□□□ 0.32
USP4-208ENST00000464168 A0A075B6Q4 140 aa17.03■□□□□ 0.32
USP4-208ENST00000464168 IGKV1D-8A0A087WSZ0 117 aa17.03■□□□□ 0.32
USP4-208ENST00000464168 C2orf70A6NJV1 201 aa17.03■□□□□ 0.32
USP4-208ENST00000464168 OR11H12B2RN74 326 aa17.03■□□□□ 0.32
USP4-208ENST00000464168 ACTL6BO94805 426 aa17.03■□□□□ 0.32
USP4-208ENST00000464168 FOLR2P14207 255 aa17.03■□□□□ 0.32
USP4-208ENST00000464168 CDK10Q15131 360 aa17.03■□□□□ 0.32
USP4-208ENST00000464168 C15orf32Q32M92 178 aa17.03■□□□□ 0.32
USP4-208ENST00000464168 DYNLRB2Q8TF09 96 aa17.03■□□□□ 0.32
USP4-208ENST00000464168 VCXQ9H320 206 aa17.03■□□□□ 0.32
USP4-208ENST00000464168 SRD5A3Q9H8P0 318 aa17.03■□□□□ 0.32
USP4-208ENST00000464168 ZC4H2Q9NQZ6 224 aa17.03■□□□□ 0.32
USP4-208ENST00000464168 PPP5D1E7EU14 171 aa17.02■□□□□ 0.32
USP4-208ENST00000464168 OR2J3O76001 311 aa17.02■□□□□ 0.32
USP4-208ENST00000464168 HLA-AP01891 365 aaKnown RBP17.02■□□□□ 0.32
USP4-208ENST00000464168 HIST1H1DP16402 221 aaKnown RBP17.02■□□□□ 0.32
USP4-208ENST00000464168 GADD45AP24522 165 aa17.02■□□□□ 0.32
USP4-208ENST00000464168 GUCA2BQ16661 112 aa17.02■□□□□ 0.32
USP4-208ENST00000464168 Q6ZS49 121 aa17.02■□□□□ 0.32
USP4-208ENST00000464168 MMD2Q8IY49 270 aa17.02■□□□□ 0.32
USP4-208ENST00000464168 ACOT13Q9NPJ3 140 aa17.02■□□□□ 0.32
USP4-208ENST00000464168 TPRKBQ9Y3C4 175 aa17.02■□□□□ 0.32
USP4-208ENST00000464168 WDR89Q96FK6 387 aaPredicted RBP17.01■□□□□ 0.31
USP4-208ENST00000464168 MGLLQ99685 303 aa17.01■□□□□ 0.31
USP4-208ENST00000464168 TECRQ9NZ01 308 aaKnown RBP17.01■□□□□ 0.31
USP4-208ENST00000464168 HMX3A6NHT5 357 aa17■□□□□ 0.31
USP4-208ENST00000464168 RGS10O43665 173 aa17■□□□□ 0.31
USP4-208ENST00000464168 CREBL2O60519 120 aaPredicted RBP17■□□□□ 0.31
USP4-208ENST00000464168 FCGR3BO75015 233 aa17■□□□□ 0.31
USP4-208ENST00000464168 GGCTO75223 188 aaKnown RBP17■□□□□ 0.31
USP4-208ENST00000464168 OR2C1O95371 312 aa17■□□□□ 0.31
USP4-208ENST00000464168 TALDO1P37837 337 aa17■□□□□ 0.31
USP4-208ENST00000464168 OR10A3P58181 314 aa17■□□□□ 0.31
USP4-208ENST00000464168 FAM209BQ5JX69 171 aa17■□□□□ 0.31
USP4-208ENST00000464168 SLC25A42Q86VD7 318 aa17■□□□□ 0.31
USP4-208ENST00000464168 DCUN1D5Q9BTE7 237 aa17■□□□□ 0.31
USP4-208ENST00000464168 CENPOQ9BU64 300 aa17■□□□□ 0.31
USP4-208ENST00000464168 ELF5Q9UKW6 265 aaPredicted RBP17■□□□□ 0.31
USP4-208ENST00000464168 IFITM5A6NNB3 132 aa16.99■□□□□ 0.31
USP4-208ENST00000464168 TEX22C9J3V5 150 aa16.99■□□□□ 0.31
USP4-208ENST00000464168 J3QRK9 145 aa16.99■□□□□ 0.31
USP4-208ENST00000464168 LGALS9O00182 355 aa16.99■□□□□ 0.31
USP4-208ENST00000464168 RAB6AP20340 208 aa16.99■□□□□ 0.31
USP4-208ENST00000464168 ARFRP1Q13795 201 aa16.99■□□□□ 0.31
USP4-208ENST00000464168 C19orf35Q6ZS72 473 aa16.99■□□□□ 0.31
USP4-208ENST00000464168 ZNF257Q9Y2Q1 563 aa16.99■□□□□ 0.31
USP4-208ENST00000464168 MAP2K4P45985 399 aa16.98■□□□□ 0.31
USP4-208ENST00000464168 RPL30P62888 115 aaKnown RBP16.98■□□□□ 0.31
USP4-208ENST00000464168 GPHB5Q86YW7 130 aa16.98■□□□□ 0.31
USP4-208ENST00000464168 VKORC1L1Q8N0U8 176 aa16.98■□□□□ 0.31
USP4-208ENST00000464168 ZNF645Q8N7E2 425 aa16.98■□□□□ 0.31
USP4-208ENST00000464168 CCDC90BQ9GZT6 254 aa16.98■□□□□ 0.31
USP4-208ENST00000464168 OR51E2Q9H255 320 aa16.98■□□□□ 0.31
USP4-208ENST00000464168 FBXL7Q9UJT9 491 aa16.98■□□□□ 0.31
USP4-208ENST00000464168 SELENOKQ9Y6D0 94 aa16.98■□□□□ 0.31
USP4-208ENST00000464168 TRAV1-2A0A0B4J238 106 aa16.97■□□□□ 0.31
USP4-208ENST00000464168 ERICH4A6NGS2 130 aa16.97■□□□□ 0.31
USP4-208ENST00000464168 E7EUB6 86 aa16.97■□□□□ 0.31
USP4-208ENST00000464168 IGLV2-14P01704 120 aa16.97■□□□□ 0.31
USP4-208ENST00000464168 IL6RP08887 468 aaPredicted RBP16.97■□□□□ 0.31
USP4-208ENST00000464168 CBLN1P23435 193 aa16.97■□□□□ 0.31
USP4-208ENST00000464168 OR2B11Q5JQS5 317 aa16.97■□□□□ 0.31
USP4-208ENST00000464168 KCTD9Q7L273 389 aa16.97■□□□□ 0.31
USP4-208ENST00000464168 CACNG8Q8WXS5 425 aa16.97■□□□□ 0.31
USP4-208ENST00000464168 PRELID3BQ9Y3B1 194 aa16.97■□□□□ 0.31
USP4-208ENST00000464168 OR2W1Q9Y3N9 320 aa16.97■□□□□ 0.31
USP4-208ENST00000464168 A0A1B0GW64 132 aa16.96■□□□□ 0.31
USP4-208ENST00000464168 METTL21EPA6NDL7 271 aa16.96■□□□□ 0.31
USP4-208ENST00000464168 NPIPB5A8MRT5 1133 aa16.96■□□□□ 0.31
USP4-208ENST00000464168 PDCD5O14737 125 aa16.96■□□□□ 0.31
USP4-208ENST00000464168 IGHV3-23P01764 117 aa16.96■□□□□ 0.31
USP4-208ENST00000464168 HLA-DQB1P01920 261 aa16.96■□□□□ 0.31
USP4-208ENST00000464168 PRSS48Q7RTY5 328 aa16.96■□□□□ 0.31
USP4-208ENST00000464168 CCDC140Q96MF4 163 aa16.96■□□□□ 0.31
USP4-208ENST00000464168 FANCD2OSQ96PS1 177 aa16.96■□□□□ 0.31
USP4-208ENST00000464168 SLC2A9Q9NRM0 540 aa16.96■□□□□ 0.31
USP4-208ENST00000464168 RBMX2Q9Y388 322 aaKnown RBP16.96■□□□□ 0.31
USP4-208ENST00000464168 NDUFB8O95169 186 aa16.95■□□□□ 0.3
USP4-208ENST00000464168 NFYAP23511 347 aaPredicted RBP16.95■□□□□ 0.3
USP4-208ENST00000464168 DTYMKP23919 212 aa16.95■□□□□ 0.3
USP4-208ENST00000464168 CRHBPP24387 322 aa16.95■□□□□ 0.3
USP4-208ENST00000464168 AQP4P55087 323 aa16.95■□□□□ 0.3
USP4-208ENST00000464168 SSX1Q16384 188 aa16.95■□□□□ 0.3
USP4-208ENST00000464168 SLC16A13Q7RTY0 426 aa16.95■□□□□ 0.3
USP4-208ENST00000464168 TMEM61Q8N0U2 210 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms