RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 SNAPC5O75971 98 aa5.07□□□□□ -1.6
SF3B1-206ENST00000462613 IGHG2P01859 326 aa5.07□□□□□ -1.6
SF3B1-206ENST00000462613 IGKV1-16P04430 117 aa5.07□□□□□ -1.6
SF3B1-206ENST00000462613 IL7P13232 177 aa5.07□□□□□ -1.6
SF3B1-206ENST00000462613 AKR1C2P52895 323 aa5.07□□□□□ -1.6
SF3B1-206ENST00000462613 DEFA1P59665 94 aa5.07□□□□□ -1.6
SF3B1-206ENST00000462613 DEFA3P59666 94 aa5.07□□□□□ -1.6
SF3B1-206ENST00000462613 UBE2KP61086 200 aa5.07□□□□□ -1.6
SF3B1-206ENST00000462613 RND3P61587 244 aa5.07□□□□□ -1.6
SF3B1-206ENST00000462613 RELBQ01201 579 aa5.07□□□□□ -1.6
SF3B1-206ENST00000462613 KLF9Q13886 244 aaPredicted RBP5.07□□□□□ -1.6
SF3B1-206ENST00000462613 PSG5Q15238 335 aa5.07□□□□□ -1.6
SF3B1-206ENST00000462613 TRIM16LQ309B1 348 aa5.07□□□□□ -1.6
SF3B1-206ENST00000462613 MZT2BQ6NZ67 158 aa5.07□□□□□ -1.6
SF3B1-206ENST00000462613 SHISA2Q6UWI4 295 aa5.07□□□□□ -1.6
SF3B1-206ENST00000462613 TBC1D26Q86UD7 250 aa5.07□□□□□ -1.6
SF3B1-206ENST00000462613 MRPL41Q8IXM3 137 aaKnown RBP5.07□□□□□ -1.6
SF3B1-206ENST00000462613 MMD2Q8IY49 270 aa5.07□□□□□ -1.6
SF3B1-206ENST00000462613 KLHDC1Q8N7A1 406 aa5.07□□□□□ -1.6
SF3B1-206ENST00000462613 OR4D10Q8NGI6 311 aa5.07□□□□□ -1.6
SF3B1-206ENST00000462613 OR13C8Q8NGS7 320 aa5.07□□□□□ -1.6
SF3B1-206ENST00000462613 OR4A5Q8NH83 315 aa5.07□□□□□ -1.6
SF3B1-206ENST00000462613 RHOVQ96L33 236 aa5.07□□□□□ -1.6
SF3B1-206ENST00000462613 TSC22D3Q99576 134 aa5.07□□□□□ -1.6
SF3B1-206ENST00000462613 PHB2Q99623 299 aa5.07□□□□□ -1.6
SF3B1-206ENST00000462613 ZNF702PQ9H963 129 aa5.07□□□□□ -1.6
SF3B1-206ENST00000462613 AKIP1Q9NQ31 210 aa5.07□□□□□ -1.6
SF3B1-206ENST00000462613 PARP11Q9NR21 331 aa5.07□□□□□ -1.6
SF3B1-206ENST00000462613 SIGLEC9Q9Y336 463 aa5.07□□□□□ -1.6
SF3B1-206ENST00000462613 C3orf85A0A1B0GTC6 90 aa5.06□□□□□ -1.6
SF3B1-206ENST00000462613 PSMB11A5LHX3 300 aa5.06□□□□□ -1.6
SF3B1-206ENST00000462613 MARCH11A6NNE9 402 aa5.06□□□□□ -1.6
SF3B1-206ENST00000462613 H0Y980 276 aa5.06□□□□□ -1.6
SF3B1-206ENST00000462613 CYB5BO43169 146 aa5.06□□□□□ -1.6
SF3B1-206ENST00000462613 FBXO24O75426 580 aa5.06□□□□□ -1.6
SF3B1-206ENST00000462613 RBMXL2O75526 392 aaKnown RBP5.06□□□□□ -1.6
SF3B1-206ENST00000462613 KBTBD11O94819 623 aa5.06□□□□□ -1.6
SF3B1-206ENST00000462613 OR2A4O95047 310 aa5.06□□□□□ -1.6
SF3B1-206ENST00000462613 CA2P00918 260 aa5.06□□□□□ -1.6
SF3B1-206ENST00000462613 IGLV2-14P01704 120 aa5.06□□□□□ -1.6
SF3B1-206ENST00000462613 OPN1MWP04001 364 aa5.06□□□□□ -1.6
SF3B1-206ENST00000462613 AMY1AP04745 511 aa5.06□□□□□ -1.6
SF3B1-206ENST00000462613 ZNF735P0CB33 412 aa5.06□□□□□ -1.6
SF3B1-206ENST00000462613 SAA1P0DJI8 122 aaPredicted RBP5.06□□□□□ -1.6
SF3B1-206ENST00000462613 OPN1MW2P0DN77 364 aa5.06□□□□□ -1.6
SF3B1-206ENST00000462613 OPN1MW3P0DN78 364 aa5.06□□□□□ -1.6
SF3B1-206ENST00000462613 PI3P19957 117 aa5.06□□□□□ -1.6
SF3B1-206ENST00000462613 CNTFRP26992 372 aa5.06□□□□□ -1.6
SF3B1-206ENST00000462613 MAS1LP35410 378 aa5.06□□□□□ -1.6
SF3B1-206ENST00000462613 LPAR6P43657 344 aa5.06□□□□□ -1.6
SF3B1-206ENST00000462613 RAB25P57735 213 aa5.06□□□□□ -1.6
SF3B1-206ENST00000462613 PROK1P58294 105 aa5.06□□□□□ -1.6
SF3B1-206ENST00000462613 LINC00205P59089 165 aa5.06□□□□□ -1.6
SF3B1-206ENST00000462613 GNB1P62873 340 aa5.06□□□□□ -1.6
SF3B1-206ENST00000462613 RPL30P62888 115 aaKnown RBP5.06□□□□□ -1.6
SF3B1-206ENST00000462613 SRPXP78539 464 aa5.06□□□□□ -1.6
SF3B1-206ENST00000462613 DHODHQ02127 395 aa5.06□□□□□ -1.6
SF3B1-206ENST00000462613 FXYD3Q14802 87 aa5.06□□□□□ -1.6
SF3B1-206ENST00000462613 TNXAQ16473 311 aa5.06□□□□□ -1.6
SF3B1-206ENST00000462613 BAK1Q16611 211 aa5.06□□□□□ -1.6
SF3B1-206ENST00000462613 CXorf66Q5JRM2 361 aaPredicted RBP5.06□□□□□ -1.6
SF3B1-206ENST00000462613 KHDC1LQ5JSQ8 128 aa5.06□□□□□ -1.6
SF3B1-206ENST00000462613 TEX38Q6PEX7 206 aa5.06□□□□□ -1.6
SF3B1-206ENST00000462613 ZNF562Q6V9R5 426 aa5.06□□□□□ -1.6
SF3B1-206ENST00000462613 SSX9Q7RTT3 188 aa5.06□□□□□ -1.6
SF3B1-206ENST00000462613 H2BFWTQ7Z2G1 175 aa5.06□□□□□ -1.6
SF3B1-206ENST00000462613 TMED4Q7Z7H5 227 aa5.06□□□□□ -1.6
SF3B1-206ENST00000462613 CENPSQ8N2Z9 138 aa5.06□□□□□ -1.6
SF3B1-206ENST00000462613 STPG2Q8N412 459 aa5.06□□□□□ -1.6
SF3B1-206ENST00000462613 WFDC12Q8WWY7 111 aa5.06□□□□□ -1.6
SF3B1-206ENST00000462613 ARPC1AQ92747 370 aa5.06□□□□□ -1.6
SF3B1-206ENST00000462613 R3HDM4Q96D70 268 aa5.06□□□□□ -1.6
SF3B1-206ENST00000462613 RRNAD1Q96FB5 475 aaKnown RBP5.06□□□□□ -1.6
SF3B1-206ENST00000462613 C5orf30Q96GV9 206 aa5.06□□□□□ -1.6
SF3B1-206ENST00000462613 TMEM68Q96MH6 324 aa5.06□□□□□ -1.6
SF3B1-206ENST00000462613 OR2A7Q96R45 310 aa5.06□□□□□ -1.6
SF3B1-206ENST00000462613 CLCC1Q96S66 551 aa5.06□□□□□ -1.6
SF3B1-206ENST00000462613 MDFIQ99750 246 aa5.06□□□□□ -1.6
SF3B1-206ENST00000462613 SPIN2AQ99865 258 aa5.06□□□□□ -1.6
SF3B1-206ENST00000462613 SPIN2BQ9BPZ2 258 aa5.06□□□□□ -1.6
SF3B1-206ENST00000462613 PDCD10Q9BUL8 212 aa5.06□□□□□ -1.6
SF3B1-206ENST00000462613 ZNF747Q9BV97 191 aa5.06□□□□□ -1.6
SF3B1-206ENST00000462613 COMMD5Q9GZQ3 224 aa5.06□□□□□ -1.6
SF3B1-206ENST00000462613 OR51J1Q9H342 316 aa5.06□□□□□ -1.6
SF3B1-206ENST00000462613 PLSCR3Q9NRY6 295 aa5.06□□□□□ -1.6
SF3B1-206ENST00000462613 SERTAD4Q9NUC0 356 aa5.06□□□□□ -1.6
SF3B1-206ENST00000462613 FKBP11Q9NYL4 201 aa5.06□□□□□ -1.6
SF3B1-206ENST00000462613 BET1LQ9NYM9 111 aa5.06□□□□□ -1.6
SF3B1-206ENST00000462613 COL6A5A8TX70 2615 aa5.05□□□□□ -1.6
SF3B1-206ENST00000462613 FAM240BA0A1B0GVZ2 78 aa5.05□□□□□ -1.6
SF3B1-206ENST00000462613 SH2D7A6NKC9 451 aaPredicted RBP5.05□□□□□ -1.6
SF3B1-206ENST00000462613 M0QZ24 198 aa5.05□□□□□ -1.6
SF3B1-206ENST00000462613 LYRM1O43325 122 aa5.05□□□□□ -1.6
SF3B1-206ENST00000462613 RAMP3O60896 148 aa5.05□□□□□ -1.6
SF3B1-206ENST00000462613 S1PR2O95136 353 aa5.05□□□□□ -1.6
SF3B1-206ENST00000462613 DHFRP00374 187 aa5.05□□□□□ -1.6
SF3B1-206ENST00000462613 KRASP01116 189 aa5.05□□□□□ -1.6
SF3B1-206ENST00000462613 IGF1P05019 195 aa5.05□□□□□ -1.6
SF3B1-206ENST00000462613 AKR1C4P17516 323 aa5.05□□□□□ -1.6
SF3B1-206ENST00000462613 UBE2MP61081 183 aaKnown RBP5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms