RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 ARPC4P59998 168 aa6.12□□□□□ -1.43
CDC42BPA-210ENST00000462553 GNB1P62873 340 aa6.12□□□□□ -1.43
CDC42BPA-210ENST00000462553 CX3CL1P78423 397 aa6.12□□□□□ -1.43
CDC42BPA-210ENST00000462553 RUNX1Q01196 453 aa6.12□□□□□ -1.43
CDC42BPA-210ENST00000462553 KMT2AQ03164 3969 aa6.12□□□□□ -1.43
CDC42BPA-210ENST00000462553 CDK10Q15131 360 aa6.12□□□□□ -1.43
CDC42BPA-210ENST00000462553 OVCH2Q7RTZ1 564 aa6.12□□□□□ -1.43
CDC42BPA-210ENST00000462553 CLVS1Q8IUQ0 354 aaPredicted RBP6.12□□□□□ -1.43
CDC42BPA-210ENST00000462553 MINDY2Q8NBR6 621 aa6.12□□□□□ -1.43
CDC42BPA-210ENST00000462553 OR11H1Q8NG94 326 aa6.12□□□□□ -1.43
CDC42BPA-210ENST00000462553 OR5AP2Q8NGF4 316 aa6.12□□□□□ -1.43
CDC42BPA-210ENST00000462553 DYNC2LI1Q8TCX1 351 aa6.12□□□□□ -1.43
CDC42BPA-210ENST00000462553 HARBI1Q96MB7 349 aa6.12□□□□□ -1.43
CDC42BPA-210ENST00000462553 GPHA2Q96T91 129 aa6.12□□□□□ -1.43
CDC42BPA-210ENST00000462553 TSNAXQ99598 290 aaKnown RBP6.12□□□□□ -1.43
CDC42BPA-210ENST00000462553 GON7Q9BXV9 100 aa6.12□□□□□ -1.43
CDC42BPA-210ENST00000462553 FXYD6Q9H0Q3 95 aa6.12□□□□□ -1.43
CDC42BPA-210ENST00000462553 KLK15Q9H2R5 256 aa6.12□□□□□ -1.43
CDC42BPA-210ENST00000462553 PARP11Q9NR21 331 aa6.12□□□□□ -1.43
CDC42BPA-210ENST00000462553 METTL1Q9UBP6 276 aaKnown RBP6.12□□□□□ -1.43
CDC42BPA-210ENST00000462553 RBM7Q9Y580 266 aaKnown RBP6.12□□□□□ -1.43
CDC42BPA-210ENST00000462553 WSB1Q9Y6I7 421 aa6.12□□□□□ -1.43
CDC42BPA-210ENST00000462553 SMAD5-AS1Q9Y6J3 95 aa6.12□□□□□ -1.43
CDC42BPA-210ENST00000462553 TRAV41A0A0B4J266 112 aa6.11□□□□□ -1.43
CDC42BPA-210ENST00000462553 H3BMQ9 156 aa6.11□□□□□ -1.43
CDC42BPA-210ENST00000462553 CRYZL1O95825 349 aa6.11□□□□□ -1.43
CDC42BPA-210ENST00000462553 PPYP01298 95 aa6.11□□□□□ -1.43
CDC42BPA-210ENST00000462553 FRMD6-AS1P0C7T7 363 aa6.11□□□□□ -1.43
CDC42BPA-210ENST00000462553 OR5H8P0DN80 308 aa6.11□□□□□ -1.43
CDC42BPA-210ENST00000462553 VDAC1P21796 283 aa6.11□□□□□ -1.43
CDC42BPA-210ENST00000462553 FCGR2CP31995 323 aa6.11□□□□□ -1.43
CDC42BPA-210ENST00000462553 PRSS3P35030 304 aa6.11□□□□□ -1.43
CDC42BPA-210ENST00000462553 INSL3P51460 131 aa6.11□□□□□ -1.43
CDC42BPA-210ENST00000462553 RPS16P62249 146 aaKnown RBP6.11□□□□□ -1.43
CDC42BPA-210ENST00000462553 TAGLNQ01995 201 aaKnown RBP6.11□□□□□ -1.43
CDC42BPA-210ENST00000462553 PJVKQ0ZLH3 352 aa6.11□□□□□ -1.43
CDC42BPA-210ENST00000462553 MSMO1Q15800 293 aa6.11□□□□□ -1.43
CDC42BPA-210ENST00000462553 OR2B11Q5JQS5 317 aa6.11□□□□□ -1.43
CDC42BPA-210ENST00000462553 LIN54Q6MZP7 749 aa6.11□□□□□ -1.43
CDC42BPA-210ENST00000462553 KCTD9Q7L273 389 aa6.11□□□□□ -1.43
CDC42BPA-210ENST00000462553 SNX29P2Q8IUI4 249 aa6.11□□□□□ -1.43
CDC42BPA-210ENST00000462553 ZNF491Q8N8L2 437 aa6.11□□□□□ -1.43
CDC42BPA-210ENST00000462553 RAB2BQ8WUD1 216 aa6.11□□□□□ -1.43
CDC42BPA-210ENST00000462553 SECTM1Q8WVN6 248 aa6.11□□□□□ -1.43
CDC42BPA-210ENST00000462553 ISOC1Q96CN7 298 aa6.11□□□□□ -1.43
CDC42BPA-210ENST00000462553 FLYWCH2Q96CP2 140 aaKnown RBP6.11□□□□□ -1.43
CDC42BPA-210ENST00000462553 ADTRPQ96IZ2 230 aa6.11□□□□□ -1.43
CDC42BPA-210ENST00000462553 UBE2E2Q96LR5 201 aa6.11□□□□□ -1.43
CDC42BPA-210ENST00000462553 CLCC1Q96S66 551 aa6.11□□□□□ -1.43
CDC42BPA-210ENST00000462553 BCL7BQ9BQE9 202 aa6.11□□□□□ -1.43
CDC42BPA-210ENST00000462553 IFT46Q9NQC8 304 aa6.11□□□□□ -1.43
CDC42BPA-210ENST00000462553 CCDC59Q9P031 241 aaKnown RBP6.11□□□□□ -1.43
CDC42BPA-210ENST00000462553 ADAM30Q9UKF2 790 aa6.11□□□□□ -1.43
CDC42BPA-210ENST00000462553 NUBP2Q9Y5Y2 271 aa6.11□□□□□ -1.43
CDC42BPA-210ENST00000462553 DNAH10Q8IVF4 4471 aa6.11□□□□□ -1.43
CDC42BPA-210ENST00000462553 SHOXO15266 292 aa6.1□□□□□ -1.43
CDC42BPA-210ENST00000462553 SLC22A5O76082 557 aa6.1□□□□□ -1.43
CDC42BPA-210ENST00000462553 LY86O95711 162 aa6.1□□□□□ -1.43
CDC42BPA-210ENST00000462553 OR8U8P0C7N1 319 aa6.1□□□□□ -1.43
CDC42BPA-210ENST00000462553 SAA1P0DJI8 122 aaPredicted RBP6.1□□□□□ -1.43
CDC42BPA-210ENST00000462553 RRASP10301 218 aa6.1□□□□□ -1.43
CDC42BPA-210ENST00000462553 SPNP16150 400 aa6.1□□□□□ -1.43
CDC42BPA-210ENST00000462553 HRH1P35367 487 aa6.1□□□□□ -1.43
CDC42BPA-210ENST00000462553 RPL5P46777 297 aaKnown RBP6.1□□□□□ -1.43
CDC42BPA-210ENST00000462553 LGALS7P47929 136 aa6.1□□□□□ -1.43
CDC42BPA-210ENST00000462553 RFX2P48378 723 aa6.1□□□□□ -1.43
CDC42BPA-210ENST00000462553 TMBIM6P55061 237 aa6.1□□□□□ -1.43
CDC42BPA-210ENST00000462553 ZNF616Q08AN1 781 aa6.1□□□□□ -1.43
CDC42BPA-210ENST00000462553 DYRK1AQ13627 763 aa6.1□□□□□ -1.43
CDC42BPA-210ENST00000462553 PLGLAQ15195 96 aa6.1□□□□□ -1.43
CDC42BPA-210ENST00000462553 RTL8BQ17RB0 113 aa6.1□□□□□ -1.43
CDC42BPA-210ENST00000462553 ECSCRQ19T08 205 aa6.1□□□□□ -1.43
CDC42BPA-210ENST00000462553 MZT2AQ6P582 158 aa6.1□□□□□ -1.43
CDC42BPA-210ENST00000462553 ZNF562Q6V9R5 426 aa6.1□□□□□ -1.43
CDC42BPA-210ENST00000462553 IDO2Q6ZQW0 420 aa6.1□□□□□ -1.43
CDC42BPA-210ENST00000462553 PPP1R27Q86WC6 154 aa6.1□□□□□ -1.43
CDC42BPA-210ENST00000462553 LYSMD2Q8IV50 215 aa6.1□□□□□ -1.43
CDC42BPA-210ENST00000462553 LAX1Q8IWV1 398 aa6.1□□□□□ -1.43
CDC42BPA-210ENST00000462553 GIMAP1Q8WWP7 306 aa6.1□□□□□ -1.43
CDC42BPA-210ENST00000462553 DCUN1D4Q92564 292 aa6.1□□□□□ -1.43
CDC42BPA-210ENST00000462553 AP3S1Q92572 193 aa6.1□□□□□ -1.43
CDC42BPA-210ENST00000462553 MOB3AQ96BX8 217 aa6.1□□□□□ -1.43
CDC42BPA-210ENST00000462553 OR5B12Q96R08 314 aa6.1□□□□□ -1.43
CDC42BPA-210ENST00000462553 FAM103A1Q9BTL3 118 aaKnown RBP6.1□□□□□ -1.43
CDC42BPA-210ENST00000462553 RBM38Q9H0Z9 239 aaKnown RBP6.1□□□□□ -1.43
CDC42BPA-210ENST00000462553 ALX4Q9H161 411 aaPredicted RBP6.1□□□□□ -1.43
CDC42BPA-210ENST00000462553 SCPEP1Q9HB40 452 aa6.1□□□□□ -1.43
CDC42BPA-210ENST00000462553 CCL28Q9NRJ3 127 aa6.1□□□□□ -1.43
CDC42BPA-210ENST00000462553 EHFQ9NZC4 300 aa6.1□□□□□ -1.43
CDC42BPA-210ENST00000462553 VSIG4Q9Y279 399 aa6.1□□□□□ -1.43
CDC42BPA-210ENST00000462553 MRPS7Q9Y2R9 242 aaKnown RBP6.1□□□□□ -1.43
CDC42BPA-210ENST00000462553 CEPT1Q9Y6K0 416 aa6.1□□□□□ -1.43
CDC42BPA-210ENST00000462553 A3GALT2U3KPV4 340 aa6.1□□□□□ -1.43
CDC42BPA-210ENST00000462553 A0A1W2PN81 502 aa6.09□□□□□ -1.43
CDC42BPA-210ENST00000462553 FAM25AB3EWG3 89 aa6.09□□□□□ -1.43
CDC42BPA-210ENST00000462553 FAM25CB3EWG5 89 aa6.09□□□□□ -1.43
CDC42BPA-210ENST00000462553 FAM25GB3EWG6 89 aa6.09□□□□□ -1.43
CDC42BPA-210ENST00000462553 SULT1C2O00338 296 aa6.09□□□□□ -1.43
CDC42BPA-210ENST00000462553 CTDSP2O14595 271 aa6.09□□□□□ -1.43
CDC42BPA-210ENST00000462553 TNFSF12O43508 249 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms