RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 NTN1O95631 604 aa7.71□□□□□ -1.18
BRCA1-205ENST00000461221 NIT1Q86X76 327 aa7.71□□□□□ -1.18
BRCA1-205ENST00000461221 ATOH7Q8N100 152 aa7.71□□□□□ -1.18
BRCA1-205ENST00000461221 PPP1R3EQ9H7J1 279 aa7.71□□□□□ -1.18
BRCA1-205ENST00000461221 FOXJ2Q9P0K8 574 aa7.71□□□□□ -1.18
BRCA1-205ENST00000461221 TDGF1P13385 188 aa7.71□□□□□ -1.18
BRCA1-205ENST00000461221 UCP3P55916 312 aa7.71□□□□□ -1.18
BRCA1-205ENST00000461221 SRSF5Q13243 272 aaKnown RBP7.71□□□□□ -1.18
BRCA1-205ENST00000461221 OR2K2Q8NGT1 345 aa7.71□□□□□ -1.18
BRCA1-205ENST00000461221 NPFFR1Q9GZQ6 430 aa7.71□□□□□ -1.18
BRCA1-205ENST00000461221 SEMA5BQ9P283 1151 aa7.71□□□□□ -1.18
BRCA1-205ENST00000461221 TOPAZ1Q8N9V7 1692 aa7.71□□□□□ -1.18
BRCA1-205ENST00000461221 TOGARAM1Q9Y4F4 1720 aa7.71□□□□□ -1.18
BRCA1-205ENST00000461221 IGHV1-45A0A0A0MS14 117 aa7.7□□□□□ -1.18
BRCA1-205ENST00000461221 SPAARA0A1B0GVQ0 90 aa7.7□□□□□ -1.18
BRCA1-205ENST00000461221 A0A1W2PPV9 198 aa7.7□□□□□ -1.18
BRCA1-205ENST00000461221 GPX4P36969 197 aaPredicted RBP7.7□□□□□ -1.18
BRCA1-205ENST00000461221 C8orf82Q6P1X6 216 aaPredicted RBP7.7□□□□□ -1.18
BRCA1-205ENST00000461221 FGF11Q92914 225 aa7.7□□□□□ -1.18
BRCA1-205ENST00000461221 FOXC2Q99958 501 aa7.7□□□□□ -1.18
BRCA1-205ENST00000461221 YAE1D1Q9NRH1 226 aa7.7□□□□□ -1.18
BRCA1-205ENST00000461221 YBX2Q9Y2T7 364 aaKnown RBP7.7□□□□□ -1.18
BRCA1-205ENST00000461221 TRAV24A0A0B4J272 114 aa7.7□□□□□ -1.18
BRCA1-205ENST00000461221 GRIFINA4D1Z8 144 aa7.7□□□□□ -1.18
BRCA1-205ENST00000461221 STARD6P59095 220 aa7.7□□□□□ -1.18
BRCA1-205ENST00000461221 LINC00305Q7Z4B0 112 aa7.7□□□□□ -1.18
BRCA1-205ENST00000461221 ZPLD1Q8TCW7 415 aa7.7□□□□□ -1.18
BRCA1-205ENST00000461221 KCNS1Q96KK3 526 aa7.7□□□□□ -1.18
BRCA1-205ENST00000461221 DUX3Q96PT4 197 aa7.7□□□□□ -1.18
BRCA1-205ENST00000461221 SPCS1Q9Y6A9 102 aa7.7□□□□□ -1.18
BRCA1-205ENST00000461221 TJP1Q07157 1748 aa7.7□□□□□ -1.18
BRCA1-205ENST00000461221 TRAV9-1A0A075B6T8 112 aa7.7□□□□□ -1.18
BRCA1-205ENST00000461221 CTAG1AP78358 180 aa7.7□□□□□ -1.18
BRCA1-205ENST00000461221 CD69Q07108 199 aa7.7□□□□□ -1.18
BRCA1-205ENST00000461221 FMC1Q96HJ9 113 aa7.7□□□□□ -1.18
BRCA1-205ENST00000461221 A0A0G2JLM5 398 aa7.7□□□□□ -1.18
BRCA1-205ENST00000461221 HLA-DQB1P01920 261 aa7.7□□□□□ -1.18
BRCA1-205ENST00000461221 ACSF3Q4G176 576 aaPredicted RBP7.7□□□□□ -1.18
BRCA1-205ENST00000461221 LIMS2Q7Z4I7 341 aa7.7□□□□□ -1.18
BRCA1-205ENST00000461221 APCDD1LQ8NCL9 501 aa7.7□□□□□ -1.18
BRCA1-205ENST00000461221 NPIPB3Q92617 1050 aa7.7□□□□□ -1.18
BRCA1-205ENST00000461221 GGACTQ9BVM4 153 aa7.7□□□□□ -1.18
BRCA1-205ENST00000461221 IL36BQ9NZH7 164 aa7.7□□□□□ -1.18
BRCA1-205ENST00000461221 MPTX1A8MV57 137 aa7.69□□□□□ -1.18
BRCA1-205ENST00000461221 EIF3GO75821 320 aaKnown RBP eCLIP7.69□□□□□ -1.18
BRCA1-205ENST00000461221 TMEM50AO95807 157 aa7.69□□□□□ -1.18
BRCA1-205ENST00000461221 APOHP02749 345 aaPredicted RBP7.69□□□□□ -1.18
BRCA1-205ENST00000461221 TRGV3P03979 118 aa7.69□□□□□ -1.18
BRCA1-205ENST00000461221 REG1AP05451 166 aa7.69□□□□□ -1.18
BRCA1-205ENST00000461221 FTH1P19P0C7X4 201 aa7.69□□□□□ -1.18
BRCA1-205ENST00000461221 ZNF826PQ6ZT77 177 aa7.69□□□□□ -1.18
BRCA1-205ENST00000461221 LRTM2Q8N967 370 aa7.69□□□□□ -1.18
BRCA1-205ENST00000461221 SDF2L1Q9HCN8 221 aa7.69□□□□□ -1.18
BRCA1-205ENST00000461221 NXT2Q9NPJ8 142 aaKnown RBP7.69□□□□□ -1.18
BRCA1-205ENST00000461221 SIGLEC1Q9BZZ2 1709 aa7.69□□□□□ -1.18
BRCA1-205ENST00000461221 FOXS1O43638 330 aa7.69□□□□□ -1.18
BRCA1-205ENST00000461221 IL9P15248 144 aa7.69□□□□□ -1.18
BRCA1-205ENST00000461221 ATP5J2P56134 94 aa7.69□□□□□ -1.18
BRCA1-205ENST00000461221 TEX45Q8NA69 505 aa7.69□□□□□ -1.18
BRCA1-205ENST00000461221 TOMM7Q9P0U1 55 aa7.69□□□□□ -1.18
BRCA1-205ENST00000461221 SDK1Q7Z5N4 2213 aa7.69□□□□□ -1.18
BRCA1-205ENST00000461221 J3QW42 95 aa7.69□□□□□ -1.18
BRCA1-205ENST00000461221 CA1P00915 261 aaPredicted RBP7.69□□□□□ -1.18
BRCA1-205ENST00000461221 WDR82Q6UXN9 313 aa7.69□□□□□ -1.18
BRCA1-205ENST00000461221 BHLHA9Q7RTU4 235 aa7.69□□□□□ -1.18
BRCA1-205ENST00000461221 KCNK17Q96T54 332 aa7.69□□□□□ -1.18
BRCA1-205ENST00000461221 M0R381 172 aa7.69□□□□□ -1.18
BRCA1-205ENST00000461221 PEX7O00628 323 aa7.69□□□□□ -1.18
BRCA1-205ENST00000461221 MALP21145 153 aa7.69□□□□□ -1.18
BRCA1-205ENST00000461221 TMEM187Q14656 261 aa7.69□□□□□ -1.18
BRCA1-205ENST00000461221 IGHV1-69-2A0A0G2JMI3 117 aa7.69□□□□□ -1.18
BRCA1-205ENST00000461221 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.69□□□□□ -1.18
BRCA1-205ENST00000461221 ICAM4Q14773 271 aa7.69□□□□□ -1.18
BRCA1-205ENST00000461221 PNKDQ8N490 385 aa7.69□□□□□ -1.18
BRCA1-205ENST00000461221 C18orf15Q96N68 181 aa7.69□□□□□ -1.18
BRCA1-205ENST00000461221 CCL19Q99731 98 aa7.69□□□□□ -1.18
BRCA1-205ENST00000461221 SSBP3Q9BWW4 388 aaPredicted RBP7.69□□□□□ -1.18
BRCA1-205ENST00000461221 G6PC2Q9NQR9 355 aa7.69□□□□□ -1.18
BRCA1-205ENST00000461221 TRBV5-7A0A0A0MS05 114 aa7.68□□□□□ -1.18
BRCA1-205ENST00000461221 IGKV3-20P01619 116 aa7.68□□□□□ -1.18
BRCA1-205ENST00000461221 IL6RP08887 468 aaPredicted RBP7.68□□□□□ -1.18
BRCA1-205ENST00000461221 TBR1Q16650 682 aa7.68□□□□□ -1.18
BRCA1-205ENST00000461221 CYB5R2Q6BCY4 276 aa7.68□□□□□ -1.18
BRCA1-205ENST00000461221 LINC00518Q8N0U6 118 aa7.68□□□□□ -1.18
BRCA1-205ENST00000461221 OR5AN1Q8NGI8 311 aa7.68□□□□□ -1.18
BRCA1-205ENST00000461221 C5orf30Q96GV9 206 aa7.68□□□□□ -1.18
BRCA1-205ENST00000461221 WDYHV1Q96HA8 205 aa7.68□□□□□ -1.18
BRCA1-205ENST00000461221 DTX4Q9Y2E6 619 aa7.68□□□□□ -1.18
BRCA1-205ENST00000461221 PLCH1Q4KWH8 1693 aa7.68□□□□□ -1.18
BRCA1-205ENST00000461221 TRAV8-2A0A0B4J237 113 aa7.68□□□□□ -1.18
BRCA1-205ENST00000461221 A0A1B0GUT8 65 aa7.68□□□□□ -1.18
BRCA1-205ENST00000461221 B9A039 149 aa7.68□□□□□ -1.18
BRCA1-205ENST00000461221 H3BTX0 84 aa7.68□□□□□ -1.18
BRCA1-205ENST00000461221 NKX2-8O15522 239 aa7.68□□□□□ -1.18
BRCA1-205ENST00000461221 GPR183P32249 361 aa7.68□□□□□ -1.18
BRCA1-205ENST00000461221 CIARTQ8N365 385 aaPredicted RBP7.68□□□□□ -1.18
BRCA1-205ENST00000461221 OR11H4Q8NGC9 324 aa7.68□□□□□ -1.18
BRCA1-205ENST00000461221 ZNF501Q96CX3 271 aaPredicted RBP7.68□□□□□ -1.18
BRCA1-205ENST00000461221 IGKV1D-16P01601 117 aa7.68□□□□□ -1.18
BRCA1-205ENST00000461221 Q96M66 194 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms